BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017625
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]    186   6e-45
ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|...   185   8e-45
gb|AFK48969.1| unknown [Lotus japonicus]                              185   8e-45
gb|AFK36120.1| unknown [Lotus japonicus]                              185   8e-45
emb|CBI22267.3| unnamed protein product [Vitis vinifera]              182   7e-44

>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score =  186 bits (471), Expect = 6e-45
 Identities = 82/119 (68%), Positives = 100/119 (84%)
 Frame = +2

Query: 77  LFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDWAKEHKFYLDDWLFFVYDRNQ 256
           L ++L C +VL++P+VSATR+ VGG+ GW++N  VNYT WAK+  FY  DWLFFVYDRNQ
Sbjct: 8   LAVVLMCAVVLMLPDVSATRWTVGGNQGWSTN--VNYTVWAKDKHFYNGDWLFFVYDRNQ 65

Query: 257 NNVLEVNKTNYDLCNADHPVHNWTTGAGRDVVPLNVTRPYYFISGNGFCYGGMKLTVFV 433
            NVLEVN+TNY+ CN+DHP+HNWTTGAGRDVVPLNVTR YYF+SG GFCY GMK+ + V
Sbjct: 66  MNVLEVNETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINV 124


>ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|87240662|gb|ABD32520.1|
           Blue (type 1) copper domain [Medicago truncatula]
           gi|355493609|gb|AES74812.1| Lamin-like protein [Medicago
           truncatula] gi|388499076|gb|AFK37604.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  185 bits (470), Expect = 8e-45
 Identities = 88/139 (63%), Positives = 108/139 (77%)
 Frame = +2

Query: 17  GEKKKIMVNLRITSMPTLTLLFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDW 196
           G KK++  +   T  PT+  +F++L   +++++P VSATR++VGG  GWN+N   NYT W
Sbjct: 3   GRKKRVFAS---TISPTM--VFLLLGFAVLVMLPMVSATRFMVGGRMGWNTN--FNYTTW 55

Query: 197 AKEHKFYLDDWLFFVYDRNQNNVLEVNKTNYDLCNADHPVHNWTTGAGRDVVPLNVTRPY 376
           AK   FY  DWLFFVYDRNQ NVLEVNKT+Y+ CN+DHP+HNWTTGAGRDVVPLNVTR Y
Sbjct: 56  AKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHY 115

Query: 377 YFISGNGFCYGGMKLTVFV 433
           YFISG GFC+GGMKL V V
Sbjct: 116 YFISGKGFCFGGMKLAVHV 134


>gb|AFK48969.1| unknown [Lotus japonicus]
          Length = 176

 Score =  185 bits (470), Expect = 8e-45
 Identities = 88/132 (66%), Positives = 103/132 (78%)
 Frame = +2

Query: 38  VNLRITSMPTLTLLFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDWAKEHKFY 217
           V  ++   P + LLF  L   ++L++PEVSA R++VG    WN N  VNYT WA++  FY
Sbjct: 4   VKKKMLGSPAMVLLF--LGFAVLLMVPEVSAKRWLVGDGKFWNPN--VNYTVWARDKHFY 59

Query: 218 LDDWLFFVYDRNQNNVLEVNKTNYDLCNADHPVHNWTTGAGRDVVPLNVTRPYYFISGNG 397
           +DDWLFFVYDRNQ NVLEVNKTNY+ C A+HP+HNWTTGAGRDVVPLNVTR YYFISGNG
Sbjct: 60  IDDWLFFVYDRNQMNVLEVNKTNYENCIAEHPIHNWTTGAGRDVVPLNVTRHYYFISGNG 119

Query: 398 FCYGGMKLTVFV 433
           FCYGGMKL V V
Sbjct: 120 FCYGGMKLAVRV 131


>gb|AFK36120.1| unknown [Lotus japonicus]
          Length = 176

 Score =  185 bits (470), Expect = 8e-45
 Identities = 88/132 (66%), Positives = 103/132 (78%)
 Frame = +2

Query: 38  VNLRITSMPTLTLLFMILTCTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDWAKEHKFY 217
           V  ++   P + LLF  L   ++L++PEVSA R++VG    WN N  VNYT WA++  FY
Sbjct: 4   VKKKMLGSPAMVLLF--LGFAVLLMVPEVSAKRWLVGDGKFWNPN--VNYTVWARDKHFY 59

Query: 218 LDDWLFFVYDRNQNNVLEVNKTNYDLCNADHPVHNWTTGAGRDVVPLNVTRPYYFISGNG 397
           +DDWLFFVYDRNQ NVLEVNKTNY+ C A+HP+HNWTTGAGRDVVPLNVTR YYFISGNG
Sbjct: 60  IDDWLFFVYDRNQMNVLEVNKTNYENCIAEHPIHNWTTGAGRDVVPLNVTRHYYFISGNG 119

Query: 398 FCYGGMKLTVFV 433
           FCYGGMKL V V
Sbjct: 120 FCYGGMKLAVRV 131


>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  182 bits (462), Expect = 7e-44
 Identities = 80/113 (70%), Positives = 96/113 (84%)
 Frame = +2

Query: 95  CTLVLIIPEVSATRYIVGGSNGWNSNGKVNYTDWAKEHKFYLDDWLFFVYDRNQNNVLEV 274
           C +VL++P+VSATR+ VGG+ GW++N  VNYT WAK+  FY  DWLFFVYDRNQ NVLEV
Sbjct: 2   CAVVLMLPDVSATRWTVGGNQGWSTN--VNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEV 59

Query: 275 NKTNYDLCNADHPVHNWTTGAGRDVVPLNVTRPYYFISGNGFCYGGMKLTVFV 433
           N+TNY+ CN+DHP+HNWTTGAGRDVVPLNVTR YYF+SG GFCY GMK+ + V
Sbjct: 60  NETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINV 112