BLASTX nr result

ID: Coptis24_contig00017628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017628
         (1731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20378.3| unnamed protein product [Vitis vinifera]               85   5e-14
ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247...    77   2e-11
ref|XP_002521829.1| conserved hypothetical protein [Ricinus comm...    59   3e-06

>emb|CBI20378.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 99/396 (25%), Positives = 145/396 (36%), Gaps = 39/396 (9%)
 Frame = -1

Query: 1596 DDHWAFLEEIDAPMWVDLNLLESTSGEQDINAGWFEQVHSFHLME-------FSTLSQGK 1438
            DDHWAFLEE +APMW DL  LE+ +  QD++  WF   H FH          FS  S+G 
Sbjct: 7    DDHWAFLEEFEAPMWADLT-LEAKTNNQDVDDKWFHISHPFHQFSSHQLKSAFSGSSEGS 65

Query: 1437 VNLETDLLGP-------------XXXXXXXXXXXXXXKWEGNNNHAIRSVSGKTS----- 1312
             NL+ DL GP                            +  N  H ++S+SGKTS     
Sbjct: 66   ENLDFDLHGPSSPKLPSSVSRSRGKHYRSRNWGKENGGFSLNKQHPVKSLSGKTSWVDSG 125

Query: 1311 SGQEVKPRIKIKHSSSFRGKVVGKGSSMDASRPVLLQRIPNLQVTPSLKVRLKSENTSNR 1132
            S QE+KP+                                NL+ T S K  L  +++S R
Sbjct: 126  SSQEIKPK----------------------------PSCGNLKGTCSSKTSLGCDSSSTR 157

Query: 1131 DGVK----PCS--GGSANTLSIPAXXXXXXXXXXXXGLDSHKCQSSIVDSRVSCTTTSNG 970
              +     P S  G S   LS  A                   +S+   S V+   T   
Sbjct: 158  TSIPNYTIPISSFGDSKGRLSSVAI---------------KASESNSTTSTVTFEGTHQQ 202

Query: 969  PESISNFGDSQKSSGSRASNGS----ERISLRRSYVMRQPARVEV----XXXXXXXXXXX 814
            P+        + SSG            RI+LR+S   RQ +RVE+               
Sbjct: 203  PQK-----SLEVSSGPFGHTSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSAGK 257

Query: 813  XXXXXXXXXXXSFYDTMLTAKAKKSRTPESKQATKVEQPTDNNKAIVKNLTNRSEAQLLV 634
                          D   T    + RTP+S+   +  Q T  N+      +  S   +  
Sbjct: 258  SSVGSSSNPGYDVKDRTATEIRNRDRTPDSRNVMRTSQ-TAVNRGRASTTSKASNILVDY 316

Query: 633  QSSNPISDGKALIGRFGCQERSKLKISCQSECRRSL 526
            +++N   +GK ++ +   ++  K K+ CQ+  R+ L
Sbjct: 317  RTNNSRKEGKRIVAKSTTKDAVKSKVVCQTINRKGL 352


>ref|XP_002281734.1| PREDICTED: uncharacterized protein LOC100247040 [Vitis vinifera]
          Length = 445

 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 98/390 (25%), Positives = 143/390 (36%), Gaps = 33/390 (8%)
 Frame = -1

Query: 1596 DDHWAFLEEIDAPMWVDLNLLESTSGEQDINAGWFEQVHSFHLME-FSTLSQGKVNLETD 1420
            DDHWAFLEE +APMW DL  LE+ +  QD+    F Q  S  L   FS  S+G  NL+ D
Sbjct: 7    DDHWAFLEEFEAPMWADLT-LEAKTNNQDV----FHQFSSHQLKSAFSGSSEGSENLDFD 61

Query: 1419 LLGP-------------XXXXXXXXXXXXXXKWEGNNNHAIRSVSGKTS-----SGQEVK 1294
            L GP                            +  N  H ++S+SGKTS     S QE+K
Sbjct: 62   LHGPSSPKLPSSVSRSRGKHYRSRNWGKENGGFSLNKQHPVKSLSGKTSWVDSGSSQEIK 121

Query: 1293 PRIKIKHSSSFRGKVVGKGSSMDASRPVLLQRIPNLQVTPSLKVRLKSENTSNRDGVK-- 1120
            P+                                NL+ T S K  L  +++S R  +   
Sbjct: 122  PK----------------------------PSCGNLKGTCSSKTSLGCDSSSTRTSIPNY 153

Query: 1119 --PCS--GGSANTLSIPAXXXXXXXXXXXXGLDSHKCQSSIVDSRVSCTTTSNGPESISN 952
              P S  G S   LS  A                   +S+   S V+   T   P+    
Sbjct: 154  TIPISSFGDSKGRLSSVAI---------------KASESNSTTSTVTFEGTHQQPQK--- 195

Query: 951  FGDSQKSSGSRASNGS----ERISLRRSYVMRQPARVEV----XXXXXXXXXXXXXXXXX 796
                + SSG            RI+LR+S   RQ +RVE+                     
Sbjct: 196  --SLEVSSGPFGHTSGLLSVMRITLRKSCATRQASRVEINKCQQSEGCKSSAGKSSVGSS 253

Query: 795  XXXXXSFYDTMLTAKAKKSRTPESKQATKVEQPTDNNKAIVKNLTNRSEAQLLVQSSNPI 616
                    D   T    + RTP+S+   +  Q T  N+      +  S   +  +++N  
Sbjct: 254  SNPGYDVKDRTATEIRNRDRTPDSRNVMRTSQ-TAVNRGRASTTSKASNILVDYRTNNSR 312

Query: 615  SDGKALIGRFGCQERSKLKISCQSECRRSL 526
             +GK ++ +   ++  K K+ CQ+  R+ L
Sbjct: 313  KEGKRIVAKSTTKDAVKSKVVCQTINRKGL 342


>ref|XP_002521829.1| conserved hypothetical protein [Ricinus communis]
            gi|223539042|gb|EEF40639.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 373

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 21/119 (17%)
 Frame = -1

Query: 1602 IHDDHWAFLEEIDAPMWVDLNLLESTSGEQDINAGWFEQVHSFHLMEFSTLS-----QGK 1438
            I  DHWAFL+EI+APMWVDL  LE+ S   D++ GWF   H FH      L       G+
Sbjct: 10   ISRDHWAFLDEIEAPMWVDLT-LEANSNYTDVDDGWFHTSHLFHQCSSLQLKAAFAYSGE 68

Query: 1437 VNLETDLLG---------PXXXXXXXXXXXXXXKWEG-------NNNHAIRSVSGKTSS 1309
             +  +D++          P              KW G       N  H ++++SGK+++
Sbjct: 69   GSASSDIIDLKRTSSPELPSSVSRSRGKHYASKKWGGKCPDFSLNKKHPVKALSGKSTT 127


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