BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017652
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331766.1| methyl binding domain protein [Populus trich...   202   1e-49
ref|XP_002320386.1| methyl binding domain protein [Populus trich...   199   8e-49
ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   193   3e-47
emb|CBI32313.3| unnamed protein product [Vitis vinifera]              190   4e-46
ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-contain...   190   4e-46

>ref|XP_002331766.1| methyl binding domain protein [Populus trichocarpa]
           gi|224117178|ref|XP_002331767.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
           gi|222874359|gb|EEF11490.1| methyl binding domain
           protein [Populus trichocarpa]
           gi|222874360|gb|EEF11491.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
          Length = 182

 Score =  202 bits (513), Expect = 1e-49
 Identities = 91/133 (68%), Positives = 111/133 (83%)
 Frame = -2

Query: 685 YAVQCGKCLKWRLIPTQEEYEEIRNNASEDPWVCDKKPNVSCEDPADIEYDNSRTWAIDK 506
           YA QC KCLKWR+IPT+EEYEEIR+   E+P+VCD+KP VSC+DPADIEY+ +RTW ID+
Sbjct: 28  YAAQCDKCLKWRVIPTEEEYEEIRSKMEENPYVCDRKPGVSCDDPADIEYNATRTWVIDR 87

Query: 505 PDIPKTPSGFKRTLVVRRDFSKCDAYYYLPTGKKVRGLSEIDQFLKANPKYRSTVKLSDF 326
           P +PKTP GFKR+LV+RRDFSK DAYY  PTGKK+R  +EI  F++ANPKY+  V LS F
Sbjct: 88  PGVPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFIEANPKYKD-VNLSAF 146

Query: 325 NFSVPKIMEDTIP 287
           NF+ PK+MEDTIP
Sbjct: 147 NFTSPKVMEDTIP 159


>ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
           gi|118485542|gb|ABK94623.1| unknown [Populus
           trichocarpa] gi|222861159|gb|EEE98701.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 182

 Score =  199 bits (505), Expect = 8e-49
 Identities = 91/133 (68%), Positives = 109/133 (81%)
 Frame = -2

Query: 685 YAVQCGKCLKWRLIPTQEEYEEIRNNASEDPWVCDKKPNVSCEDPADIEYDNSRTWAIDK 506
           YA QC KCLKWR+I T+EEYEEIR+   E P+VC++KP VSC+DPADIEY+ +RTW ID+
Sbjct: 28  YAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNRKPGVSCDDPADIEYNATRTWVIDR 87

Query: 505 PDIPKTPSGFKRTLVVRRDFSKCDAYYYLPTGKKVRGLSEIDQFLKANPKYRSTVKLSDF 326
           P IPKTP GFKR+LV+RRDFSK DAYY  PTGKK+R  +EI  F+ ANPKY+  V LSDF
Sbjct: 88  PGIPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFIDANPKYKD-VNLSDF 146

Query: 325 NFSVPKIMEDTIP 287
           NF+ PK+MEDTIP
Sbjct: 147 NFTSPKVMEDTIP 159


>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  193 bits (491), Expect = 3e-47
 Identities = 87/133 (65%), Positives = 108/133 (81%)
 Frame = -2

Query: 685 YAVQCGKCLKWRLIPTQEEYEEIRNNASEDPWVCDKKPNVSCEDPADIEYDNSRTWAIDK 506
           YA QC KC+KWR+I T+EEYEEIR+   E+P+ C++KP +SCEDPADIE D SRTW IDK
Sbjct: 7   YAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRTWVIDK 66

Query: 505 PDIPKTPSGFKRTLVVRRDFSKCDAYYYLPTGKKVRGLSEIDQFLKANPKYRSTVKLSDF 326
           P +PKTP GFKR+LV+RRDFSK DAYY  PTGKK+R  +EI  FL+ANPKY+  V + DF
Sbjct: 67  PGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKYKG-VSIEDF 125

Query: 325 NFSVPKIMEDTIP 287
           NF+ PK+ME+T+P
Sbjct: 126 NFTSPKVMEETVP 138


>emb|CBI32313.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  190 bits (482), Expect = 4e-46
 Identities = 90/133 (67%), Positives = 105/133 (78%)
 Frame = -2

Query: 685 YAVQCGKCLKWRLIPTQEEYEEIRNNASEDPWVCDKKPNVSCEDPADIEYDNSRTWAIDK 506
           YAVQC  CLKWRLI T+EEYEEIR+   E+P+VC KK +VSCEDP DIEYD +RTWA DK
Sbjct: 21  YAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSKKADVSCEDPTDIEYDATRTWAADK 80

Query: 505 PDIPKTPSGFKRTLVVRRDFSKCDAYYYLPTGKKVRGLSEIDQFLKANPKYRSTVKLSDF 326
           P++PKTP GF+R LV+R+DFSK DAYY  PTGKKVR LSEI  +L +NP  +  +  SDF
Sbjct: 81  PNVPKTPKGFQRDLVLRKDFSKMDAYYITPTGKKVRALSEIAAYLSSNPDCKD-LSPSDF 139

Query: 325 NFSVPKIMEDTIP 287
           NF VPKIM DTIP
Sbjct: 140 NFMVPKIMADTIP 152


>ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
           isoform 1 [Vitis vinifera]
          Length = 179

 Score =  190 bits (482), Expect = 4e-46
 Identities = 90/133 (67%), Positives = 105/133 (78%)
 Frame = -2

Query: 685 YAVQCGKCLKWRLIPTQEEYEEIRNNASEDPWVCDKKPNVSCEDPADIEYDNSRTWAIDK 506
           YAVQC  CLKWRLI T+EEYEEIR+   E+P+VC KK +VSCEDP DIEYD +RTWA DK
Sbjct: 24  YAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSKKADVSCEDPTDIEYDATRTWAADK 83

Query: 505 PDIPKTPSGFKRTLVVRRDFSKCDAYYYLPTGKKVRGLSEIDQFLKANPKYRSTVKLSDF 326
           P++PKTP GF+R LV+R+DFSK DAYY  PTGKKVR LSEI  +L +NP  +  +  SDF
Sbjct: 84  PNVPKTPKGFQRDLVLRKDFSKMDAYYITPTGKKVRALSEIAAYLSSNPDCKD-LSPSDF 142

Query: 325 NFSVPKIMEDTIP 287
           NF VPKIM DTIP
Sbjct: 143 NFMVPKIMADTIP 155