BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017651
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...   120   7e-25
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-24
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   119   2e-24
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...   115   3e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   112   2e-22

>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
            gi|223532164|gb|EEF33970.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 339

 Score =  120 bits (301), Expect = 7e-25
 Identities = 90/223 (40%), Positives = 118/223 (52%), Gaps = 27/223 (12%)
 Frame = +2

Query: 488  GALAFVKPGNKVWTCI-DISSDGQLIDDIIYYEDKFYVVDNDGRVFSCNLRHPSPSLSVV 664
            G LA  K G++ WT I D+ S     DD+I Y+  FY VDN GR     L   +  L ++
Sbjct: 121  GKLAMFKSGDRRWTIIQDMPSP---YDDVIVYKGNFYAVDNTGRTVIVRL---NTELGLI 174

Query: 665  APGPDLFG--KKYLVELCGDLLQIVR---------DLEFGDDFR---AGYV---TVGFTV 793
            A    +FG  KKYLVE  GDLL +            L FG++F    A Y+   TV F V
Sbjct: 175  AN--PVFGGDKKYLVESLGDLLLVDMYLSIDTAEGGLSFGEEFLEHLAQYMSERTVRFKV 232

Query: 794  FKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGCKPNGIYFTDDMHCGFYNDLYG 973
            FKLD+    WIEVKSLG R+LFLGD+S+ S SVSD+ GCK N I+F D+       +L  
Sbjct: 233  FKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDNFFYSRDENLRA 292

Query: 974  -------IHPYDMGVFSMEDRSIEL--HYPMESKVILPAPTWI 1075
                   +   D+GVF +E   I    +YP  +K+  P P W+
Sbjct: 293  NGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMFWPPPHWL 335


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  119 bits (299), Expect = 1e-24
 Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 6/205 (2%)
 Frame = +2

Query: 488  GALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKFYVVDNDGRVFSCNLRHPSPSLSVVA 667
            G LA+ K G++ W  ++ S      +D+IY+   FY V+  G++  C++   SP +S + 
Sbjct: 191  GDLAYCKNGDECWNIVENSRS--FSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIE 248

Query: 668  PGPDLFGK-KYLVELCGDLLQIVRDLEFGDDFRAG-YVTVGFTVFKLDRLGANWIEVKSL 841
                + G  +YLV     LL + R L+   +F    Y T  F VFKLD  G  W  V SL
Sbjct: 249  TPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSL 308

Query: 842  GGRILFLGDNSSMSLSVSDMLGCKPNGIYFTDDMHCGFYNDLYGIHPYDMGVFSMEDRSI 1021
            G  +LF+G+NSS++LS S + GC  + IY+TDD     Y+   G H  D+G+F + D SI
Sbjct: 309  GDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEH--DLGIFKLSDGSI 366

Query: 1022 E--LHYPME--SKVILPAPTWIEPS 1084
            E    YP    S++  P P WI P+
Sbjct: 367  EPLPCYPRNSYSRLQWPPPLWISPN 391


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  119 bits (297), Expect = 2e-24
 Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 12/236 (5%)
 Frame = +2

Query: 413  KQILTVDEPVLDTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKF 592
            ++++    P+ D N+VV+A   Q    LA+ + G+K W+ ++ +      +D+I+    F
Sbjct: 166  RKVVLSSSPLKDNNFVVIAILNQ-TDDLAYCRNGDKSWSLVENARS--FCEDVIFVNGMF 222

Query: 593  YVVDNDGRVFSCNLRHPSPSLSVVAPGPDLFGK-KYLVELCGDLLQIVR--DLEFGDDF- 760
            Y V+  G++  C++   SP +S +       G  +YLV    +LL + R  DLE+  D  
Sbjct: 223  YAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHP 282

Query: 761  ----RAGYVTVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGCKPNGIY 928
                   Y T+ F VF+LD  G  W+ + +LG + LF+G+NSS+SLS +D  GC  N IY
Sbjct: 283  DMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIY 342

Query: 929  FTDDMHCGFYNDLYGIHPYDMGVFSMEDRSIE--LHYP--MESKVILPAPTWIEPS 1084
            +TDD     Y+  +G H  D+G+F + D +IE    YP    S +    P W+ P+
Sbjct: 343  YTDDYLDANYDGHFGDH--DLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
            gi|222850098|gb|EEE87645.1| f-box family protein [Populus
            trichocarpa]
          Length = 410

 Score =  115 bits (287), Expect = 3e-23
 Identities = 89/232 (38%), Positives = 120/232 (51%), Gaps = 22/232 (9%)
 Frame = +2

Query: 446  DTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKFYVVDNDGRVFS 625
            +T +V++  +    G LA  K G+K WT I+        DD+I Y+ +FY VDN GR   
Sbjct: 171  ETEFVLLTIHVS--GKLAMFKSGDKRWTIINEMPSP--FDDVIVYKGRFYAVDNTGRTVV 226

Query: 626  CNLRHPSPSLSVVAPGPDLFG--KKYLVELCGDLLQIV--------RDLEFGDDFRAGYV 775
              L      L +V  G  +FG  KKYLVE  GDLL +           L  G+D     V
Sbjct: 227  VAL---DTDLGLV--GDPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGNDVVQDLV 281

Query: 776  ------TVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGCKPNGIYFTD 937
                  TV F VFKL+  G +WIEVK+L  R+LFLGD+S+ S S S++ GCK N I+F D
Sbjct: 282  QYMSERTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFED 341

Query: 938  DMHCGFYN----DLYGIHPYDMGVFSMEDRSIE--LHYPMESKVILPAPTWI 1075
            +    FY+    D   +   D+GVF +E   I    ++P  SK+  P P WI
Sbjct: 342  NF---FYSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWI 390


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  112 bits (280), Expect = 2e-22
 Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 7/238 (2%)
 Frame = +2

Query: 392  MHNTIAYKQILTVDEPVLDTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDI 571
            M ++   K IL+   P   ++++ +    Q  G LA  +  +  WT ++ +      +D+
Sbjct: 157  MRDSFIKKTILS-SSPANGSDFIAVVILNQ-TGDLALCRKSDDSWTFLEDAQS--YAEDV 212

Query: 572  IYYEDKFYVVDNDGRVFSCNLRHPSPSLSVVAPGPDLFGK--KYLVELCGDLLQIVRDLE 745
            I++   FY V+  G +  C++   SP +S++   P  FG   +YLVE   +LL + R L+
Sbjct: 213  IFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM-PQQFGGDLQYLVESGEELLLVTRYLD 271

Query: 746  FGDDFRAG-----YVTVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGC 910
               D         Y T  F V +LD     W  V SLG R LFLG+N S+SLS  D  GC
Sbjct: 272  LTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331

Query: 911  KPNGIYFTDDMHCGFYNDLYGIHPYDMGVFSMEDRSIELHYPMESKVILPAPTWIEPS 1084
            K N IY+TDD     Y+ + G    D+G+F++ED SIE       ++  P P W+ P+
Sbjct: 332  KGNCIYYTDDYSEDNYDGIGG--EQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPN 387