BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017599
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611209.1| Ycf49-like protein [Medicago truncatula] gi|...    61   8e-08
ref|XP_003611210.1| 60S ribosomal export protein NMD3 [Medicago ...    60   1e-07
ref|XP_003631430.1| PREDICTED: ycf49-like protein-like [Vitis vi...    57   2e-06
emb|CBI34804.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_004147956.1| PREDICTED: ycf49-like protein-like [Cucumis ...    55   6e-06

>ref|XP_003611209.1| Ycf49-like protein [Medicago truncatula]
           gi|355512544|gb|AES94167.1| Ycf49-like protein [Medicago
           truncatula]
          Length = 172

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   VLVALQAALTVIGNFTMCIAAFRIYKSSQGGSENL 105
           VLVALQAALTVIGNFTMCIAA+RIYKSS+  SEN+
Sbjct: 138 VLVALQAALTVIGNFTMCIAAYRIYKSSRESSENI 172


>ref|XP_003611210.1| 60S ribosomal export protein NMD3 [Medicago truncatula]
           gi|355512545|gb|AES94168.1| 60S ribosomal export protein
           NMD3 [Medicago truncatula]
          Length = 669

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   VLVALQAALTVIGNFTMCIAAFRIYKSSQGGSENL 105
           VLVALQAALTVIGNFTMC+AA+RIYKSS+  SEN+
Sbjct: 635 VLVALQAALTVIGNFTMCLAAYRIYKSSRESSENI 669


>ref|XP_003631430.1| PREDICTED: ycf49-like protein-like [Vitis vinifera]
          Length = 181

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   VLVALQAALTVIGNFTMCIAAFRIYKSSQGGSENL 105
           VLVALQAALTV+GN TMCIAAFRIY+SSQ  S+NL
Sbjct: 147 VLVALQAALTVLGNATMCIAAFRIYQSSQERSKNL 181


>emb|CBI34804.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   VLVALQAALTVIGNFTMCIAAFRIYKSSQGGSENL 105
           VLVALQAALTV+GN TMCIAAFRIY+SSQ  S+NL
Sbjct: 103 VLVALQAALTVLGNATMCIAAFRIYQSSQERSKNL 137


>ref|XP_004147956.1| PREDICTED: ycf49-like protein-like [Cucumis sativus]
           gi|449494281|ref|XP_004159501.1| PREDICTED: ycf49-like
           protein-like [Cucumis sativus]
          Length = 186

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   VLVALQAALTVIGNFTMCIAAFRIYKSSQGGSENL 105
           VLVA+QA LT IGN TMCIAAFRIYKSSQ  S+NL
Sbjct: 152 VLVAIQAMLTAIGNATMCIAAFRIYKSSQERSKNL 186