BLASTX nr result

ID: Coptis24_contig00017672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017672
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866311.1| hypothetical protein ARALYDRAFT_919128 [Arab...   144   2e-32
dbj|BAH19966.1| AT5G59250 [Arabidopsis thaliana]                      144   2e-32
dbj|BAE98379.1| D-xylose-H+ symporter - like protein [Arabidopsi...   144   2e-32
ref|NP_200733.2| D-xylose-proton symporter-like 3 [Arabidopsis t...   144   2e-32
ref|XP_004173923.1| PREDICTED: D-xylose-proton symporter-like 3,...   140   4e-31

>ref|XP_002866311.1| hypothetical protein ARALYDRAFT_919128 [Arabidopsis lyrata subsp.
           lyrata] gi|297312146|gb|EFH42570.1| hypothetical protein
           ARALYDRAFT_919128 [Arabidopsis lyrata subsp. lyrata]
          Length = 559

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = -3

Query: 460 QISFGPISWLMVSEIFPIRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGTENLFLLFA 281
           QISFGPISWLMVSEIFP+RTRGRGISLAVLTNFGSNA+VTFAFSPLKE LG ENLFLLF 
Sbjct: 469 QISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEFLGAENLFLLFG 528

Query: 280 GIALISLLFIVFVVPETKG 224
           GIAL+SLLF++ VVPETKG
Sbjct: 529 GIALVSLLFVILVVPETKG 547


>dbj|BAH19966.1| AT5G59250 [Arabidopsis thaliana]
          Length = 415

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = -3

Query: 460 QISFGPISWLMVSEIFPIRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGTENLFLLFA 281
           QISFGPISWLMVSEIFP+RTRGRGISLAVLTNFGSNA+VTFAFSPLKE LG ENLFLLF 
Sbjct: 325 QISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEFLGAENLFLLFG 384

Query: 280 GIALISLLFIVFVVPETKG 224
           GIAL+SLLF++ VVPETKG
Sbjct: 385 GIALVSLLFVILVVPETKG 403


>dbj|BAE98379.1| D-xylose-H+ symporter - like protein [Arabidopsis thaliana]
          Length = 558

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = -3

Query: 460 QISFGPISWLMVSEIFPIRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGTENLFLLFA 281
           QISFGPISWLMVSEIFP+RTRGRGISLAVLTNFGSNA+VTFAFSPLKE LG ENLFLLF 
Sbjct: 468 QISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEFLGAENLFLLFG 527

Query: 280 GIALISLLFIVFVVPETKG 224
           GIAL+SLLF++ VVPETKG
Sbjct: 528 GIALVSLLFVILVVPETKG 546


>ref|NP_200733.2| D-xylose-proton symporter-like 3 [Arabidopsis thaliana]
           gi|117940085|sp|Q0WWW9.2|XYLL3_ARATH RecName:
           Full=D-xylose-proton symporter-like 3, chloroplastic;
           Flags: Precursor gi|9759246|dbj|BAB09770.1| sugar
           transporter-like protein [Arabidopsis thaliana]
           gi|51536478|gb|AAU05477.1| At5g59250 [Arabidopsis
           thaliana] gi|56381949|gb|AAV85693.1| At5g59250
           [Arabidopsis thaliana] gi|332009779|gb|AED97162.1|
           D-xylose-proton symporter-like 3 [Arabidopsis thaliana]
          Length = 558

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = -3

Query: 460 QISFGPISWLMVSEIFPIRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGTENLFLLFA 281
           QISFGPISWLMVSEIFP+RTRGRGISLAVLTNFGSNA+VTFAFSPLKE LG ENLFLLF 
Sbjct: 468 QISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEFLGAENLFLLFG 527

Query: 280 GIALISLLFIVFVVPETKG 224
           GIAL+SLLF++ VVPETKG
Sbjct: 528 GIALVSLLFVILVVPETKG 546


>ref|XP_004173923.1| PREDICTED: D-xylose-proton symporter-like 3, chloroplastic-like,
           partial [Cucumis sativus]
          Length = 171

 Score =  140 bits (352), Expect = 4e-31
 Identities = 69/79 (87%), Positives = 74/79 (93%)
 Frame = -3

Query: 460 QISFGPISWLMVSEIFPIRTRGRGISLAVLTNFGSNALVTFAFSPLKELLGTENLFLLFA 281
           QISFGPISWLMVSEIFP+RTRG+GISLAVLTNFGSNA+VTFAFSPLKELLG ENLFLLF 
Sbjct: 81  QISFGPISWLMVSEIFPLRTRGKGISLAVLTNFGSNAIVTFAFSPLKELLGAENLFLLFG 140

Query: 280 GIALISLLFIVFVVPETKG 224
            IAL+SLLF+V  VPETKG
Sbjct: 141 AIALLSLLFVVLKVPETKG 159


Top