BLASTX nr result
ID: Coptis24_contig00017577
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017577 (2154 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28171.3| unnamed protein product [Vitis vinifera] 407 e-111 emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera] 389 e-105 ref|XP_002524463.1| nucleic acid binding protein, putative [Rici... 378 e-102 ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin... 315 2e-83 ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin... 315 3e-83 >emb|CBI28171.3| unnamed protein product [Vitis vinifera] Length = 573 Score = 407 bits (1045), Expect = e-111 Identities = 237/540 (43%), Positives = 321/540 (59%), Gaps = 6/540 (1%) Frame = -2 Query: 2141 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1962 M+DEL KRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDCWYWL+G+CLNP CAFRH Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60 Query: 1961 PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHGSNINSGQSSK 1782 PPL+G E + EP +L +S PV K+N PCYFY++ FCNKGE CSFLHG + ++G + Sbjct: 61 PPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPD-STGTETG 119 Query: 1781 SASLVANVHPLENKVVTSINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYNNGL 1602 + + +E VT+I Q K + Q V+ N Sbjct: 120 PTLIGRRPNSVETATVTAIE----------------------TQFQPKEDLQKLVFKNAF 157 Query: 1601 HKSPSPRIAVPGCDD-LTLKSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDPEER 1425 +S SP+I++ ++ ++S+ LLPAEG ++S L + +S+ Q D I+PEER Sbjct: 158 EQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQ----SRSLLSTDQSSEEQVDGPIEPEER 213 Query: 1424 WESSPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPLEFGDS 1245 WESSPGFDVLVD+ SENL YED+PEYLLA + E R L+ Q L YD+ED V YD L + ++ Sbjct: 214 WESSPGFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYD-LMYPEA 272 Query: 1244 GILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDTMGLPNRQNFPREVDLSVRNGVD 1065 ILY+H +Y+S+D L+N++ +D V+ +P SRE +LD + R+NFP E+ ++ R+G+D Sbjct: 273 EILYDHRIYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSGLD 332 Query: 1064 LRNQL-----XXXXXXXXXXXRGSLSHLKEAGQERPGRQHKRQTVHGRLTSEVASSRIGG 900 LR++L R S L +ER R Q + GR SEV + IG Sbjct: 333 LRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRSASEVRKNIIGM 392 Query: 899 CNESDHRSYGSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGTASQNARSP 720 +E++ S + +G R++ S+ SE+SR + + R Sbjct: 393 LSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHIS---SEDSRKPVSRE--RIS 447 Query: 719 KESITTFTGPKTLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREILKDKRRL 540 TTFTGPK+LA+IKEEKRK E G + T S +F+GPKPL EILKDKR+L Sbjct: 448 TREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRKL 507 >emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera] Length = 554 Score = 389 bits (1000), Expect = e-105 Identities = 242/568 (42%), Positives = 324/568 (57%), Gaps = 32/568 (5%) Frame = -2 Query: 2141 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1962 M+DEL KRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDCWYWL+G+CLNP CAFRH Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60 Query: 1961 P-----------------------PLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSS 1851 P PL+G E + EP +L +S PV K+N PCYFY++ Sbjct: 61 PVRVMLKRIQRDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNG 120 Query: 1850 FCNKGENCSFLHG--SNINSGQSSKSASLVANVHPLENKVVTSI-NGVTAAIELPHDESQ 1680 FCNKGE CSFLHG S+ + +S K+AS V ++ P EN + G T P+ Sbjct: 121 FCNKGERCSFLHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGRRPNSVET 180 Query: 1679 SLTKVVECIQSHSKVECQPSVYNNGLHKSPSPRIAVPGCDD-LTLKSEFLLPAEGIQSPV 1503 + +E Q K + Q V+ N +S SP+I++ ++ ++S+ LLPAEG Sbjct: 181 ATVTAIE-TQFQPKEDLQKLVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQ-- 237 Query: 1502 PANQSPLCAEHNSDGQFDDHIDPEERWESSPGFDVLVDDGSENLGYEDDPEYLLAQKRES 1323 ++S L + +S+ Q D I+PEERWESSPGFDVLVD+ SENL YED+PEYLLA + E Sbjct: 238 --SRSLLSTDQSSEEQVDGPIEPEERWESSPGFDVLVDNISENLVYEDEPEYLLALEGEG 295 Query: 1322 RVLHEQLLQYDYEDSVGYDPLEFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREM 1143 R L+ Q L YD+ED V YD L + ++ ILY+H +Y+S+D L+N++ R Sbjct: 296 RELNGQFLGYDFEDPVEYD-LMYPEAEILYDHRIYDSFDCLDNEH----------RREFW 344 Query: 1142 MLDTMGLPNRQNFPREVDLSVRNGVDLRNQL-----XXXXXXXXXXXRGSLSHLKEAGQE 978 +L G R+NFP E+ ++ R+G+DLR++L R S L +E Sbjct: 345 ILFCPG--KRKNFPVELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRE 402 Query: 977 RPGRQHKRQTVHGRLTSEVASSRIGGCNESDHRSYGSHHRGLSRQTESRYSKTXXXXXXX 798 R R Q + GR SEV + IG +E++ S + +G R++ S+ Sbjct: 403 RRRRHGMDQQLQGRSASEVRKNIIGMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGH 462 Query: 797 XXXXXXXXRFSENSRGGTASQNARSPKESITTFTGPKTLAEIKEEKRKTSEIRVSNGSTT 618 SE+SR + + R TTFTGPK+LA+IKEEKRK E G Sbjct: 463 SQRQHIS---SEDSRKPVSRE--RISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMG 517 Query: 617 NNGRTASQNFEGPKPLREILKDKRRLGS 534 + T S +F+GPKPL EILKDKR+LGS Sbjct: 518 YSSNTPSADFQGPKPLSEILKDKRKLGS 545 >ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis] gi|223536251|gb|EEF37903.1| nucleic acid binding protein, putative [Ricinus communis] Length = 530 Score = 378 bits (970), Expect = e-102 Identities = 228/545 (41%), Positives = 307/545 (56%), Gaps = 8/545 (1%) Frame = -2 Query: 2144 KMDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFR 1965 +M++++ KRNTDCVYFLASPLTCKKG ECEYRH+EIARLNPRDCWYWLAG+C NPTCAFR Sbjct: 2 QMEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFR 61 Query: 1964 HPPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHGSNINS--GQ 1791 HPPLE +E E S +S P K+NVPCYF+F+ FCNKG+ C F+HG NS G+ Sbjct: 62 HPPLEMHAEGPPELSS----SSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEANSFTGK 117 Query: 1790 SSKSASLVANVHPLENKVVTSINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYN 1611 S ++S + PL++K+ + V+A E+ + S++ K V+ ++ + Q Sbjct: 118 SGSTSSAIKENIPLDSKISGGNDTVSAPTEVNANPSETAAKAVKDLKLQPYEDFQFPAPE 177 Query: 1610 NGLHKSPSPRIAVPGCDD-LTLKSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDP 1434 + +SPSP+IAV ++ + L FLL ++S + + + DDH++P Sbjct: 178 KTVMRSPSPQIAVSQSEEAVILNPSFLLKVNSFTE----SRSLAYTTQSPEEEMDDHVEP 233 Query: 1433 EERWESSPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPLEF 1254 EERWESSPGFDVLVDD SENL YEDD EYLL E R + L YD+E+ V YD + Sbjct: 234 EERWESSPGFDVLVDDKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEYDH-AY 292 Query: 1253 GDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDTMGLPNRQNFPREVDLSVRN 1074 D+ Y G Y++ D +N +I D V SR + D++ R+ E+ ++ + Sbjct: 293 HDAEDDYGSGKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSINDQR 352 Query: 1073 GVDLRNQLXXXXXXXXXXXRGS-----LSHLKEAGQERPGRQHKRQTVHGRLTSEVASSR 909 VDLR++L S SHL GQ RPG Q HG+L EV S+ Sbjct: 353 IVDLRDRLGKDRAIHGHTVIRSSRRHYSSHLLGHGQGRPG---SNQRPHGKLVLEVKSTA 409 Query: 908 IGGCNESDHRSYGSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGTASQNA 729 I ++ + YG + G R + S S+ S AS+ Sbjct: 410 IEPHRKNGSQLYGGNDHGWLRHSRSNRSR----QRDKERRLARKQSLSSEVLRKPASKER 465 Query: 728 RSPKESITTFTGPKTLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREILKDK 549 +S + S T FTGPKTLA+IKEEK+K E G T N+ R A+ +FE PKPL EILKDK Sbjct: 466 KSSQAS-TQFTGPKTLAQIKEEKKKAEENGDYTGKTDNSSRMATADFESPKPLSEILKDK 524 Query: 548 RRLGS 534 RR S Sbjct: 525 RRPSS 529 >ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like [Glycine max] Length = 526 Score = 315 bits (808), Expect = 2e-83 Identities = 213/546 (39%), Positives = 292/546 (53%), Gaps = 12/546 (2%) Frame = -2 Query: 2141 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1962 MD++ KR TDCVYFLASPLTCKKGAECEYRH+EIARLNPRDCWYWL+G CLNPTCAFRH Sbjct: 1 MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60 Query: 1961 PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHG--SNINSGQS 1788 PPL+G + + E P Q S P K+ VPCYF+F+ FCNKG+ CSFLHG +I + + Sbjct: 61 PPLDGHTGAPVPSE--PTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDDSIFNIKP 118 Query: 1787 SKSASLVANVHPLENKVVT-SINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYN 1611 K+ + + LENK + + GVT+ P D S + K + ++ K + Q + Sbjct: 119 VKNENGSTDALNLENKAPSGNRTGVTST---PTDRSVAAPKNLSDLKHQPKEDHQLELPK 175 Query: 1610 NGLHKSPSPRIAVPGCDDLTL-KSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDP 1434 N + ++ + + +S+ +P +G VP LC +S+ Q + HI+P Sbjct: 176 NVKQQGDYLELSASEYKEAAVSRSDSSIPDDGFVHNVP----HLCTGQSSEEQVNSHIEP 231 Query: 1433 EERWES---SPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDP 1263 EE WES SPGFDVLV D ENLGYE+D EYL R+ + L++Q +Y++ D V YD Sbjct: 232 EEWWESSPHSPGFDVLVHDEVENLGYEEDSEYLPVVDRDEQELNDQYFRYEFIDPVEYDT 291 Query: 1262 LEFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDTMGLPNRQNFPREVDLS 1083 + ++ ILYE Y+ Y L+ D I + V + + LD + R E+ Sbjct: 292 I-CPEADILYEQETYDGYRCLDRDLIHVNGRTVHAYATDAFLDPILSRKRIRTSAEMAAY 350 Query: 1082 VRNGVDLRNQLXXXXXXXXXXXRGSL-----SHLKEAGQERPGRQHKRQTVHGRLTSEVA 918 +N +DLR+ L G L S L QER R Q RLTS++ Sbjct: 351 DKN-LDLRDHLRRRREVNGPPVTGFLRRQESSPLMVQNQERHLRHGIEQRPSRRLTSQLG 409 Query: 917 SSRIGGCNESDHRSYGSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGTAS 738 S I E + S G+ R L RQ++++ + S+ SR Sbjct: 410 YSAIDSTGEVETLSIGNKRR-LFRQSQAQQHRPRKNYIEKLPKRQFVS--SKISRKPVFK 466 Query: 737 QNARSPKESITTFTGPKTLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREIL 558 Q + S TF+GPKTLAEIKEEK K N + + ++ S +F+ PKPL EIL Sbjct: 467 QRGLIHESS--TFSGPKTLAEIKEEKMK------KNAEGSLHWKSTSTDFQDPKPLSEIL 518 Query: 557 KDKRRL 540 K KR + Sbjct: 519 KVKRTM 524 >ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like [Glycine max] Length = 524 Score = 315 bits (807), Expect = 3e-83 Identities = 211/544 (38%), Positives = 289/544 (53%), Gaps = 10/544 (1%) Frame = -2 Query: 2141 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1962 MD + KR TDCVYFLASPLTCKKGAECEYRH+EIARLNPRDCWYWL+G CLNPTCAFRH Sbjct: 1 MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60 Query: 1961 PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHG--SNINSGQS 1788 PPL+G + ++ E P Q S P K+ VPCYF+F+ CNKG+ CSFLHG +I + + Sbjct: 61 PPLDGHTGASVPSE--PTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDDSIFTVKP 118 Query: 1787 SKSASLVANVHPLENKVVTSINGVTAAIELPHDESQSLTKVVECIQSHSKVECQPSVYNN 1608 K+ + + LENK TS + P D+S + K + ++ K + Q + + Sbjct: 119 VKNDNGSTDALNLENK--TSSGNRIGLVSTPTDQSVAAPKNLSDLKLQPKEDHQLEIPKD 176 Query: 1607 GLHKSPSPRIAVPGCDDLTL-KSEFLLPAEGIQSPVPANQSPLCAEHNSDGQFDDHIDPE 1431 + ++ + + +S+ +P +G VP LC E +S+ Q + HI+PE Sbjct: 177 VKQQGYYLELSASEYKEAAVSRSDSSIPDDGFVHNVP----HLCTEQSSEEQVNSHIEPE 232 Query: 1430 ERWES---SPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPL 1260 ERWES SPGFDVLV D +NLGYE+D EY+ R+ + L +Q Y+++DSV YD + Sbjct: 233 ERWESSPHSPGFDVLVHDEVDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSVEYDTI 292 Query: 1259 EFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDTMGLPNRQNFPREVDLSV 1080 ++ ILYE Y+ Y L+ I + + R++ LD R E+ Sbjct: 293 -CPEADILYEQETYDGYRFLDRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEMAAYD 351 Query: 1079 RNGVDLRNQLXXXXXXXXXXXRGSL----SHLKEAGQERPGRQHKRQTVHGRLTSEVASS 912 +N +DLR+ L L S L QER R Q RLTS++ S Sbjct: 352 KN-LDLRDHLRRRREIKGPPVSNFLRRESSPLMIRKQERHQRHGIEQRPIRRLTSQLGYS 410 Query: 911 RIGGCNESDHRSYGSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGTASQN 732 I E S + HR L R ++++ K S+ SR Q Sbjct: 411 AIDSIGEVGTLSVANKHR-LFRHSQAQQHKPRKHYREKLPKRQFLS--SKISRKPAFKQ- 466 Query: 731 ARSPKESITTFTGPKTLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREILKD 552 R + F+GPKTLAEIKEEK K +E GS + ++ S +F+ PKPL EILKD Sbjct: 467 -RGFIHEFSAFSGPKTLAEIKEEKMKKAE-----GSL--HWKSTSTDFQDPKPLSEILKD 518 Query: 551 KRRL 540 KR + Sbjct: 519 KRTM 522