BLASTX nr result

ID: Coptis24_contig00017661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017661
         (1167 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|2...    97   6e-18
ref|XP_002324170.1| predicted protein [Populus trichocarpa] gi|2...    85   3e-14
ref|XP_002299858.1| predicted protein [Populus trichocarpa] gi|2...    81   6e-13
ref|XP_002525486.1| conserved hypothetical protein [Ricinus comm...    67   1e-08

>ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|222847563|gb|EEE85110.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 50/118 (42%), Positives = 77/118 (65%)
 Frame = -3

Query: 355 VAEPTAEGLTQAAYTAALKKYNEYTSRDNVARIAILGTMRNDFMMRYDGLGSAKELWEAV 176
           +AEP  +G T A +   ++ Y  Y  +D VARI +L +MRND M+R++   S + +W+AV
Sbjct: 1   MAEPE-QGNT-AQHRLDMEAYQTYKRKDRVARILMLSSMRNDIMLRFERHRSTQSVWDAV 58

Query: 175 KADLGGTTTAQLRRLQMSFDKFIKLPHTSMTQHCTVMRNMVAELAQAEQVLSNEQQIQ 2
           K   GGT+T +LR+L + FD + K  + +M QH TVM NM++EL   E  +++EQQ+Q
Sbjct: 59  KIQYGGTSTTRLRQLTLKFDGYKKCQNQTMRQHLTVMSNMISELKGVEHEMTDEQQVQ 116


>ref|XP_002324170.1| predicted protein [Populus trichocarpa] gi|222865604|gb|EEF02735.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 45/118 (38%), Positives = 73/118 (61%)
 Frame = -3

Query: 355 VAEPTAEGLTQAAYTAALKKYNEYTSRDNVARIAILGTMRNDFMMRYDGLGSAKELWEAV 176
           +AEP  E    A +   ++ Y  +  +D VARI +L +M ND M+ ++   SA+ +W+AV
Sbjct: 1   MAEP--EQGNAAQHMLDMEAYQTHKRKDRVARILMLRSMSNDIMLCFERHRSAQSVWDAV 58

Query: 175 KADLGGTTTAQLRRLQMSFDKFIKLPHTSMTQHCTVMRNMVAELAQAEQVLSNEQQIQ 2
           K   GGT+T + R+L + FD + K  + +M Q+ T+M NM++EL  A   +++EQQIQ
Sbjct: 59  KIQYGGTSTTRFRQLTLKFDGYKKHQNQTMRQYLTIMSNMISELKGAGHEMTDEQQIQ 116


>ref|XP_002299858.1| predicted protein [Populus trichocarpa] gi|222847116|gb|EEE84663.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 38/101 (37%), Positives = 65/101 (64%)
 Frame = -3

Query: 304 LKKYNEYTSRDNVARIAILGTMRNDFMMRYDGLGSAKELWEAVKADLGGTTTAQLRRLQM 125
           ++ Y  Y  +D+VARI +L +MRND M+R++   S +  W+A+K   G T+T +L +L +
Sbjct: 4   METYQTYKCKDHVARILMLSSMRNDIMLRFERHRSIQAAWDAIKIQYGETSTTRLCQLIL 63

Query: 124 SFDKFIKLPHTSMTQHCTVMRNMVAELAQAEQVLSNEQQIQ 2
            FD + K  + +M Q+  +M N++ EL  AE  +++EQQ+Q
Sbjct: 64  KFDGYKKHQNQTMRQYFIIMSNLINELRGAEHEMTDEQQVQ 104


>ref|XP_002525486.1| conserved hypothetical protein [Ricinus communis]
           gi|223535223|gb|EEF36901.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 32/86 (37%), Positives = 50/86 (58%)
 Frame = -3

Query: 271 NVARIAILGTMRNDFMMRYDGLGSAKELWEAVKADLGGTTTAQLRRLQMSFDKFIKLPHT 92
           + AR  ++  M ND +  Y    ++  +W A++   GGTT ++L++L + FD F K+P+ 
Sbjct: 23  STARGILISFMNNDLVYEYQQYPTSHAMWVALREKFGGTTVSKLKQLTIKFDTFKKVPNK 82

Query: 91  SMTQHCTVMRNMVAELAQAEQVLSNE 14
           SM QH   M NM+ EL  A  VL +E
Sbjct: 83  SMKQHLRDMSNMIMELKSARHVLIDE 108


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