BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017597
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]   354   9e-96
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...   354   1e-95
ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2...   339   4e-91
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,...   335   5e-90
ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containi...   325   8e-87

>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score =  354 bits (909), Expect = 9e-96
 Identities = 170/248 (68%), Positives = 211/248 (85%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           FK+ME++G SPT+ S+NTLIAGYCN GL++SGMKLK  M K+G +P+ +T+NTLI+G+C+
Sbjct: 204 FKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCR 263

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
             KL++A++IF+EMK  DV PNT+TYNTLINGYSQVGN+EM GRL++EML +G+KADI+T
Sbjct: 264 GGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILT 323

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           YNALILGLC EG+TK AAYLVKELD+ENLVPN+STFS LI GQCVR+NSERAFQ+YKSM 
Sbjct: 324 YNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMI 383

Query: 204 KSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEGLRRYRKFN 25
           +SGCHPN +TFKMLISTFCKN+DFDGAV+V+ EM ER + P+S  L ELC GL    K  
Sbjct: 384 RSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEE 443

Query: 24  LATKVCTD 1
           LA K+C +
Sbjct: 444 LALKLCKE 451



 Score =  101 bits (252), Expect = 1e-19
 Identities = 56/186 (30%), Positives = 97/186 (52%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F EM++    P   ++NTLI GY  +G  + G +L + M ++G + +I+TYN LI G C 
Sbjct: 274 FSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCM 333

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
           E +   A+ +  E+   ++ PN+ T++ LI G     N+E + +LY+ M+  G   +  T
Sbjct: 334 EGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHT 393

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           +  LI   CK      A  +V+E+ + ++ P++ T S L  G  +    E A ++ K M+
Sbjct: 394 FKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEME 453

Query: 204 KSGCHP 187
                P
Sbjct: 454 MKHLMP 459



 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 42/180 (23%), Positives = 85/180 (47%)
 Frame = -2

Query: 615 CQPNIITYNTLIHGYCKEEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSG 436
           C  +   +++L   Y + +KL +A  +F +MK     P   + N  I+    +   +++ 
Sbjct: 107 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 166

Query: 435 RLYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQ 256
             Y EM  + +  ++ T N ++   CK GK + A  + K+++     P  ++++ LI G 
Sbjct: 167 TFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGY 226

Query: 255 CVRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPES 76
           C +       ++   M+K+G  P+  TF  LI+ FC+      A ++ +EM    + P +
Sbjct: 227 CNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNT 286



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
 Frame = -2

Query: 699 FNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCKEEKLNDASRIFNEMK 520
           F++L   Y  +  + + + +   M   G  P + + N  I      ++ + A   + EM+
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 173

Query: 519 TVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVTYNALILGLCKEGKTK 340
              ++PN  T N ++  + + G  E +  ++++M   G    I +YN LI G C +G   
Sbjct: 174 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLN 233

Query: 339 NAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMKKSGCHPNSNTFKMLI 160
           +   L   ++K  + P+  TF+ LI G C       A +I+  MK +   PN+ T+  LI
Sbjct: 234 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 293

Query: 159 STFCK--NDDFDGAV--QVLNEMMERCLTPESGLLVELC 55
           + + +  N +  G +  ++L   ++  +   + L++ LC
Sbjct: 294 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC 332


>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
            mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  354 bits (908), Expect = 1e-95
 Identities = 170/248 (68%), Positives = 210/248 (84%)
 Frame = -2

Query: 744  FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
            FK ME++G SPT+ S+NTLIAGYCN GL++SGMKLK  M K+G +P+ +T+NTLI+G+C+
Sbjct: 337  FKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCR 396

Query: 564  EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
              KL++A++IF+EMK  DV PNT+TYNTLINGYSQVGN+EM GRL++EML +G+KADI+T
Sbjct: 397  GGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILT 456

Query: 384  YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
            YNALILGLC EG+TK AAYLVKELD+ENLVPN+STFS LI GQCVR+NSERAFQ+YKSM 
Sbjct: 457  YNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMI 516

Query: 204  KSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEGLRRYRKFN 25
            +SGCHPN +TFKMLISTFCKN+DFDGAV+V+ EM ER + P+S  L ELC GL    K  
Sbjct: 517  RSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEE 576

Query: 24   LATKVCTD 1
            LA K+C +
Sbjct: 577  LALKLCKE 584



 Score =  101 bits (252), Expect = 1e-19
 Identities = 56/186 (30%), Positives = 97/186 (52%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F EM++    P   ++NTLI GY  +G  + G +L + M ++G + +I+TYN LI G C 
Sbjct: 407 FSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCM 466

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
           E +   A+ +  E+   ++ PN+ T++ LI G     N+E + +LY+ M+  G   +  T
Sbjct: 467 EGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHT 526

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           +  LI   CK      A  +V+E+ + ++ P++ T S L  G  +    E A ++ K M+
Sbjct: 527 FKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEME 586

Query: 204 KSGCHP 187
                P
Sbjct: 587 MKHLMP 592



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
 Frame = -2

Query: 705 ESFNTLIAGYCNLGLVDSGMKLKNTMGKSG--CQPNIITYNTLIHGYCKEEKLNDASRIF 532
           +S  +++ G    G +D   KL   +  S   C  +   +++L   Y + +KL +A  +F
Sbjct: 208 KSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVF 267

Query: 531 NEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVTYNALILGLCKE 352
            +MK     P   + N  I+    +   +++   Y EM  + +  ++ T N ++   CK 
Sbjct: 268 CQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKW 327

Query: 351 GKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMKKSGCHPNSNTF 172
           GK + A  + K ++     P  ++++ LI G C +       ++   M+K+G  P+  TF
Sbjct: 328 GKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTF 387

Query: 171 KMLISTFCKNDDFDGAVQVLNEMMERCLTPES 76
             LI+ FC+      A ++ +EM    + P +
Sbjct: 388 NTLINGFCRGGKLHEANKIFSEMKANDVVPNT 419



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
 Frame = -2

Query: 699 FNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCKEEKLNDASRIFNEMK 520
           F++L   Y  +  + + + +   M   G  P + + N  I      ++ + A   + EM+
Sbjct: 247 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 306

Query: 519 TVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVTYNALILGLCKEGKTK 340
              ++PN  T N ++  + + G  E +  +++ M   G    I +YN LI G C +G   
Sbjct: 307 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLN 366

Query: 339 NAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMKKSGCHPNSNTFKMLI 160
           +   L   ++K  + P+  TF+ LI G C       A +I+  MK +   PN+ T+  LI
Sbjct: 367 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 426

Query: 159 STFCK--NDDFDGAV--QVLNEMMERCLTPESGLLVELC 55
           + + +  N +  G +  ++L   ++  +   + L++ LC
Sbjct: 427 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC 465



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 41/158 (25%), Positives = 68/158 (43%)
 Frame = -2

Query: 738 EMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCKEE 559
           EM   G    + ++N LI G C  G       L   + +    PN  T++ LI G C  +
Sbjct: 444 EMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRK 503

Query: 558 KLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVTYN 379
               A +++  M      PN  T+  LI+ + +  + + +  +  EM    +  D  T +
Sbjct: 504 NSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLS 563

Query: 378 ALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLI 265
            L  GL   GK + A  L KE++ ++L+P     S  I
Sbjct: 564 ELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTI 601


>ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  339 bits (869), Expect = 4e-91
 Identities = 160/245 (65%), Positives = 202/245 (82%)
 Frame = -2

Query: 741 KEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCKE 562
           +EMESVG +P + S+NTLIAG+CN GL+    KLKN MGK+G +PN++T+N+LIHG+CKE
Sbjct: 223 REMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKE 282

Query: 561 EKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVTY 382
            KL++A+R F+EMK ++V PNTVTYNTLINGY QVGN+ M+G++YEEM+ +GVKADI+TY
Sbjct: 283 GKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTY 342

Query: 381 NALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMKK 202
           NALILGLCKEGKTK AA+LVKELDKENLVPNAST+S LI GQC R+NS+RAFQ+YKSM +
Sbjct: 343 NALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVR 402

Query: 201 SGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEGLRRYRKFNL 22
           SGCHPN  TFKML S F KN+DF+GA  VL +M  R +  +S  L+E+ +GL +  K NL
Sbjct: 403 SGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENL 462

Query: 21  ATKVC 7
           A K+C
Sbjct: 463 AMKLC 467



 Score =  129 bits (323), Expect = 8e-28
 Identities = 73/232 (31%), Positives = 115/232 (49%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F  M+  G  PT+ES N  ++   +   VD  +     M +    PN  T+N ++   CK
Sbjct: 152 FSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCK 211

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
             KL  A  +  EM++V + PN V+YNTLI G+   G   ++ +L   M  +G++ ++VT
Sbjct: 212 SGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVT 271

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           +N+LI G CKEGK   A     E+   N+ PN  T++ LI G     NS  A ++Y+ M 
Sbjct: 272 FNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMM 331

Query: 204 KSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEG 49
           ++G   +  T+  LI   CK      A  ++ E+ +  L P +     L  G
Sbjct: 332 RNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISG 383



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 4/227 (1%)
 Frame = -2

Query: 720 CSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCKEEKLNDAS 541
           C  +   F++L   Y ++    +   + + M   G  P + + N  +       +++ A 
Sbjct: 125 CDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIAL 184

Query: 540 RIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVTYNALILGL 361
             + EM+   ++PN+ T+N +++   + G  E +  +  EM   G+  ++V+YN LI G 
Sbjct: 185 TFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGH 244

Query: 360 CKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMKKSGCHPNS 181
           C +G    A  L   + K  L PN  TF++LI G C       A + +  MK     PN+
Sbjct: 245 CNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNT 304

Query: 180 NTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPE----SGLLVELCE 52
            T+  LI+ + +  + + A +V  EMM   +  +    + L++ LC+
Sbjct: 305 VTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCK 351



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 52/202 (25%), Positives = 91/202 (45%)
 Frame = -2

Query: 615 CQPNIITYNTLIHGYCKEEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSG 436
           C  +   +++L   Y    K  +A+ +F+ MK     P   + N  ++        +++ 
Sbjct: 125 CDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIAL 184

Query: 435 RLYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQ 256
             Y EM    +  +  T+N ++  LCK GK + A  +++E++   + PN  +++ LI G 
Sbjct: 185 TFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGH 244

Query: 255 CVRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPES 76
           C +     A ++   M K+G  PN  TF  LI  FCK      A +  +EM    +TP +
Sbjct: 245 CNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNT 304

Query: 75  GLLVELCEGLRRYRKFNLATKV 10
                L  G  +    N+A KV
Sbjct: 305 VTYNTLINGYGQVGNSNMAGKV 326



 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F EM+ +  +P   ++NTLI GY  +G  +   K+   M ++G + +I+TYN LI G CK
Sbjct: 292 FSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCK 351

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
           E K   A+ +  E+   ++ PN  TY+ LI+G     N++ + +LY+ M+  G   +  T
Sbjct: 352 EGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQT 411

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMG--QCVRQN 241
           +  L     K    + A  ++ ++   ++  +++T   +  G  QC ++N
Sbjct: 412 FKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKEN 461



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 39/151 (25%), Positives = 66/151 (43%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           ++EM   G    + ++N LI G C  G       L   + K    PN  TY+ LI G C 
Sbjct: 327 YEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCA 386

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
            +  + A +++  M      PN  T+  L + + +  + E +  +  +M    + +D  T
Sbjct: 387 RKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNT 446

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVP 292
              +  GLC+ GK   A  L  E++   L+P
Sbjct: 447 LLEIYDGLCQCGKENLAMKLCHEMEARRLIP 477


>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  335 bits (860), Expect = 5e-90
 Identities = 162/248 (65%), Positives = 201/248 (81%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F+EMESVG SP   S+NTLI GYC  GL++S +KLKN+M   G + N++T+N+LI G+CK
Sbjct: 239 FEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCK 298

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
           E KL++AS++F+EMK ++VAPNT+TYNTLING+SQ+GN+EM  RLYEEM  +GVKADI+T
Sbjct: 299 EGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILT 358

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           YNALILGLCKEGKTK AAY+VKELDKENLVPNASTFS LI GQC+R NS+RAFQ+YKSM 
Sbjct: 359 YNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMV 418

Query: 204 KSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEGLRRYRKFN 25
           + GCHPN  TF ML+S FCKN+DF+GA  VL EM ERC TP S +L E+  GL    K +
Sbjct: 419 RIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEH 478

Query: 24  LATKVCTD 1
           LA K+ ++
Sbjct: 479 LAMKLSSE 486



 Score =  143 bits (361), Expect = 3e-32
 Identities = 77/232 (33%), Positives = 122/232 (52%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F +M+  G  PT+ES N  ++   +L  VD  +     M +    PN+ T N ++  +CK
Sbjct: 169 FLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCK 228

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
             KL  A ++F EM++V ++PN  +YNTLI GY + G    + +L   M   GV+A++VT
Sbjct: 229 SGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVT 288

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           +N+LI G CKEGK   A+ +  E+   N+ PN  T++ LI G     NSE   ++Y+ M 
Sbjct: 289 FNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMS 348

Query: 204 KSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEG 49
           ++G   +  T+  LI   CK      A  ++ E+ +  L P +     L  G
Sbjct: 349 RNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISG 400



 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 51/180 (28%), Positives = 92/180 (51%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F EM+ +  +P   ++NTLI G+  +G  + G +L   M ++G + +I+TYN LI G CK
Sbjct: 309 FSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCK 368

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
           E K   A+ +  E+   ++ PN  T++ LI+G     N++ + +LY+ M+  G   +  T
Sbjct: 369 EGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQT 428

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           +N L+   CK    + A  ++ E+ +    P +   S +  G C       A ++   +K
Sbjct: 429 FNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELK 488



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 44/180 (24%), Positives = 83/180 (46%)
 Frame = -2

Query: 615 CQPNIITYNTLIHGYCKEEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSG 436
           C  +   +++L       +K  +A+  F +MK     P   + N  ++    +   +++ 
Sbjct: 142 CDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIAL 201

Query: 435 RLYEEMLVHGVKADIVTYNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQ 256
             Y+EM    +  ++ T N ++   CK GK + A  + +E++   + PN ++++ LIMG 
Sbjct: 202 AFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGY 261

Query: 255 CVRQNSERAFQIYKSMKKSGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPES 76
           C +     A ++  SM+  G   N  TF  LI  FCK      A +V +EM    + P +
Sbjct: 262 CRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNT 321


>ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356526065|ref|XP_003531640.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 522

 Score =  325 bits (832), Expect = 8e-87
 Identities = 154/247 (62%), Positives = 199/247 (80%)
 Frame = -2

Query: 741 KEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCKE 562
           ++M  +G SP + SFNTLI+GYCN GL    +K+K+ M ++G QPN++T+NTLI+G+CKE
Sbjct: 249 EKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKE 308

Query: 561 EKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVTY 382
            KL++A+R+FNEMK  +V P+ VTYNTL+NGY QVG++EM  R+YEEM+ +G+KADI+TY
Sbjct: 309 RKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTY 368

Query: 381 NALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMKK 202
           NALILGLCK+GKTK AA  V+ELDKENLVPNASTFS LI GQCVR NSERAF IY+SM +
Sbjct: 369 NALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVR 428

Query: 201 SGCHPNSNTFKMLISTFCKNDDFDGAVQVLNEMMERCLTPESGLLVELCEGLRRYRKFNL 22
           SGC PN  TF+MLIS FCKN+DFDGAVQVL +M+ R ++P+   + ELC+GL R  K  L
Sbjct: 429 SGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQL 488

Query: 21  ATKVCTD 1
           A  +C++
Sbjct: 489 ALALCSE 495



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 54/202 (26%), Positives = 99/202 (49%)
 Frame = -2

Query: 744 FKEMESVGCSPTLESFNTLIAGYCNLGLVDSGMKLKNTMGKSGCQPNIITYNTLIHGYCK 565
           F EM+     P++ ++NTL+ GY  +G  + G+++   M ++G + +I+TYN LI G CK
Sbjct: 318 FNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCK 377

Query: 564 EEKLNDASRIFNEMKTVDVAPNTVTYNTLINGYSQVGNNEMSGRLYEEMLVHGVKADIVT 385
           + K   A+    E+   ++ PN  T++ LI G     N+E +  +Y  M+  G   +  T
Sbjct: 378 DGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQT 437

Query: 384 YNALILGLCKEGKTKNAAYLVKELDKENLVPNASTFSNLIMGQCVRQNSERAFQIYKSMK 205
           +  LI   CK      A  +++++    + P+ ST S L  G C    ++ A  +   M+
Sbjct: 438 FQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEME 497

Query: 204 KSGCHPNSNTFKMLISTFCKND 139
                P+    + +  T  +N+
Sbjct: 498 VRRLLPDGFDKEKIAITHPENE 519