BLASTX nr result

ID: Coptis24_contig00017596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017596
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...    58   7e-07

>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 906

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
 Frame = +1

Query: 1   LRTLSKVVLDRDGGKGCQIGELKLLDHIQGELRIEGLGQVA---DSIEAVLKKKEKLRSL 171
           LRTLSK  +  +  +GC +GELK L+H++G L I GL +V    + +EA LK KE LRSL
Sbjct: 671 LRTLSKFCIG-ENREGCNVGELKNLNHLRGHLEISGLEKVRNVNEVMEANLKNKEHLRSL 729

Query: 172 DLRFS 186
           DL FS
Sbjct: 730 DLAFS 734


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