BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017605
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25132.3| unnamed protein product [Vitis vinifera]               93   1e-29
ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methy...    93   1e-29
emb|CAN83371.1| hypothetical protein VITISV_034944 [Vitis vinifera]    93   1e-29
gb|AFK39673.1| unknown [Medicago truncatula]                           87   9e-28
ref|XP_002894226.1| predicted protein [Arabidopsis lyrata subsp....    89   2e-27

>emb|CBI25132.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 92.8 bits (229), Expect(2) = 1e-29
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = -2

Query: 202 LLNNISQSKLSFLAVAEATPLISTLSFKRNEASGLIIIGPEGDFSDKEVKMMTEAGATTV 23
           LL  ++QSKLS +AVAEATP+ S L+  R E++GL+IIGPEGDF++KE+ MM EAGAT V
Sbjct: 319 LLPIVTQSKLSLVAVAEATPVFSVLTSSRRESTGLMIIGPEGDFTEKELNMMREAGATAV 378

Query: 22  GLGPHRL 2
           GLGPHRL
Sbjct: 379 GLGPHRL 385



 Score = 62.4 bits (150), Expect(2) = 1e-29
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -1

Query: 299 ELGASSVTPLLTERSPAISGNRVDRLQRVIFAAAKQ 192
           ELG SSVTPLLTERSP+IS NRVDRLQRVI AAAKQ
Sbjct: 266 ELGTSSVTPLLTERSPSISENRVDRLQRVILAAAKQ 301


>ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Vitis vinifera]
          Length = 287

 Score = 92.8 bits (229), Expect(2) = 1e-29
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = -2

Query: 202 LLNNISQSKLSFLAVAEATPLISTLSFKRNEASGLIIIGPEGDFSDKEVKMMTEAGATTV 23
           LL  ++QSKLS +AVAEATP+ S L+  R E++GL+IIGPEGDF++KE+ MM EAGAT V
Sbjct: 196 LLPIVTQSKLSLVAVAEATPVFSVLTSSRRESTGLMIIGPEGDFTEKELNMMREAGATAV 255

Query: 22  GLGPHRL 2
           GLGPHRL
Sbjct: 256 GLGPHRL 262



 Score = 62.4 bits (150), Expect(2) = 1e-29
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -1

Query: 299 ELGASSVTPLLTERSPAISGNRVDRLQRVIFAAAKQ 192
           ELG SSVTPLLTERSP+IS NRVDRLQRVI AAAKQ
Sbjct: 143 ELGTSSVTPLLTERSPSISENRVDRLQRVILAAAKQ 178


>emb|CAN83371.1| hypothetical protein VITISV_034944 [Vitis vinifera]
          Length = 259

 Score = 92.8 bits (229), Expect(2) = 1e-29
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = -2

Query: 202 LLNNISQSKLSFLAVAEATPLISTLSFKRNEASGLIIIGPEGDFSDKEVKMMTEAGATTV 23
           LL  ++QSKLS +AVAEATP+ S L+  R E++GL+IIGPEGDF++KE+ MM EAGAT V
Sbjct: 168 LLPIVTQSKLSLVAVAEATPVFSVLTSSRRESTGLMIIGPEGDFTEKELNMMREAGATAV 227

Query: 22  GLGPHRL 2
           GLGPHRL
Sbjct: 228 GLGPHRL 234



 Score = 62.4 bits (150), Expect(2) = 1e-29
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -1

Query: 299 ELGASSVTPLLTERSPAISGNRVDRLQRVIFAAAKQ 192
           ELG SSVTPLLTERSP+IS NRVDRLQRVI AAAKQ
Sbjct: 115 ELGTSSVTPLLTERSPSISENRVDRLQRVILAAAKQ 150


>gb|AFK39673.1| unknown [Medicago truncatula]
          Length = 280

 Score = 87.0 bits (214), Expect(2) = 9e-28
 Identities = 41/67 (61%), Positives = 53/67 (79%)
 Frame = -2

Query: 202 LLNNISQSKLSFLAVAEATPLISTLSFKRNEASGLIIIGPEGDFSDKEVKMMTEAGATTV 23
           +L+ I+QSKLS +A AEATP+++ L+    E SGLI++GPEGDF++KEV MM EAGA  V
Sbjct: 195 ILHLIAQSKLSLVATAEATPVLNALTSPEKETSGLIVVGPEGDFTEKEVNMMMEAGAKAV 254

Query: 22  GLGPHRL 2
            LGPHRL
Sbjct: 255 SLGPHRL 261



 Score = 61.6 bits (148), Expect(2) = 9e-28
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = -1

Query: 299 ELGASSVTPLLTERSPAISGNRVDRLQRVIFAAAKQ 192
           ELGASSVTPLLTERSP+IS NRVDRL+RVI AA+KQ
Sbjct: 142 ELGASSVTPLLTERSPSISENRVDRLERVILAASKQ 177


>ref|XP_002894226.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340068|gb|EFH70485.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 295

 Score = 88.6 bits (218), Expect(2) = 2e-27
 Identities = 42/70 (60%), Positives = 55/70 (78%)
 Frame = -2

Query: 211 FLLLLNNISQSKLSFLAVAEATPLISTLSFKRNEASGLIIIGPEGDFSDKEVKMMTEAGA 32
           F  LL +IS+SKL  +A AEATPL++ ++    E SG++I+GPEGDF+ KEV+MM EAG+
Sbjct: 203 FDTLLGHISKSKLCLVATAEATPLLNAVNSSTKETSGILIVGPEGDFTKKEVEMMLEAGS 262

Query: 31  TTVGLGPHRL 2
           T VGLGPHRL
Sbjct: 263 TAVGLGPHRL 272



 Score = 58.9 bits (141), Expect(2) = 2e-27
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -1

Query: 299 ELGASSVTPLLTERSPAISGNRVDRLQRVIFAAAKQ 192
           ELGASSVTPLLTERS  IS NRVDRL+RV FAAAKQ
Sbjct: 153 ELGASSVTPLLTERSSIISENRVDRLERVSFAAAKQ 188