BLASTX nr result

ID: Coptis24_contig00017620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017620
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283543.1| PREDICTED: uncharacterized protein sll0410 [...   152   9e-63
emb|CBI27005.3| unnamed protein product [Vitis vinifera]              143   4e-60
ref|XP_002526988.1| acyl-CoA thioesterase, putative [Ricinus com...   140   3e-58
ref|XP_002283545.2| PREDICTED: uncharacterized protein LOC100250...   136   2e-56
ref|XP_003516823.1| PREDICTED: uncharacterized protein LOC100806...   134   2e-54

>ref|XP_002283543.1| PREDICTED: uncharacterized protein sll0410 [Vitis vinifera]
          Length = 208

 Score =  152 bits (383), Expect(2) = 9e-63
 Identities = 83/144 (57%), Positives = 102/144 (70%), Gaps = 1/144 (0%)
 Frame = -2

Query: 897 MVQSLISRLHVSLPPSRAMSSYNVTY-PTKLLHVSWPSDYSHGKFFLSTRGVQFLPPVRN 721
           M+Q+L+S  H+++P SRA +     Y P  LL    P          S      +P VR+
Sbjct: 1   MLQALLSPTHMAVPASRAHTRGLRLYRPPLLLPAPQPPSNCRSPRLRS------VPAVRS 54

Query: 720 VNVKAFDVQGGKGMIGFFEVELKVRDYELDQYGVVNNAVYASYCQHGRHELFERMGVSAD 541
            +  AFD +GGKGM GF +VELKVRDYELDQYGVVNNAVYASYCQHGRHEL E++GV+AD
Sbjct: 55  ASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLEKIGVNAD 114

Query: 540 AVARNGEALALSEMSLKFLGPLRT 469
           AVAR G+ALALSE++LKFL PLR+
Sbjct: 115 AVARTGDALALSELTLKFLAPLRS 138



 Score =  115 bits (289), Expect(2) = 9e-63
 Identities = 53/69 (76%), Positives = 65/69 (94%)
 Frame = -3

Query: 452 QSGDRFVVKVRISGSSAARIFFEHAVCKLPNQEPILEAKATAICLDKNYRPVRIPPELRS 273
           +SGDRFVVKVR+S SSAAR++FEH + KLPN+EPILEA+ATA+CLDKNYRPVRIP E+RS
Sbjct: 137 RSGDRFVVKVRVSDSSAARLYFEHFIFKLPNEEPILEARATAVCLDKNYRPVRIPTEIRS 196

Query: 272 KIVQYLRNE 246
           K+VQ+LR+E
Sbjct: 197 KLVQFLRHE 205


>emb|CBI27005.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  143 bits (360), Expect(2) = 4e-60
 Identities = 68/90 (75%), Positives = 80/90 (88%)
 Frame = -2

Query: 738 LPPVRNVNVKAFDVQGGKGMIGFFEVELKVRDYELDQYGVVNNAVYASYCQHGRHELFER 559
           +P VR+ +  AFD +GGKGM GF +VELKVRDYELDQYGVVNNAVYASYCQHGRHEL E+
Sbjct: 39  VPAVRSASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLEK 98

Query: 558 MGVSADAVARNGEALALSEMSLKFLGPLRT 469
           +GV+ADAVAR G+ALALSE++LKFL PLR+
Sbjct: 99  IGVNADAVARTGDALALSELTLKFLAPLRS 128



 Score =  115 bits (289), Expect(2) = 4e-60
 Identities = 53/69 (76%), Positives = 65/69 (94%)
 Frame = -3

Query: 452 QSGDRFVVKVRISGSSAARIFFEHAVCKLPNQEPILEAKATAICLDKNYRPVRIPPELRS 273
           +SGDRFVVKVR+S SSAAR++FEH + KLPN+EPILEA+ATA+CLDKNYRPVRIP E+RS
Sbjct: 127 RSGDRFVVKVRVSDSSAARLYFEHFIFKLPNEEPILEARATAVCLDKNYRPVRIPTEIRS 186

Query: 272 KIVQYLRNE 246
           K+VQ+LR+E
Sbjct: 187 KLVQFLRHE 195


>ref|XP_002526988.1| acyl-CoA thioesterase, putative [Ricinus communis]
           gi|223533623|gb|EEF35360.1| acyl-CoA thioesterase,
           putative [Ricinus communis]
          Length = 210

 Score =  140 bits (353), Expect(2) = 3e-58
 Identities = 83/145 (57%), Positives = 102/145 (70%), Gaps = 4/145 (2%)
 Frame = -2

Query: 891 QSLISRLHVSLPPSRAMSSY-NVTYPTK--LLHVSWPSDYSHGKFFLSTRGVQFLPPVRN 721
           Q+ I  + V+ P SRA +++ N+  P+   L  VS P           +  V+ LP V++
Sbjct: 5   QAFIYPMQVTTPLSRANTTWINLHRPSASLLFRVSRPP---------MSPVVRSLPTVKS 55

Query: 720 VNVKAF-DVQGGKGMIGFFEVELKVRDYELDQYGVVNNAVYASYCQHGRHELFERMGVSA 544
               +F D++GGKGM  F  VELKVRDYELDQYGVVNNAVYASYCQHGRHEL ER+GVSA
Sbjct: 56  CRGLSFLDIRGGKGMNSFVGVELKVRDYELDQYGVVNNAVYASYCQHGRHELLERIGVSA 115

Query: 543 DAVARNGEALALSEMSLKFLGPLRT 469
           DAVAR G+ALALSE+SLKFL PLR+
Sbjct: 116 DAVARTGDALALSELSLKFLAPLRS 140



 Score =  112 bits (280), Expect(2) = 3e-58
 Identities = 52/69 (75%), Positives = 65/69 (94%)
 Frame = -3

Query: 452 QSGDRFVVKVRISGSSAARIFFEHAVCKLPNQEPILEAKATAICLDKNYRPVRIPPELRS 273
           +SGDRFVVKVRISGSSAAR++F+H + KLPN+EPILEAKATA+ LDKNYRPVRIP ++RS
Sbjct: 139 RSGDRFVVKVRISGSSAARLYFDHFIFKLPNEEPILEAKATAVWLDKNYRPVRIPSDMRS 198

Query: 272 KIVQYLRNE 246
           K+VQ+L++E
Sbjct: 199 KLVQFLKHE 207


>ref|XP_002283545.2| PREDICTED: uncharacterized protein LOC100250950 [Vitis vinifera]
           gi|297737802|emb|CBI27003.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  136 bits (343), Expect(2) = 2e-56
 Identities = 65/90 (72%), Positives = 79/90 (87%)
 Frame = -2

Query: 738 LPPVRNVNVKAFDVQGGKGMIGFFEVELKVRDYELDQYGVVNNAVYASYCQHGRHELFER 559
           +P VR+ +  AFD +GGKGM GF +VELKVRDYELDQYGVVNNAVYASYCQHGRHEL E+
Sbjct: 39  VPAVRSASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLEK 98

Query: 558 MGVSADAVARNGEALALSEMSLKFLGPLRT 469
           +G++ADAVA  G+A+ALSE++LKFL PLR+
Sbjct: 99  IGLNADAVACIGDAVALSELTLKFLAPLRS 128



 Score =  110 bits (274), Expect(2) = 2e-56
 Identities = 50/69 (72%), Positives = 63/69 (91%)
 Frame = -3

Query: 452 QSGDRFVVKVRISGSSAARIFFEHAVCKLPNQEPILEAKATAICLDKNYRPVRIPPELRS 273
           +SGDRFVVKVR+S +SAAR++FEH + KLPN+EPILEA+AT +CLDKNYRPVRIP E+RS
Sbjct: 127 RSGDRFVVKVRVSDASAARLYFEHFIFKLPNEEPILEARATGVCLDKNYRPVRIPTEIRS 186

Query: 272 KIVQYLRNE 246
            +VQ+LR+E
Sbjct: 187 ILVQFLRHE 195


>ref|XP_003516823.1| PREDICTED: uncharacterized protein LOC100806931 [Glycine max]
          Length = 204

 Score =  134 bits (338), Expect(2) = 2e-54
 Identities = 62/79 (78%), Positives = 73/79 (92%)
 Frame = -2

Query: 705 FDVQGGKGMIGFFEVELKVRDYELDQYGVVNNAVYASYCQHGRHELFERMGVSADAVARN 526
           FD++GGKGM GF +VELKVRDYELDQYGVVNNAVYASYCQHGRHEL + +G++ DAVAR+
Sbjct: 57  FDLRGGKGMSGFHDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLQNIGINCDAVARS 116

Query: 525 GEALALSEMSLKFLGPLRT 469
           G+ALALSE+SLKFL PLR+
Sbjct: 117 GDALALSELSLKFLAPLRS 135



 Score =  105 bits (261), Expect(2) = 2e-54
 Identities = 48/69 (69%), Positives = 62/69 (89%)
 Frame = -3

Query: 452 QSGDRFVVKVRISGSSAARIFFEHAVCKLPNQEPILEAKATAICLDKNYRPVRIPPELRS 273
           +SGD+FVV+VRISGSSAAR++F+H + KLPNQEPILEAKA A+ LDKNYRP+RIP E++S
Sbjct: 134 RSGDKFVVRVRISGSSAARLYFDHFIYKLPNQEPILEAKAIAVWLDKNYRPIRIPAEMKS 193

Query: 272 KIVQYLRNE 246
           K V+++R E
Sbjct: 194 KFVKFIRIE 202


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