BLASTX nr result

ID: Coptis24_contig00017677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017677
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31954.3| unnamed protein product [Vitis vinifera]              149   4e-34
ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256...   149   4e-34
ref|XP_003517979.1| PREDICTED: uncharacterized protein LOC100812...   147   3e-33
ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...   147   3e-33
ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|2...   145   7e-33

>emb|CBI31954.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  149 bits (377), Expect = 4e-34
 Identities = 79/161 (49%), Positives = 95/161 (59%)
 Frame = -1

Query: 690 PSQPRPDDTTIDISGGWLISGTPVGLHDPRFVTMAAAERRLLEAQYDEYAGTNASGSXXX 511
           P  P P+DT IDI GGW ISGTP+ L DPR + MA AER  LEA+YDEY  TNA+G+   
Sbjct: 428 PPPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNATGAAFC 487

Query: 510 XXXXXXXXXXXXXXXXLETTSSNNEDDEDVSTFFSIFMLRAFGFLLPFYIMACAISVLQX 331
                           L  T ++ + D+D STFFS+F+LRA GFLLP YIMA AIS+LQ 
Sbjct: 488 RSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISILQR 547

Query: 330 XXXXXXXXXXXXXXXAFVLQSGQEQGLHFTIVPGPVVTHPE 208
                          AFVLQSGQ +GL FT+ P  VV  P+
Sbjct: 548 RRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQ 588


>ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256824 [Vitis vinifera]
           gi|147785386|emb|CAN70908.1| hypothetical protein
           VITISV_040117 [Vitis vinifera]
          Length = 279

 Score =  149 bits (377), Expect = 4e-34
 Identities = 79/161 (49%), Positives = 95/161 (59%)
 Frame = -1

Query: 690 PSQPRPDDTTIDISGGWLISGTPVGLHDPRFVTMAAAERRLLEAQYDEYAGTNASGSXXX 511
           P  P P+DT IDI GGW ISGTP+ L DPR + MA AER  LEA+YDEY  TNA+G+   
Sbjct: 116 PPPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNATGAAFC 175

Query: 510 XXXXXXXXXXXXXXXXLETTSSNNEDDEDVSTFFSIFMLRAFGFLLPFYIMACAISVLQX 331
                           L  T ++ + D+D STFFS+F+LRA GFLLP YIMA AIS+LQ 
Sbjct: 176 RSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISILQR 235

Query: 330 XXXXXXXXXXXXXXXAFVLQSGQEQGLHFTIVPGPVVTHPE 208
                          AFVLQSGQ +GL FT+ P  VV  P+
Sbjct: 236 RRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQ 276


>ref|XP_003517979.1| PREDICTED: uncharacterized protein LOC100812998 [Glycine max]
          Length = 286

 Score =  147 bits (370), Expect = 3e-33
 Identities = 79/161 (49%), Positives = 97/161 (60%)
 Frame = -1

Query: 690 PSQPRPDDTTIDISGGWLISGTPVGLHDPRFVTMAAAERRLLEAQYDEYAGTNASGSXXX 511
           P +P P++TTIDI GGW ISGTP+ L DPR + +A AER+ L+A+YDEYA +NASG+   
Sbjct: 125 PPRPNPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNASGAAFC 184

Query: 510 XXXXXXXXXXXXXXXXLETTSSNNEDDEDVSTFFSIFMLRAFGFLLPFYIMACAISVLQX 331
                           L  +  +N DD D S+FFS+F+LRA GFLLP YIMA AIS+LQ 
Sbjct: 185 RSAALILMALLLLRHALSVSDGDNSDD-DPSSFFSLFLLRAAGFLLPCYIMAWAISILQR 243

Query: 330 XXXXXXXXXXXXXXXAFVLQSGQEQGLHFTIVPGPVVTHPE 208
                          AFVLQSGQ +GL F I PGP   H E
Sbjct: 244 RRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPGPPTLHQE 284


>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223538320|gb|EEF39927.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 283

 Score =  147 bits (370), Expect = 3e-33
 Identities = 83/160 (51%), Positives = 98/160 (61%), Gaps = 1/160 (0%)
 Frame = -1

Query: 681 PRPDDTTIDISGGWLISGTPVGLHDPRFVTMAAAERRLLEAQYDEYAGTNASGSXXXXXX 502
           P+ +DT IDI GGW ISGTP+ L DPR + +A AER  LEA+YDEYA +NASG+      
Sbjct: 125 PQAEDTAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEAEYDEYAASNASGAAFCRSA 184

Query: 501 XXXXXXXXXXXXXLETTSSNNEDDEDVSTFFSIFMLRAFGFLLPFYIMACAISVLQXXXX 322
                        L  T +  + D+DVSTFFS+F+LRA GFLLP YIMA AIS+LQ    
Sbjct: 185 ALILMALLLLRHALTVTDA--DGDDDVSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQ 242

Query: 321 XXXXXXXXXXXXAFVLQSGQEQGLHFTIVPGPVVT-HPEP 205
                       AFVLQSGQ +GLHFTI  GP VT H EP
Sbjct: 243 RQEAAALAATQVAFVLQSGQHRGLHFTIASGPQVTAHQEP 282


>ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|222864092|gb|EEF01223.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  145 bits (366), Expect = 7e-33
 Identities = 83/163 (50%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
 Frame = -1

Query: 690 PSQPRPDDTTIDISGGWLISGTPVGLHDPRFVTMAAAERRLLEAQYDEYAGTNASGSXXX 511
           P  P  +DT IDI GGW ISGT + L DPR + +A AER  LEA+YD+YA +NASG+   
Sbjct: 119 PRPPHSEDTGIDIGGGWTISGTQLDLRDPRLLAIAEAERHFLEAEYDDYAASNASGAAFC 178

Query: 510 XXXXXXXXXXXXXXXXLETTSSNNEDDEDVSTFFSIFMLRAFGFLLPFYIMACAISVLQX 331
                           L  T S+ ED  DVS FFS+F+LRA GFLLP YIMA AIS+LQ 
Sbjct: 179 RSVALILMALLLLRHALTATDSDGED--DVSAFFSLFLLRAAGFLLPCYIMAWAISILQR 236

Query: 330 XXXXXXXXXXXXXXXAFVLQSGQEQGLHFTIVPGPVVT-HPEP 205
                          AFVLQSGQ++GL FTI PGP VT H EP
Sbjct: 237 RRQRQEAAALAATQVAFVLQSGQQRGLQFTIAPGPTVTPHQEP 279


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