BLASTX nr result
ID: Coptis24_contig00017651
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017651 (1226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm... 120 7e-25 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 119 1e-24 ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 119 2e-24 ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g... 115 3e-23 ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 112 2e-22 >ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis] gi|223532164|gb|EEF33970.1| conserved hypothetical protein [Ricinus communis] Length = 339 Score = 120 bits (301), Expect = 7e-25 Identities = 90/223 (40%), Positives = 118/223 (52%), Gaps = 27/223 (12%) Frame = +2 Query: 488 GALAFVKPGNKVWTCI-DISSDGQLIDDIIYYEDKFYVVDNDGRVFSCNLRHPSPSLSVV 664 G LA K G++ WT I D+ S DD+I Y+ FY VDN GR L + L ++ Sbjct: 121 GKLAMFKSGDRRWTIIQDMPSP---YDDVIVYKGNFYAVDNTGRTVIVRL---NTELGLI 174 Query: 665 APGPDLFG--KKYLVELCGDLLQIVR---------DLEFGDDFR---AGYV---TVGFTV 793 A +FG KKYLVE GDLL + L FG++F A Y+ TV F V Sbjct: 175 AN--PVFGGDKKYLVESLGDLLLVDMYLSIDTAEGGLSFGEEFLEHLAQYMSERTVRFKV 232 Query: 794 FKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGCKPNGIYFTDDMHCGFYNDLYG 973 FKLD+ WIEVKSLG R+LFLGD+S+ S SVSD+ GCK N I+F D+ +L Sbjct: 233 FKLDKEAQTWIEVKSLGDRVLFLGDDSTFSASVSDLSGCKGNCIFFVDNFFYSRDENLRA 292 Query: 974 -------IHPYDMGVFSMEDRSIEL--HYPMESKVILPAPTWI 1075 + D+GVF +E I +YP +K+ P P W+ Sbjct: 293 NGGDDGVLAGRDIGVFDLETGCIGPLGNYPEYAKMFWPPPHWL 335 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 119 bits (299), Expect = 1e-24 Identities = 75/205 (36%), Positives = 110/205 (53%), Gaps = 6/205 (2%) Frame = +2 Query: 488 GALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKFYVVDNDGRVFSCNLRHPSPSLSVVA 667 G LA+ K G++ W ++ S +D+IY+ FY V+ G++ C++ SP +S + Sbjct: 191 GDLAYCKNGDECWNIVENSRS--FSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIE 248 Query: 668 PGPDLFGK-KYLVELCGDLLQIVRDLEFGDDFRAG-YVTVGFTVFKLDRLGANWIEVKSL 841 + G +YLV LL + R L+ +F Y T F VFKLD G W V SL Sbjct: 249 TPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSL 308 Query: 842 GGRILFLGDNSSMSLSVSDMLGCKPNGIYFTDDMHCGFYNDLYGIHPYDMGVFSMEDRSI 1021 G +LF+G+NSS++LS S + GC + IY+TDD Y+ G H D+G+F + D SI Sbjct: 309 GDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEH--DLGIFKLSDGSI 366 Query: 1022 E--LHYPME--SKVILPAPTWIEPS 1084 E YP S++ P P WI P+ Sbjct: 367 EPLPCYPRNSYSRLQWPPPLWISPN 391 >ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 398 Score = 119 bits (297), Expect = 2e-24 Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 12/236 (5%) Frame = +2 Query: 413 KQILTVDEPVLDTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKF 592 ++++ P+ D N+VV+A Q LA+ + G+K W+ ++ + +D+I+ F Sbjct: 166 RKVVLSSSPLKDNNFVVIAILNQ-TDDLAYCRNGDKSWSLVENARS--FCEDVIFVNGMF 222 Query: 593 YVVDNDGRVFSCNLRHPSPSLSVVAPGPDLFGK-KYLVELCGDLLQIVR--DLEFGDDF- 760 Y V+ G++ C++ SP +S + G +YLV +LL + R DLE+ D Sbjct: 223 YAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHP 282 Query: 761 ----RAGYVTVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGCKPNGIY 928 Y T+ F VF+LD G W+ + +LG + LF+G+NSS+SLS +D GC N IY Sbjct: 283 DMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIY 342 Query: 929 FTDDMHCGFYNDLYGIHPYDMGVFSMEDRSIE--LHYP--MESKVILPAPTWIEPS 1084 +TDD Y+ +G H D+G+F + D +IE YP S + P W+ P+ Sbjct: 343 YTDDYLDANYDGHFGDH--DLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396 >ref|XP_002313690.1| f-box family protein [Populus trichocarpa] gi|222850098|gb|EEE87645.1| f-box family protein [Populus trichocarpa] Length = 410 Score = 115 bits (287), Expect = 3e-23 Identities = 89/232 (38%), Positives = 120/232 (51%), Gaps = 22/232 (9%) Frame = +2 Query: 446 DTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDIIYYEDKFYVVDNDGRVFS 625 +T +V++ + G LA K G+K WT I+ DD+I Y+ +FY VDN GR Sbjct: 171 ETEFVLLTIHVS--GKLAMFKSGDKRWTIINEMPSP--FDDVIVYKGRFYAVDNTGRTVV 226 Query: 626 CNLRHPSPSLSVVAPGPDLFG--KKYLVELCGDLLQIV--------RDLEFGDDFRAGYV 775 L L +V G +FG KKYLVE GDLL + L G+D V Sbjct: 227 VAL---DTDLGLV--GDPVFGGDKKYLVESKGDLLLVDMYLSIDTDEGLSIGNDVVQDLV 281 Query: 776 ------TVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGCKPNGIYFTD 937 TV F VFKL+ G +WIEVK+L R+LFLGD+S+ S S S++ GCK N I+F D Sbjct: 282 QYMSERTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSASASELSGCKGNCIFFED 341 Query: 938 DMHCGFYN----DLYGIHPYDMGVFSMEDRSIE--LHYPMESKVILPAPTWI 1075 + FY+ D + D+GVF +E I ++P SK+ P P WI Sbjct: 342 NF---FYSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWPPPDWI 390 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 112 bits (280), Expect = 2e-22 Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 7/238 (2%) Frame = +2 Query: 392 MHNTIAYKQILTVDEPVLDTNYVVMASYGQFVGALAFVKPGNKVWTCIDISSDGQLIDDI 571 M ++ K IL+ P ++++ + Q G LA + + WT ++ + +D+ Sbjct: 157 MRDSFIKKTILS-SSPANGSDFIAVVILNQ-TGDLALCRKSDDSWTFLEDAQS--YAEDV 212 Query: 572 IYYEDKFYVVDNDGRVFSCNLRHPSPSLSVVAPGPDLFGK--KYLVELCGDLLQIVRDLE 745 I++ FY V+ G + C++ SP +S++ P FG +YLVE +LL + R L+ Sbjct: 213 IFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEM-PQQFGGDLQYLVESGEELLLVTRYLD 271 Query: 746 FGDDFRAG-----YVTVGFTVFKLDRLGANWIEVKSLGGRILFLGDNSSMSLSVSDMLGC 910 D Y T F V +LD W V SLG R LFLG+N S+SLS D GC Sbjct: 272 LTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGC 331 Query: 911 KPNGIYFTDDMHCGFYNDLYGIHPYDMGVFSMEDRSIELHYPMESKVILPAPTWIEPS 1084 K N IY+TDD Y+ + G D+G+F++ED SIE ++ P P W+ P+ Sbjct: 332 KGNCIYYTDDYSEDNYDGIGG--EQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPN 387