BLASTX nr result

ID: Coptis24_contig00017638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017638
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 ...   185   4e-45
emb|CAN67631.1| hypothetical protein VITISV_035299 [Vitis vinifera]   185   4e-45
ref|XP_002297977.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-44
gb|ABK96686.1| unknown [Populus trichocarpa x Populus deltoides]      181   5e-44
gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis]    180   1e-43

>ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 [Vitis vinifera]
           gi|297742330|emb|CBI34479.3| unnamed protein product
           [Vitis vinifera]
          Length = 662

 Score =  185 bits (469), Expect = 4e-45
 Identities = 85/93 (91%), Positives = 90/93 (96%)
 Frame = -1

Query: 280 ALSSTPRGEVLVRGNTLFSGYYKREDLTKEVLIDGWFHTGDVGEWQPDGSMKLIDRKKNI 101
           ALSSTPRGE+ +RG TLFSGYYKREDLTKEVL+DGWFHTGDVGEWQPDGSMK+IDRKKNI
Sbjct: 461 ALSSTPRGEICIRGKTLFSGYYKREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNI 520

Query: 100 FKLSQGEYVAVENLENIYGVASDIDSIWIYGNS 2
           FKLSQGEYVAVENLENIYG+ SDIDSIWIYGNS
Sbjct: 521 FKLSQGEYVAVENLENIYGLVSDIDSIWIYGNS 553


>emb|CAN67631.1| hypothetical protein VITISV_035299 [Vitis vinifera]
          Length = 654

 Score =  185 bits (469), Expect = 4e-45
 Identities = 85/93 (91%), Positives = 90/93 (96%)
 Frame = -1

Query: 280 ALSSTPRGEVLVRGNTLFSGYYKREDLTKEVLIDGWFHTGDVGEWQPDGSMKLIDRKKNI 101
           ALSSTPRGE+ +RG TLFSGYYKREDLTKEVL+DGWFHTGDVGEWQPDGSMK+IDRKKNI
Sbjct: 452 ALSSTPRGEICIRGKTLFSGYYKREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNI 511

Query: 100 FKLSQGEYVAVENLENIYGVASDIDSIWIYGNS 2
           FKLSQGEYVAVENLENIYG+ SDIDSIWIYGNS
Sbjct: 512 FKLSQGEYVAVENLENIYGLVSDIDSIWIYGNS 544


>ref|XP_002297977.1| predicted protein [Populus trichocarpa] gi|222845235|gb|EEE82782.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  181 bits (459), Expect = 5e-44
 Identities = 82/93 (88%), Positives = 89/93 (95%)
 Frame = -1

Query: 280 ALSSTPRGEVLVRGNTLFSGYYKREDLTKEVLIDGWFHTGDVGEWQPDGSMKLIDRKKNI 101
           ALSSTPRGE+ +RG TLF+GYYKREDLTKEVLIDGWFHTGD+GEWQPDGSMK+IDRKKNI
Sbjct: 461 ALSSTPRGEICIRGKTLFAGYYKREDLTKEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNI 520

Query: 100 FKLSQGEYVAVENLENIYGVASDIDSIWIYGNS 2
           FKLSQGEYVAVENLENIY + SDIDSIW+YGNS
Sbjct: 521 FKLSQGEYVAVENLENIYSLVSDIDSIWVYGNS 553


>gb|ABK96686.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 662

 Score =  181 bits (459), Expect = 5e-44
 Identities = 82/93 (88%), Positives = 89/93 (95%)
 Frame = -1

Query: 280 ALSSTPRGEVLVRGNTLFSGYYKREDLTKEVLIDGWFHTGDVGEWQPDGSMKLIDRKKNI 101
           ALSSTPRGE+ +RG TLF+GYYKREDLTKEVLIDGWFHTGD+GEWQPDGSMK+IDRKKNI
Sbjct: 461 ALSSTPRGEICIRGKTLFAGYYKREDLTKEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNI 520

Query: 100 FKLSQGEYVAVENLENIYGVASDIDSIWIYGNS 2
           FKLSQGEYVAVENLENIY + SDIDSIW+YGNS
Sbjct: 521 FKLSQGEYVAVENLENIYSLVSDIDSIWVYGNS 553


>gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis]
          Length = 665

 Score =  180 bits (456), Expect = 1e-43
 Identities = 81/93 (87%), Positives = 91/93 (97%)
 Frame = -1

Query: 280 ALSSTPRGEVLVRGNTLFSGYYKREDLTKEVLIDGWFHTGDVGEWQPDGSMKLIDRKKNI 101
           ALSSTPRGE+ VRG+T+F+GYYKREDLTKEVLIDGWFHTGD+GEWQ DGS+K+IDRKKNI
Sbjct: 464 ALSSTPRGEICVRGSTVFAGYYKREDLTKEVLIDGWFHTGDIGEWQADGSLKIIDRKKNI 523

Query: 100 FKLSQGEYVAVENLENIYGVASDIDSIWIYGNS 2
           FKLSQGEYVAVENLENIYG+ASD+DSIW+YGNS
Sbjct: 524 FKLSQGEYVAVENLENIYGLASDVDSIWVYGNS 556


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