BLASTX nr result

ID: Coptis24_contig00017580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017580
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950...   102   4e-20
emb|CAN68754.1| hypothetical protein VITISV_035531 [Vitis vinifera]   101   7e-20
ref|XP_002533587.1| hypothetical protein RCOM_0450210 [Ricinus c...    92   4e-17
ref|XP_002313439.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002298361.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_002283955.1| PREDICTED: uncharacterized protein At3g17950 [Vitis vinifera]
          Length = 212

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/110 (49%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
 Frame = -1

Query: 415 WFLSLCSKA----EDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADEYTAS----EPN 260
           WF SLCS+A    E+  + PSL HFL VERRA+N+YR N + + Y  DE   +    EPN
Sbjct: 103 WFFSLCSRASTDAENVKNPPSLGHFLAVERRAANEYRRNHSPIDYGPDELALAQPNAEPN 162

Query: 259 LLFINGHVAPPQSSPWLRSNDGERTNRSLANVGACGVPVLCSCMCGQPTN 110
            LF++G +APPQ S W  S+     NR L N    GVPVL SCMCGQ ++
Sbjct: 163 SLFMDGEIAPPQPSSWSGSDAEMGQNRGLVNGSGHGVPVLFSCMCGQSSH 212


>emb|CAN68754.1| hypothetical protein VITISV_035531 [Vitis vinifera]
          Length = 242

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/110 (49%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
 Frame = -1

Query: 415 WFLSLCSKA----EDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADEYTAS----EPN 260
           WF SLCS+A    E+  + PSL HFL VERRA+N+YR N + + Y  DE   +    EPN
Sbjct: 133 WFFSLCSRASTDAENVKNPPSLGHFLAVERRAANEYRRNHSPIDYGPDELALAQPNAEPN 192

Query: 259 LLFINGHVAPPQSSPWLRSNDGERTNRSLANVGACGVPVLCSCMCGQPTN 110
            LF++G +APPQ S W  S+     NR L N    GVPVL SCMCGQ ++
Sbjct: 193 SLFMDGAIAPPQPSSWSGSDAEMGQNRGLVNGSGHGVPVLFSCMCGQSSH 242


>ref|XP_002533587.1| hypothetical protein RCOM_0450210 [Ricinus communis]
           gi|223526531|gb|EEF28792.1| hypothetical protein
           RCOM_0450210 [Ricinus communis]
          Length = 180

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/117 (42%), Positives = 68/117 (58%), Gaps = 16/117 (13%)
 Frame = -1

Query: 415 WFLSLCSK----------AEDAISAPSLAHFLEVERRASNDYRSNQN--SMIYDADEY-- 278
           W  SLCS+          + +  + PSL HFL VER+A+N  R NQ+  +  Y  +E+  
Sbjct: 64  WLFSLCSRDTTDARSIVESSNINNPPSLGHFLAVERKAANGNRRNQSPTAATYGPEEFCF 123

Query: 277 --TASEPNLLFINGHVAPPQSSPWLRSNDGERTNRSLANVGACGVPVLCSCMCGQPT 113
             + +EPN LFINGHVAPP+ +PW   +D  R    L +    GVP+L SCMCGQP+
Sbjct: 124 AHSIAEPNSLFINGHVAPPRVTPWHEEDDQTRRTGGLEHGSGNGVPLLFSCMCGQPS 180


>ref|XP_002313439.1| predicted protein [Populus trichocarpa] gi|222849847|gb|EEE87394.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
 Frame = -1

Query: 415 WFLSLCSK----AEDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADE-----YTASEP 263
           W  SLCS+    AE   + PSL HFL VERRAS++ R N + +I+   +        +EP
Sbjct: 100 WIFSLCSRDTTDAEVVNNTPSLGHFLAVERRASSECRRNHDPIIHGPHDELELAQPVTEP 159

Query: 262 NLLFINGHVAPPQSSPWLRSNDGERTNRSLANVGACGVPVLCSCMCGQPT 113
           N LF+NGHVAPP+ S    +    R N  L + G   VPVL SCMCGQP+
Sbjct: 160 NSLFVNGHVAPPRPSQSCSAEAERRGNEELEHCGEYAVPVLFSCMCGQPS 209


>ref|XP_002298361.1| predicted protein [Populus trichocarpa] gi|222845619|gb|EEE83166.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
 Frame = -1

Query: 415 WFLSLCSK----AEDAISAPSLAHFLEVERRASNDYRSNQNSMIYDADE-----YTASEP 263
           W  SLCS+    A    + PSL HFL VERRA++++R N    I+   +        +EP
Sbjct: 103 WIFSLCSRDTTDARIVNNTPSLGHFLAVERRAADEFRRNHGPFIHGPHDELELAQPVTEP 162

Query: 262 NLLFINGHVAPPQSSPWLRSNDGERTNRSLANVGACGVPVLCSCMCGQPT 113
           N LF+NGHVAPP  +    +      N  L +    GVPVL SCMCGQP+
Sbjct: 163 NSLFVNGHVAPPTLNQSRGAGAERSGNEELEHCSGYGVPVLFSCMCGQPS 212


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