BLASTX nr result

ID: Coptis24_contig00017655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017655
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62615.1| hypothetical protein VITISV_036164 [Vitis vinifera]    59   4e-07
ref|XP_002263618.2| PREDICTED: probable leucine-rich repeat rece...    58   7e-07
emb|CBI25541.3| unnamed protein product [Vitis vinifera]               58   7e-07

>emb|CAN62615.1| hypothetical protein VITISV_036164 [Vitis vinifera]
          Length = 546

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 43/76 (56%)
 Frame = +1

Query: 259 ILSKVCGTDVLTYSRSSEHKLFYINGGAVDKVSFCKSLKLSNAVRCFSPSNLKEWEILYT 438
           I SKVCGTD + Y  S  ++LFYING  VDK  FCK+LK+  A  C    +        +
Sbjct: 34  IQSKVCGTDHVAYLNSHGYELFYINGDVVDKDVFCKALKVYYANNCVFEGHPG------S 87

Query: 439 NDCSLGIYLVEKPRRA 486
           N C L + LVE P +A
Sbjct: 88  NYCGLNLPLVELPAKA 103


>ref|XP_002263618.2| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At4g00330-like [Vitis vinifera]
          Length = 502

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/76 (44%), Positives = 42/76 (55%)
 Frame = +1

Query: 259 ILSKVCGTDVLTYSRSSEHKLFYINGGAVDKVSFCKSLKLSNAVRCFSPSNLKEWEILYT 438
           I SKVCGTD + Y  S  ++LFYING  VDK  FCK+LK+  A  C    +        +
Sbjct: 34  IQSKVCGTDHVAYLNSHGYELFYINGDVVDKDVFCKALKVYYANNCVFEGHPG------S 87

Query: 439 NDCSLGIYLVEKPRRA 486
           N C L + LVE P  A
Sbjct: 88  NYCGLNLPLVELPANA 103


>emb|CBI25541.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/76 (44%), Positives = 42/76 (55%)
 Frame = +1

Query: 259 ILSKVCGTDVLTYSRSSEHKLFYINGGAVDKVSFCKSLKLSNAVRCFSPSNLKEWEILYT 438
           I SKVCGTD + Y  S  ++LFYING  VDK  FCK+LK+  A  C    +        +
Sbjct: 24  IQSKVCGTDHVAYLNSHGYELFYINGDVVDKDVFCKALKVYYANNCVFEGHPG------S 77

Query: 439 NDCSLGIYLVEKPRRA 486
           N C L + LVE P  A
Sbjct: 78  NYCGLNLPLVELPANA 93


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