BLASTX nr result

ID: Coptis24_contig00017656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017656
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155079.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   111   7e-23
ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   111   7e-23
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric...   110   2e-22
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...   108   6e-22
emb|CBI15033.3| unnamed protein product [Vitis vinifera]              108   6e-22

>ref|XP_004155079.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Cucumis sativus]
          Length = 1304

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -1

Query: 246 MVTSDDVEPIVLKLSSNKAKLREEGANLLNTWLEGDKSNEFCQFISQRTSKLKPNDIPNS 67
           M+TS DV+ I+ KLSS+KAK REEG  LLNTWLEG+K+ +FC+FI Q T+KLKP +IP+ 
Sbjct: 1   MITSRDVQDIISKLSSDKAKTREEGIKLLNTWLEGEKAIDFCKFIGQNTAKLKPEEIPSP 60

Query: 66  KTWPFLIGLLTECVKSEISESK 1
           +TWPF+  LL +CV  EIS SK
Sbjct: 61  ETWPFITKLLIQCVSMEISSSK 82


>ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATM-like [Cucumis sativus]
          Length = 2985

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -1

Query: 246 MVTSDDVEPIVLKLSSNKAKLREEGANLLNTWLEGDKSNEFCQFISQRTSKLKPNDIPNS 67
           M+TS DV+ I+ KLSS+KAK REEG  LLNTWLEG+K+ +FC+FI Q T+KLKP +IP+ 
Sbjct: 1   MITSRDVQDIISKLSSDKAKTREEGIKLLNTWLEGEKAIDFCKFIGQNTAKLKPEEIPSP 60

Query: 66  KTWPFLIGLLTECVKSEISESK 1
           +TWPF+  LL +CV  EIS SK
Sbjct: 61  ETWPFITKLLIQCVSMEISSSK 82


>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
           gi|223550511|gb|EEF51998.1| ataxia telangiectasia
           mutated, putative [Ricinus communis]
          Length = 2954

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/82 (65%), Positives = 66/82 (80%)
 Frame = -1

Query: 246 MVTSDDVEPIVLKLSSNKAKLREEGANLLNTWLEGDKSNEFCQFISQRTSKLKPNDIPNS 67
           MVTS DV+ IV KLSS+KAK REEG  LLNTWLEG++S +FC +I Q+T+KLK N+IP+S
Sbjct: 1   MVTSRDVQEIVSKLSSDKAKAREEGIKLLNTWLEGERSIKFCNYIGQKTAKLKLNEIPHS 60

Query: 66  KTWPFLIGLLTECVKSEISESK 1
           +TWPFLI LL + V  EIS SK
Sbjct: 61  ETWPFLISLLIQSVSLEISTSK 82


>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/81 (62%), Positives = 61/81 (75%)
 Frame = -1

Query: 243 VTSDDVEPIVLKLSSNKAKLREEGANLLNTWLEGDKSNEFCQFISQRTSKLKPNDIPNSK 64
           +TS DVE IV KLSS+K K REEG  LLN WLEG+KS  FC+F+   T+ LKPN+IP+S+
Sbjct: 4   ITSRDVEEIVSKLSSDKTKAREEGIKLLNAWLEGEKSIRFCKFLGHNTAMLKPNEIPHSE 63

Query: 63  TWPFLIGLLTECVKSEISESK 1
           TWPFL+ LL  CV  EIS SK
Sbjct: 64  TWPFLVTLLIRCVSLEISSSK 84


>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/81 (62%), Positives = 61/81 (75%)
 Frame = -1

Query: 243 VTSDDVEPIVLKLSSNKAKLREEGANLLNTWLEGDKSNEFCQFISQRTSKLKPNDIPNSK 64
           +TS DVE IV KLSS+K K REEG  LLN WLEG+KS  FC+F+   T+ LKPN+IP+S+
Sbjct: 4   ITSRDVEEIVSKLSSDKTKAREEGIKLLNAWLEGEKSIRFCKFLGHNTAMLKPNEIPHSE 63

Query: 63  TWPFLIGLLTECVKSEISESK 1
           TWPFL+ LL  CV  EIS SK
Sbjct: 64  TWPFLVTLLIRCVSLEISSSK 84


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