BLASTX nr result

ID: Coptis24_contig00017602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017602
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [V...   176   2e-42
gb|AFK48825.1| unknown [Lotus japonicus]                              172   3e-41
ref|XP_004173321.1| PREDICTED: transcription factor ILR3-like [C...   169   3e-40
ref|XP_004151962.1| PREDICTED: transcription factor ILR3-like [C...   168   4e-40
ref|XP_003607701.1| Transcription factor ILR3 [Medicago truncatu...   166   1e-39

>ref|XP_002274829.2| PREDICTED: transcription factor ILR3-like [Vitis vinifera]
          Length = 240

 Score =  176 bits (445), Expect = 2e-42
 Identities = 90/133 (67%), Positives = 108/133 (81%), Gaps = 3/133 (2%)
 Frame = -1

Query: 391 NSNWLNDYDLIMDGISVPVGDFIPP-PVTAFEWPSQPLNALSNVEMEAP--FGDTDGIKE 221
           NSNWL DY L M+ I+VP G+F  P P T F WPSQ L + S+V +EA   FGD+DG+KE
Sbjct: 8   NSNWLFDYGL-MEDITVPGGEFPEPTPGTGFSWPSQALKSSSSVSLEADCSFGDSDGLKE 66

Query: 220 TGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILSDAVRM 41
            G +KR + E+C A+G+KACREK+RRD+LNERF+ELGSILEPGRPPK DKAAILSDAVRM
Sbjct: 67  LGPRKRLKHESCGATGTKACREKLRRDRLNERFLELGSILEPGRPPKTDKAAILSDAVRM 126

Query: 40  VTQLRGESEKLKE 2
           VTQLR E++KLKE
Sbjct: 127 VTQLRSEAQKLKE 139


>gb|AFK48825.1| unknown [Lotus japonicus]
          Length = 238

 Score =  172 bits (435), Expect = 3e-41
 Identities = 94/140 (67%), Positives = 110/140 (78%), Gaps = 4/140 (2%)
 Frame = -1

Query: 409 MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPS-QPLNALSNV---EMEAPFG 242
           MVS EN +NWL DY LI D I  P   F  PP + F WPS QPLN+ SNV   E++   G
Sbjct: 1   MVSREN-TNWLFDYGLI-DDIPAPEVTFTVPP-SGFTWPSSQPLNSSSNVVGVEIDGSLG 57

Query: 241 DTDGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAI 62
           D+D +KE GSKKR RSE+CSA+ SKACREK+RRDKLN++FVELGSILEPGRPPK DKAAI
Sbjct: 58  DSDSLKEPGSKKRVRSESCSATSSKACREKLRRDKLNDKFVELGSILEPGRPPKTDKAAI 117

Query: 61  LSDAVRMVTQLRGESEKLKE 2
           L DAVRMVTQLRGE++K+K+
Sbjct: 118 LIDAVRMVTQLRGEAQKMKD 137


>ref|XP_004173321.1| PREDICTED: transcription factor ILR3-like [Cucumis sativus]
          Length = 235

 Score =  169 bits (427), Expect = 3e-40
 Identities = 91/138 (65%), Positives = 106/138 (76%), Gaps = 2/138 (1%)
 Frame = -1

Query: 409 MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQPLNAL--SNVEMEAPFGDT 236
           MVSPEN  NWL DY LI D I VP G+F P   ++F WP QP N    S VE++    D 
Sbjct: 1   MVSPEN-PNWLFDYGLIED-IPVPDGNF-PVASSSFSWPIQPFNGAHDSGVEIDGSLADL 57

Query: 235 DGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILS 56
           DG  E+GSKKR RS++CSAS SKACREK+RRD+LN++F+ELGSIL+PGRPPK DKAAIL 
Sbjct: 58  DGRLESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILV 117

Query: 55  DAVRMVTQLRGESEKLKE 2
           DAVRMV QLRGE+EKLKE
Sbjct: 118 DAVRMVNQLRGETEKLKE 135


>ref|XP_004151962.1| PREDICTED: transcription factor ILR3-like [Cucumis sativus]
          Length = 235

 Score =  168 bits (426), Expect = 4e-40
 Identities = 91/138 (65%), Positives = 106/138 (76%), Gaps = 2/138 (1%)
 Frame = -1

Query: 409 MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQPLNAL--SNVEMEAPFGDT 236
           MVSPEN  NWL DY LI D I VP G+F P   ++F WP QP N    S VE++    D 
Sbjct: 1   MVSPEN-PNWLFDYGLIED-IPVPDGNF-PVTSSSFSWPIQPFNGSHDSGVEIDGSLADL 57

Query: 235 DGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAILS 56
           DG  E+GSKKR RS++CSAS SKACREK+RRD+LN++F+ELGSIL+PGRPPK DKAAIL 
Sbjct: 58  DGHLESGSKKRVRSDSCSASSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILV 117

Query: 55  DAVRMVTQLRGESEKLKE 2
           DAVRMV QLRGE+EKLKE
Sbjct: 118 DAVRMVNQLRGETEKLKE 135


>ref|XP_003607701.1| Transcription factor ILR3 [Medicago truncatula]
           gi|217071746|gb|ACJ84233.1| unknown [Medicago
           truncatula] gi|355508756|gb|AES89898.1| Transcription
           factor ILR3 [Medicago truncatula]
           gi|388493018|gb|AFK34575.1| unknown [Medicago
           truncatula]
          Length = 237

 Score =  166 bits (421), Expect = 1e-39
 Identities = 89/139 (64%), Positives = 109/139 (78%), Gaps = 3/139 (2%)
 Frame = -1

Query: 409 MVSPENNSNWLNDYDLIMDGISVPVGDFIPPPVTAFEWPSQP-LNALSNV--EMEAPFGD 239
           MVS EN +NW+NDY    D I VP   F  P  +AF WP+QP  N  SNV  E++   GD
Sbjct: 1   MVSREN-TNWINDYGFY-DDIPVPDSTFALPS-SAFTWPTQPPFNLSSNVSAEVDGSLGD 57

Query: 238 TDGIKETGSKKRARSEACSASGSKACREKMRRDKLNERFVELGSILEPGRPPKLDKAAIL 59
           +DG+KE+GSKKR RSE+C+A+ SKACREK+RRD+LN++F+ELGSILEPGRP K DKAAIL
Sbjct: 58  SDGLKESGSKKRVRSESCAATSSKACREKLRRDRLNDKFIELGSILEPGRPAKTDKAAIL 117

Query: 58  SDAVRMVTQLRGESEKLKE 2
            DAVRMVTQLRGE++KLK+
Sbjct: 118 IDAVRMVTQLRGEAQKLKD 136


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