BLASTX nr result

ID: Coptis24_contig00017675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017675
         (2659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269134.1| PREDICTED: vesicle-associated membrane prote...   357   1e-95
ref|XP_003555880.1| PREDICTED: vesicle-associated membrane prote...   350   1e-93
ref|XP_003536697.1| PREDICTED: vesicle-associated membrane prote...   349   2e-93
gb|ACU23563.1| unknown [Glycine max]                                  348   6e-93
ref|XP_002515759.1| Vesicle-associated membrane protein, putativ...   345   4e-92

>ref|XP_002269134.1| PREDICTED: vesicle-associated membrane protein 727 isoform 1 [Vitis
            vinifera] gi|296086578|emb|CBI32213.3| unnamed protein
            product [Vitis vinifera]
          Length = 239

 Score =  357 bits (915), Expect = 1e-95
 Identities = 171/239 (71%), Positives = 201/239 (84%), Gaps = 2/239 (0%)
 Frame = +2

Query: 1844 MSERGLIYSFVSKGTVVLAEYTAFSGNFSTIAVQCLQKLPTNSNKYTYSCDGHTFNFLVD 2023
            MS++GLIYSFV+KGTVVLAE+T+FSGNFSTIAVQCLQKLP+NS+KYTYSCDGHTFNFL+D
Sbjct: 1    MSQKGLIYSFVAKGTVVLAEHTSFSGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLID 60

Query: 2024 NGFVFLVVAHEVVGRGLPFTFLQRLKDEFRRSYGARIGIEGPHPLAXXXXXX--LFEDTF 2197
            +GFVFLVVA E  GRG PF FL+R+KD+F++ YG  I  +GPHPLA        LFED F
Sbjct: 61   SGFVFLVVADESAGRGAPFVFLERVKDDFKQRYGGSIRSDGPHPLADEDDDDDDLFEDRF 120

Query: 2198 GIAYNLDKEFGPRIKQQMDYCTSHPEEISKISKIKAQMTEVKGIMMENIDKVLERGEKIE 2377
             IAYNLD+EFGP++K+ M YC +HPEEISK+SK+KAQ+TEVKGIMM+NI+KVL+RGE+IE
Sbjct: 121  SIAYNLDREFGPKLKEHMQYCMNHPEEISKLSKLKAQITEVKGIMMDNIEKVLDRGERIE 180

Query: 2378 VLVDKTENLQFQTDSFHRQGRQLRRKMWLQNLKLKLMVGGXXXXXXXXXXXXXCRGFKC 2554
            +LVDKTENLQFQ DSF RQGRQLRRKMWLQNL+LKLMVGG             C+GFKC
Sbjct: 181  LLVDKTENLQFQADSFQRQGRQLRRKMWLQNLRLKLMVGGIVLVLIIILWLIACKGFKC 239


>ref|XP_003555880.1| PREDICTED: vesicle-associated membrane protein 727-like [Glycine max]
          Length = 238

 Score =  350 bits (897), Expect = 1e-93
 Identities = 170/238 (71%), Positives = 197/238 (82%), Gaps = 1/238 (0%)
 Frame = +2

Query: 1844 MSERGLIYSFVSKGTVVLAEYTAFSGNFSTIAVQCLQKLPTNSNKYTYSCDGHTFNFLVD 2023
            MS+RGLIYSFV+KGTVVLAE+T ++GNFSTIAVQCLQKLP+NS+KYTYSCDGHTFNFL+D
Sbjct: 1    MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLLD 60

Query: 2024 NGFVFLVVAHEVVGRGLPFTFLQRLKDEFRRSYGARIGIEGPHPLAXXXXXX-LFEDTFG 2200
             GFVFLVVA E  GR +PF FL+R+KD+F + YGA I  EG HPLA       LFED F 
Sbjct: 61   TGFVFLVVADESAGRSVPFVFLERVKDDFMKRYGASIKNEGAHPLADDDDDDDLFEDRFS 120

Query: 2201 IAYNLDKEFGPRIKQQMDYCTSHPEEISKISKIKAQMTEVKGIMMENIDKVLERGEKIEV 2380
            IAYNLD+EFGP +K+ M YC +HPEE+SK+SK+KAQ+TEVKGIMM+NI+KVL+RGEKIE+
Sbjct: 121  IAYNLDREFGPALKEHMQYCMNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180

Query: 2381 LVDKTENLQFQTDSFHRQGRQLRRKMWLQNLKLKLMVGGXXXXXXXXXXXXXCRGFKC 2554
            LVDKTENLQFQ DSF RQGRQLRRKMWLQNL++KLMVGG             CRGFKC
Sbjct: 181  LVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGGILILIIILWVIACRGFKC 238


>ref|XP_003536697.1| PREDICTED: vesicle-associated membrane protein 727-like [Glycine max]
          Length = 238

 Score =  349 bits (896), Expect = 2e-93
 Identities = 169/238 (71%), Positives = 198/238 (83%), Gaps = 1/238 (0%)
 Frame = +2

Query: 1844 MSERGLIYSFVSKGTVVLAEYTAFSGNFSTIAVQCLQKLPTNSNKYTYSCDGHTFNFLVD 2023
            MS+RGLIYSFV+KGTVVLAE+T ++GNFSTIAVQCLQKLP+NS+KYTYSCDGHTFNFL+D
Sbjct: 1    MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLLD 60

Query: 2024 NGFVFLVVAHEVVGRGLPFTFLQRLKDEFRRSYGARIGIEGPHPLAXXXXXX-LFEDTFG 2200
            NGFVFLVVA E +GR +PF FL+R+KD+F + YGA I  +G HPLA       LFED F 
Sbjct: 61   NGFVFLVVADESIGRSVPFVFLERVKDDFMKRYGASIKNDGAHPLADDEDDDDLFEDRFS 120

Query: 2201 IAYNLDKEFGPRIKQQMDYCTSHPEEISKISKIKAQMTEVKGIMMENIDKVLERGEKIEV 2380
            IAYNLD+EFGP +K+ M YC +HPEE+SK+SK+KAQ+TEVKGIMM+NI+KVL+RGEKIE+
Sbjct: 121  IAYNLDREFGPALKEHMQYCMNHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIEL 180

Query: 2381 LVDKTENLQFQTDSFHRQGRQLRRKMWLQNLKLKLMVGGXXXXXXXXXXXXXCRGFKC 2554
            LVDKTENLQFQ DSF RQGRQLRRKMWLQNL++KLMVGG             C GFKC
Sbjct: 181  LVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGGILILIIILWVIACGGFKC 238


>gb|ACU23563.1| unknown [Glycine max]
          Length = 238

 Score =  348 bits (892), Expect = 6e-93
 Identities = 168/238 (70%), Positives = 196/238 (82%), Gaps = 1/238 (0%)
 Frame = +2

Query: 1844 MSERGLIYSFVSKGTVVLAEYTAFSGNFSTIAVQCLQKLPTNSNKYTYSCDGHTFNFLVD 2023
            MS+RGLIYSFV+KGTVVLAE+T ++GNFSTIAVQCLQKLP+NS+KYTYSCDGHTFNFL+D
Sbjct: 1    MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLLD 60

Query: 2024 NGFVFLVVAHEVVGRGLPFTFLQRLKDEFRRSYGARIGIEGPHPLAXXXXXX-LFEDTFG 2200
             GFVFLVVA E  GR +PF FL+R+KD+F + YG  I  EG HPLA       LFED F 
Sbjct: 61   TGFVFLVVADESAGRSVPFVFLERVKDDFMKRYGVSIKNEGAHPLADDDDDDDLFEDRFS 120

Query: 2201 IAYNLDKEFGPRIKQQMDYCTSHPEEISKISKIKAQMTEVKGIMMENIDKVLERGEKIEV 2380
            IAYNLD+EFGP +K+ M YC +HPEE+SK+SK+KAQ+TEVKG+MM+NI+KVL+RGEKIE+
Sbjct: 121  IAYNLDREFGPALKEHMQYCMNHPEEMSKLSKLKAQITEVKGVMMDNIEKVLDRGEKIEL 180

Query: 2381 LVDKTENLQFQTDSFHRQGRQLRRKMWLQNLKLKLMVGGXXXXXXXXXXXXXCRGFKC 2554
            LVDKTENLQFQ DSF RQGRQLRRKMWLQNL++KLMVGG             CRGFKC
Sbjct: 181  LVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGGILILIIILWVIACRGFKC 238


>ref|XP_002515759.1| Vesicle-associated membrane protein, putative [Ricinus communis]
            gi|223545087|gb|EEF46598.1| Vesicle-associated membrane
            protein, putative [Ricinus communis]
          Length = 237

 Score =  345 bits (885), Expect = 4e-92
 Identities = 168/238 (70%), Positives = 198/238 (83%), Gaps = 1/238 (0%)
 Frame = +2

Query: 1844 MSERGLIYSFVSKGTVVLAEYTAFSGNFSTIAVQCLQKLPTNSNKYTYSCDGHTFNFLVD 2023
            MS++GLIYSFV+KGTVVLAE+T +SGNFSTIAVQCLQKLP+NS+KYTYSCDGHTFNFL+D
Sbjct: 1    MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPSNSSKYTYSCDGHTFNFLID 60

Query: 2024 NGFVFLVVAHEVVGRGLPFTFLQRLKDEFRRSYGARIGIEGPHPLAXXXXXX-LFEDTFG 2200
            +GFVFLVVA E  GR +PF FL+R+KD+F++ YGA I  E  HPLA       LF D F 
Sbjct: 61   SGFVFLVVADESTGRSVPFVFLERVKDDFKQRYGAGINNEA-HPLADDDDDDDLFADRFS 119

Query: 2201 IAYNLDKEFGPRIKQQMDYCTSHPEEISKISKIKAQMTEVKGIMMENIDKVLERGEKIEV 2380
            IAYNLD++FGPR+K+ M YC SHPEEISK+SK+KAQ+TEVKGIMM+NI+KVL+RGE+IE+
Sbjct: 120  IAYNLDRDFGPRLKEHMQYCMSHPEEISKLSKLKAQITEVKGIMMDNIEKVLDRGERIEL 179

Query: 2381 LVDKTENLQFQTDSFHRQGRQLRRKMWLQNLKLKLMVGGXXXXXXXXXXXXXCRGFKC 2554
            LVDKTENLQFQ DSF RQGRQLRRKMWLQNL++KLM+GG             CRGFKC
Sbjct: 180  LVDKTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMIGGAILVLIVILWLLVCRGFKC 237


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