BLASTX nr result

ID: Coptis24_contig00017630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017630
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19892.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002279681.1| PREDICTED: uncharacterized protein LOC100252...   172   3e-41
ref|XP_002319205.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_004152755.1| PREDICTED: uncharacterized protein LOC101210...   165   3e-39
ref|XP_002510556.1| protein with unknown function [Ricinus commu...   162   3e-38

>emb|CBI19892.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  172 bits (436), Expect = 3e-41
 Identities = 87/141 (61%), Positives = 109/141 (77%), Gaps = 7/141 (4%)
 Frame = +1

Query: 4   KRLKSEVYDGFTHVFDCGSSQNEVYEKIMEPLVSDFLRGKSGMLATMGPTGSGKTHTIFG 183
           KR+KSEVY+GF+HVF   SSQ EVYE++++PLV DF+ GKSGMLA +GP+GSGKTHT+FG
Sbjct: 119 KRIKSEVYEGFSHVFSADSSQEEVYERMVKPLVEDFINGKSGMLAALGPSGSGKTHTVFG 178

Query: 184 SPRHPGMLSLALANIFHCT-------PCSYYISMFEIYSEGGKGEKILDLSSSDGQDLVL 342
            PR PGM+ LAL  IF  T         S+YIS+FEIYSE GKGE++LDLS   G DL +
Sbjct: 179 CPREPGMVPLALQQIFKRTEGSGSEATRSFYISIFEIYSERGKGERMLDLSPG-GADLFM 237

Query: 343 QQSNVKGLQEVMVSSVTAAEA 405
           QQS++KGLQEV++S V  AE+
Sbjct: 238 QQSSIKGLQEVVISDVAQAES 258


>ref|XP_002279681.1| PREDICTED: uncharacterized protein LOC100252261 [Vitis vinifera]
          Length = 1273

 Score =  172 bits (436), Expect = 3e-41
 Identities = 87/141 (61%), Positives = 109/141 (77%), Gaps = 7/141 (4%)
 Frame = +1

Query: 4   KRLKSEVYDGFTHVFDCGSSQNEVYEKIMEPLVSDFLRGKSGMLATMGPTGSGKTHTIFG 183
           KR+KSEVY+GF+HVF   SSQ EVYE++++PLV DF+ GKSGMLA +GP+GSGKTHT+FG
Sbjct: 144 KRIKSEVYEGFSHVFSADSSQEEVYERMVKPLVEDFINGKSGMLAALGPSGSGKTHTVFG 203

Query: 184 SPRHPGMLSLALANIFHCT-------PCSYYISMFEIYSEGGKGEKILDLSSSDGQDLVL 342
            PR PGM+ LAL  IF  T         S+YIS+FEIYSE GKGE++LDLS   G DL +
Sbjct: 204 CPREPGMVPLALQQIFKRTEGSGSEATRSFYISIFEIYSERGKGERMLDLSPG-GADLFM 262

Query: 343 QQSNVKGLQEVMVSSVTAAEA 405
           QQS++KGLQEV++S V  AE+
Sbjct: 263 QQSSIKGLQEVVISDVAQAES 283


>ref|XP_002319205.1| predicted protein [Populus trichocarpa] gi|222857581|gb|EEE95128.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  166 bits (420), Expect = 2e-39
 Identities = 85/142 (59%), Positives = 108/142 (76%), Gaps = 7/142 (4%)
 Frame = +1

Query: 1   SKRLKSEVYDGFTHVFDCGSSQNEVYEKIMEPLVSDFLRGKSGMLATMGPTGSGKTHTIF 180
           SKR+KSEVY+GF+HVF   S+QNEV+EK+++PLV DFL GKSG+LA +GP+GSGKTHT+F
Sbjct: 155 SKRIKSEVYEGFSHVFASDSTQNEVFEKMVKPLVDDFLNGKSGLLAALGPSGSGKTHTVF 214

Query: 181 GSPRHPGMLSLALANIF-HCTPC------SYYISMFEIYSEGGKGEKILDLSSSDGQDLV 339
           G+PR PGM+ LAL  IF     C       + +S+FEIYS+ GKGEKI DL S DG DL 
Sbjct: 215 GTPREPGMVHLALKQIFKEAQQCGSKLTREFKVSVFEIYSDRGKGEKISDL-SPDGGDLS 273

Query: 340 LQQSNVKGLQEVMVSSVTAAEA 405
           +QQ+ +KGLQEV +SS   AE+
Sbjct: 274 MQQATIKGLQEVAISSAAQAES 295


>ref|XP_004152755.1| PREDICTED: uncharacterized protein LOC101210482 [Cucumis sativus]
          Length = 894

 Score =  165 bits (418), Expect = 3e-39
 Identities = 84/141 (59%), Positives = 109/141 (77%), Gaps = 6/141 (4%)
 Frame = +1

Query: 1   SKRLKSEVYDGFTHVFDCGSSQNEVYEKIMEPLVSDFLRGKSGMLATMGPTGSGKTHTIF 180
           ++R KSEVY+GF+HVF   SSQ+EVYE+++ PLV +FL+GKSGML  +GP+GSGKTHTIF
Sbjct: 150 TRRSKSEVYEGFSHVFSMESSQDEVYERMVSPLVEEFLKGKSGMLTALGPSGSGKTHTIF 209

Query: 181 GSPRHPGMLSLALANIFHC------TPCSYYISMFEIYSEGGKGEKILDLSSSDGQDLVL 342
           GSPR PGM+ LAL +IF        T  SYY+S+FEIYSE GKGEK+ DL S+DG +L +
Sbjct: 210 GSPRVPGMVPLALQHIFRTESSDSKTSRSYYLSIFEIYSEKGKGEKMNDL-SADGGELTM 268

Query: 343 QQSNVKGLQEVMVSSVTAAEA 405
           QQ  +KGL+EV++S    AE+
Sbjct: 269 QQFTIKGLKEVLISKAGEAES 289


>ref|XP_002510556.1| protein with unknown function [Ricinus communis]
           gi|223551257|gb|EEF52743.1| protein with unknown
           function [Ricinus communis]
          Length = 944

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/142 (57%), Positives = 107/142 (75%), Gaps = 7/142 (4%)
 Frame = +1

Query: 1   SKRLKSEVYDGFTHVFDCGSSQNEVYEKIMEPLVSDFLRGKSGMLATMGPTGSGKTHTIF 180
           SKR+KS VY+GF+HVF   SSQN VY+K+++PLV DFL+GKSGMLA +GP+GSGKTHT+F
Sbjct: 149 SKRIKSVVYEGFSHVFASDSSQNAVYDKMVKPLVDDFLKGKSGMLAALGPSGSGKTHTVF 208

Query: 181 GSPRHPGMLSLALANIFHCTPC-------SYYISMFEIYSEGGKGEKILDLSSSDGQDLV 339
           G+ + PGM+ LAL +IF            S+YIS+FEIYSEGGK E++ DL S DG DL 
Sbjct: 209 GTVKQPGMVPLALQHIFKQNQASGSALSRSFYISIFEIYSEGGKVERMFDL-SPDGVDLS 267

Query: 340 LQQSNVKGLQEVMVSSVTAAEA 405
           +QQS +KGLQE+ ++    AE+
Sbjct: 268 MQQSTIKGLQEIPITDAAQAES 289


Top