BLASTX nr result

ID: Coptis24_contig00017606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017606
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326669.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis ...    63   3e-08
emb|CBI23542.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002531780.1| protein with unknown function [Ricinus commu...    63   3e-08
ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|1...    63   3e-08

>ref|XP_002326669.1| predicted protein [Populus trichocarpa] gi|222833991|gb|EEE72468.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -2

Query: 353 AAEIKNRMASQHSMNSARPPTVQIQGQPVAQNSPCCLS 240
           AAEIKNRMASQ +MN+ARPPTVQI+GQPV QNS CC S
Sbjct: 166 AAEIKNRMASQPAMNNARPPTVQIRGQPVNQNSGCCSS 203


>ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
          Length = 207

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 353 AAEIKNRMASQHSMNSARPPTVQIQGQPVAQNSPCCLS 240
           AAEIKNRMASQ +MN+ARPPTVQI+GQPV Q S CC S
Sbjct: 170 AAEIKNRMASQPAMNTARPPTVQIRGQPVNQKSGCCSS 207


>emb|CBI23542.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 353 AAEIKNRMASQHSMNSARPPTVQIQGQPVAQNSPCCLS 240
           AAEIKNRMASQ +MN+ARPPTVQI+GQPV Q S CC S
Sbjct: 161 AAEIKNRMASQPAMNTARPPTVQIRGQPVNQKSGCCSS 198


>ref|XP_002531780.1| protein with unknown function [Ricinus communis]
           gi|223528573|gb|EEF30594.1| protein with unknown
           function [Ricinus communis]
          Length = 203

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 353 AAEIKNRMASQHSMNSARPPTVQIQGQPVAQNSPCCLS 240
           AAEIKNRMASQ +MN+ARPPTVQI+GQPV Q S CC S
Sbjct: 166 AAEIKNRMASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203


>ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|118485751|gb|ABK94725.1|
           unknown [Populus trichocarpa]
           gi|222841737|gb|EEE79284.1| predicted protein [Populus
           trichocarpa]
          Length = 203

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 353 AAEIKNRMASQHSMNSARPPTVQIQGQPVAQNSPCCLS 240
           AAEIKNRMASQ +MN+ARPPTVQI+GQPV Q S CC S
Sbjct: 166 AAEIKNRMASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203


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