BLASTX nr result
ID: Coptis24_contig00017581
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017581
(567 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265505.1| PREDICTED: lipoxygenase 6, choloroplastic [V... 120 2e-27
ref|XP_002314548.1| predicted protein [Populus trichocarpa] gi|2... 116 7e-27
ref|XP_004135305.1| PREDICTED: lipoxygenase 6, choloroplastic-li... 116 9e-27
ref|XP_002311724.1| predicted protein [Populus trichocarpa] gi|2... 114 3e-26
ref|XP_003531186.1| PREDICTED: lipoxygenase 6, choloroplastic-li... 113 2e-25
>ref|XP_002265505.1| PREDICTED: lipoxygenase 6, choloroplastic [Vitis vinifera]
gi|297738375|emb|CBI27576.3| unnamed protein product
[Vitis vinifera]
Length = 920
Score = 120 bits (300), Expect(2) = 2e-27
Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 23/143 (16%)
Frame = +2
Query: 95 WYPSHNGLE---------LWIAAGQHATIKLWPMPLWRVCXXXXXXXXXXXX-------- 223
W+P N E +WIA+GQHA I P
Sbjct: 745 WWPKLNTKEHLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPHEDDSAYE 804
Query: 224 ------QTAFLSSIPTQLQARKVMAVQDTLSTHFPDEEYVGQQHHLHNHWIDDTEILRLS 385
Q+ FLSS+PTQLQA KVMAVQDTLSTH PDEEY+GQ HHLH+HWI D E+L +
Sbjct: 805 KFLLNPQSTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQTHHLHSHWIKDPEVLDMF 864
Query: 386 RKFISELEEVEDIINTRNKDIRL 454
+KF ++LEE+E+II RNK+I L
Sbjct: 865 KKFSAKLEEIEEIIKGRNKNIHL 887
Score = 27.7 bits (60), Expect(2) = 2e-27
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 448 TSEPRVTGSGIPNSVSI 498
+S P VTG GIPNS+SI
Sbjct: 904 SSGPGVTGRGIPNSISI 920
Score = 107 bits (266), Expect = 2e-21
Identities = 50/74 (67%), Positives = 58/74 (78%)
Frame = +3
Query: 3 QAWWDEIKSKSHYDKRNETW*PKLQTKKDLSGILATMVWNFG*QQGSMRP*NFGQCRFGG 182
QAWW+EIK++ HYDKRNE+W PKL TK+ LSGIL TM+W Q ++ NFGQ FGG
Sbjct: 726 QAWWNEIKNEGHYDKRNESWWPKLNTKEHLSGILTTMIWIASGQHAAI---NFGQYPFGG 782
Query: 183 YVPNRPTLMRKLIP 224
YVPNRPTLMRKLIP
Sbjct: 783 YVPNRPTLMRKLIP 796
>ref|XP_002314548.1| predicted protein [Populus trichocarpa] gi|222863588|gb|EEF00719.1|
predicted protein [Populus trichocarpa]
Length = 825
Score = 116 bits (291), Expect(2) = 7e-27
Identities = 65/143 (45%), Positives = 81/143 (56%), Gaps = 23/143 (16%)
Frame = +2
Query: 95 WYPSHNGLE---------LWIAAGQHATIKLWPMP--------------LWRVCXXXXXX 205
W+P N E +WIA+GQHA I P L +
Sbjct: 650 WWPKLNTKEDLSGILTTIIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPLENEHDYE 709
Query: 206 XXXXXXQTAFLSSIPTQLQARKVMAVQDTLSTHFPDEEYVGQQHHLHNHWIDDTEILRLS 385
Q FLSS+PTQLQA KVMA QDTLSTH PDEEY+GQ HLH+HWI+D +I+ L
Sbjct: 710 KFIRNPQLTFLSSLPTQLQATKVMATQDTLSTHSPDEEYLGQVSHLHSHWINDHDIVELF 769
Query: 386 RKFISELEEVEDIINTRNKDIRL 454
+F + LEE+E+II+ RNKD+RL
Sbjct: 770 NRFSARLEEIEEIIHLRNKDVRL 792
Score = 29.3 bits (64), Expect(2) = 7e-27
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 448 TSEPRVTGSGIPNSVSI 498
TS P VTG GIPNS+SI
Sbjct: 809 TSGPGVTGRGIPNSISI 825
Score = 106 bits (265), Expect = 2e-21
Identities = 49/74 (66%), Positives = 57/74 (77%)
Frame = +3
Query: 3 QAWWDEIKSKSHYDKRNETW*PKLQTKKDLSGILATMVWNFG*QQGSMRP*NFGQCRFGG 182
Q WWDEIK+K H+DKRNE W PKL TK+DLSGIL T++W Q ++ NFGQ FGG
Sbjct: 631 QTWWDEIKNKGHFDKRNEPWWPKLNTKEDLSGILTTIIWIASGQHAAI---NFGQYPFGG 687
Query: 183 YVPNRPTLMRKLIP 224
YVPNRPTL+RKLIP
Sbjct: 688 YVPNRPTLLRKLIP 701
>ref|XP_004135305.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Cucumis sativus]
gi|449494883|ref|XP_004159673.1| PREDICTED: lipoxygenase
6, choloroplastic-like [Cucumis sativus]
Length = 928
Score = 116 bits (290), Expect(2) = 9e-27
Identities = 65/143 (45%), Positives = 77/143 (53%), Gaps = 23/143 (16%)
Frame = +2
Query: 95 WYPSHNGLE---------LWIAAGQHATIKLWPMPLWRVCXXXXXXXXXXXX-------- 223
W+P N E +W+A+GQHA I P
Sbjct: 753 WWPELNNKEDLSGILTTMIWVASGQHAAINFGQYPFGSYVPNRPTLMRKLIPHEDDRDYE 812
Query: 224 ------QTAFLSSIPTQLQARKVMAVQDTLSTHFPDEEYVGQQHHLHNHWIDDTEILRLS 385
Q FLSS+PT+LQA KVMAVQDTLSTH PDEEY+GQ + LH HWIDD +L L
Sbjct: 813 NFIANPQLTFLSSLPTKLQATKVMAVQDTLSTHSPDEEYLGQVNQLHRHWIDDRRVLELF 872
Query: 386 RKFISELEEVEDIINTRNKDIRL 454
KF S+LEE+E+II RNKD RL
Sbjct: 873 NKFSSKLEEIEEIIKCRNKDDRL 895
Score = 29.3 bits (64), Expect(2) = 9e-27
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 448 TSEPRVTGSGIPNSVSI 498
TS P VTG GIPNS+SI
Sbjct: 912 TSGPGVTGRGIPNSISI 928
Score = 99.8 bits (247), Expect = 3e-19
Identities = 47/74 (63%), Positives = 54/74 (72%)
Frame = +3
Query: 3 QAWWDEIKSKSHYDKRNETW*PKLQTKKDLSGILATMVWNFG*QQGSMRP*NFGQCRFGG 182
QAWW EIK K H++KRNE W P+L K+DLSGIL TM+W Q ++ NFGQ FG
Sbjct: 734 QAWWSEIKLKGHHEKRNEPWWPELNNKEDLSGILTTMIWVASGQHAAI---NFGQYPFGS 790
Query: 183 YVPNRPTLMRKLIP 224
YVPNRPTLMRKLIP
Sbjct: 791 YVPNRPTLMRKLIP 804
>ref|XP_002311724.1| predicted protein [Populus trichocarpa] gi|222851544|gb|EEE89091.1|
predicted protein [Populus trichocarpa]
Length = 924
Score = 114 bits (286), Expect(2) = 3e-26
Identities = 62/125 (49%), Positives = 74/125 (59%), Gaps = 14/125 (11%)
Frame = +2
Query: 122 LWIAAGQHATIKLWPMP--------------LWRVCXXXXXXXXXXXXQTAFLSSIPTQL 259
+WIA+GQHA I P L + Q FLSS+PTQL
Sbjct: 767 IWIASGQHAAINFGQYPFGGYVPSRPTLMRKLIPLENEHDHEKFIRNPQHTFLSSLPTQL 826
Query: 260 QARKVMAVQDTLSTHFPDEEYVGQQHHLHNHWIDDTEILRLSRKFISELEEVEDIINTRN 439
QA K+MA QDTLSTH PDEEY+GQ HLH+HWI+D EI+ L +F + LEE+E IIN RN
Sbjct: 827 QATKIMAAQDTLSTHSPDEEYLGQVSHLHSHWINDHEIVELFNRFSARLEEIEGIINLRN 886
Query: 440 KDIRL 454
KD RL
Sbjct: 887 KDARL 891
Score = 29.3 bits (64), Expect(2) = 3e-26
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 448 TSEPRVTGSGIPNSVSI 498
TS P VTG GIPNS+SI
Sbjct: 908 TSGPGVTGRGIPNSISI 924
Score = 103 bits (258), Expect = 1e-20
Identities = 48/74 (64%), Positives = 58/74 (78%)
Frame = +3
Query: 3 QAWWDEIKSKSHYDKRNETW*PKLQTKKDLSGILATMVWNFG*QQGSMRP*NFGQCRFGG 182
QAWW+EIK+K H+DKR+E W PKL TK+D+SGIL TM+W Q ++ NFGQ FGG
Sbjct: 730 QAWWNEIKNKGHFDKRSEPWWPKLDTKEDVSGILTTMIWIASGQHAAI---NFGQYPFGG 786
Query: 183 YVPNRPTLMRKLIP 224
YVP+RPTLMRKLIP
Sbjct: 787 YVPSRPTLMRKLIP 800
>ref|XP_003531186.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Glycine max]
Length = 921
Score = 113 bits (283), Expect(2) = 2e-25
Identities = 63/125 (50%), Positives = 72/125 (57%), Gaps = 14/125 (11%)
Frame = +2
Query: 122 LWIAAGQHATIKLWPMPLWRVCXXXXXXXXXXXXQT--------------AFLSSIPTQL 259
+WIA+GQHA I P Q FLSS+PTQL
Sbjct: 764 IWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQENDPDYEKFIQNPQLVFLSSLPTQL 823
Query: 260 QARKVMAVQDTLSTHFPDEEYVGQQHHLHNHWIDDTEILRLSRKFISELEEVEDIINTRN 439
QA KVMAVQDTLSTH PDEEY+GQ L NHWI+D EI+ L KF + LEE+E+IIN RN
Sbjct: 824 QATKVMAVQDTLSTHSPDEEYLGQLKPLQNHWINDHEIMELFNKFSARLEEIEEIINARN 883
Query: 440 KDIRL 454
KD RL
Sbjct: 884 KDPRL 888
Score = 27.7 bits (60), Expect(2) = 2e-25
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 448 TSEPRVTGSGIPNSVSI 498
+S P VTG GIPNS+SI
Sbjct: 905 SSGPGVTGRGIPNSISI 921
Score = 103 bits (258), Expect = 1e-20
Identities = 50/75 (66%), Positives = 56/75 (74%)
Frame = +3
Query: 3 QAWWDEIKSKSHYDKRNETW*PKLQTKKDLSGILATMVWNFG*QQGSMRP*NFGQCRFGG 182
QAWW EIK K H DK+NE W PKL TK+DLSGIL TM+W Q ++ NFGQ FGG
Sbjct: 727 QAWWREIKLKGHSDKKNEPWWPKLDTKEDLSGILTTMIWIASGQHAAI---NFGQYPFGG 783
Query: 183 YVPNRPTLMRKLIPR 227
YVPNRPTLMRKLIP+
Sbjct: 784 YVPNRPTLMRKLIPQ 798