BLASTX nr result

ID: Coptis24_contig00017576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017576
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273896.1| PREDICTED: expansin-like B1 [Vitis vinifera]...   358   9e-97
ref|XP_002329557.1| hypothetical protein POPTRDRAFT_783792 [Popu...   345   1e-92
ref|XP_002531220.1| Major pollen allergen Ory s 1 precursor, put...   343   3e-92
ref|XP_002270175.2| PREDICTED: expansin-like B1 [Vitis vinifera]...   331   2e-88
ref|XP_002326673.1| hypothetical protein POPTRDRAFT_589918 [Popu...   330   4e-88

>ref|XP_002273896.1| PREDICTED: expansin-like B1 [Vitis vinifera]
           gi|296088951|emb|CBI38517.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  358 bits (920), Expect = 9e-97
 Identities = 161/238 (67%), Positives = 189/238 (79%), Gaps = 3/238 (1%)
 Frame = +2

Query: 164 LCIMVLLPALCSSQDTYTCSRATYYGSPDCLGTPTGACXXXXXXXXXXXXXXXAVSMLYR 343
           LC +VLLP LC  +DT+T SRATYYGSPDCLGTPTGAC               AVS LYR
Sbjct: 12  LCFIVLLPLLCKCEDTFTYSRATYYGSPDCLGTPTGACGFGEYGRSVNGGNVGAVSRLYR 71

Query: 344 NGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELLA 523
           NGTGCGACYQVRC  P LC ++G+K+VVTDHGEGD+TDFILSPRGF+ LARPNMAA+L A
Sbjct: 72  NGTGCGACYQVRCKVPNLCADNGMKVVVTDHGEGDYTDFILSPRGFSMLARPNMAADLFA 131

Query: 524 YGVVDIEYKRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQEW 703
           YGVV IEY+R+ CQYPG N+ FKVHEHSRFP+Y+AI+++YQAG  D+TAV++WQ DCQEW
Sbjct: 132 YGVVGIEYRRVPCQYPGSNIFFKVHEHSRFPDYLAIVMLYQAGLSDITAVDIWQEDCQEW 191

Query: 704 RGMRKAYGGVWDMPNPPVGALNLRFQVN---GEKWIQVSNAIPCPWKAGSAYDSTIQL 868
           +GMRK+YG VWDM NPP G + LRFQV+   G+KW+Q+ N IP  WKAG AYDS  QL
Sbjct: 192 KGMRKSYGAVWDMANPPKGPVGLRFQVSGRGGQKWVQLMNVIPSDWKAGVAYDSAFQL 249


>ref|XP_002329557.1| hypothetical protein POPTRDRAFT_783792 [Populus trichocarpa]
           gi|222870266|gb|EEF07397.1| hypothetical protein
           POPTRDRAFT_783792 [Populus trichocarpa]
          Length = 236

 Score =  345 bits (884), Expect = 1e-92
 Identities = 159/236 (67%), Positives = 185/236 (78%), Gaps = 4/236 (1%)
 Frame = +2

Query: 173 MVLLPALCSSQDTYTCSRATYYGSPDCLGTPTGACXXXXXXXXXXXXXXXAVSMLYRNGT 352
           M LLPA+  SQD YT SRATYYGSPDCLGTP+GAC                VS LY+NGT
Sbjct: 1   MALLPAISYSQD-YTFSRATYYGSPDCLGTPSGACGFGEYGRTVNDANVAGVSRLYKNGT 59

Query: 353 GCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELLAYGV 532
           GCG CYQVRC  P LCT+DGV +VVTD+GEGD TDFILSPR + ++A PNMA EL+AYGV
Sbjct: 60  GCGGCYQVRCKAPNLCTDDGVNVVVTDYGEGDKTDFILSPRAYARMAHPNMAVELIAYGV 119

Query: 533 VDIEYKRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQEWRGM 712
           VD+E++RI C+Y GYNLMFKVHEHSRFP+Y+AIIL+YQAGQ ++ AVELWQ DC+EWRGM
Sbjct: 120 VDVEFRRIPCRYSGYNLMFKVHEHSRFPDYLAIILLYQAGQNEILAVELWQEDCKEWRGM 179

Query: 713 RKAYGGVWDMPNPPVGALNLRFQVNGEK----WIQVSNAIPCPWKAGSAYDSTIQL 868
           R+AYG VWDMPNPP GA++LRFQV+G      W Q +N IP  WKAG AYDST+QL
Sbjct: 180 RRAYGAVWDMPNPPKGAISLRFQVSGSAGVTYWAQAANVIPSDWKAGIAYDSTVQL 235


>ref|XP_002531220.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus
           communis] gi|223529180|gb|EEF31156.1| Major pollen
           allergen Ory s 1 precursor, putative [Ricinus communis]
          Length = 247

 Score =  343 bits (881), Expect = 3e-92
 Identities = 158/239 (66%), Positives = 186/239 (77%), Gaps = 3/239 (1%)
 Frame = +2

Query: 161 VLCIMVLLPALCSSQDTYTCSRATYYGSPDCLGTPTGACXXXXXXXXXXXXXXXAVSMLY 340
           + C++VLLPA+  SQD +T SRATYYGSPDCLGTPTGAC                VS LY
Sbjct: 9   MFCLVVLLPAIAYSQD-FTGSRATYYGSPDCLGTPTGACGFGEYGRTVNDANVAGVSRLY 67

Query: 341 RNGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELL 520
           +NGTGCG CYQVRC  P++C++DGV +VVTD+GEGD TDFILS R + +LARPNMAAEL 
Sbjct: 68  KNGTGCGGCYQVRCKAPQICSDDGVNVVVTDYGEGDKTDFILSSRAYARLARPNMAAELF 127

Query: 521 AYGVVDIEYKRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQE 700
           AYGVVDIEY+RISC+Y GYN+MFKVHEHSRFPEY+AI+++YQ GQ D+ AV++WQ DC+E
Sbjct: 128 AYGVVDIEYRRISCRYAGYNVMFKVHEHSRFPEYLAIVVLYQGGQNDILAVQIWQEDCKE 187

Query: 701 WRGMRKAYGGVWDMPNPPVGALNLRFQVNGE---KWIQVSNAIPCPWKAGSAYDSTIQL 868
           W GMRKAYG VWDMPNPP G + LRFQV+G     W+Q  NAIP  WK G AYDS IQL
Sbjct: 188 WIGMRKAYGAVWDMPNPPKGYITLRFQVSGSAGLTWVQAKNAIPSEWKVGVAYDSAIQL 246


>ref|XP_002270175.2| PREDICTED: expansin-like B1 [Vitis vinifera]
           gi|296085708|emb|CBI29507.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  331 bits (848), Expect = 2e-88
 Identities = 150/238 (63%), Positives = 183/238 (76%), Gaps = 3/238 (1%)
 Frame = +2

Query: 164 LCIMVLLPALCSSQDTYTCSRATYYGSPDCLGTPTGACXXXXXXXXXXXXXXXAVSMLYR 343
           LC++VLLP LC  +D +T SRATYYG+PD LGTPTGAC               AVS LYR
Sbjct: 12  LCVIVLLPVLCKCEDAFTYSRATYYGTPDGLGTPTGACGFGEYGRSVNGGNVGAVSRLYR 71

Query: 344 NGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELLA 523
           +GTGCGACYQVRC  P LC + G+K+VVTDHG GD TDFILS RGF+ LARPN AA+L A
Sbjct: 72  DGTGCGACYQVRCKMPNLCADVGMKVVVTDHGGGDDTDFILSRRGFSMLARPNKAADLFA 131

Query: 524 YGVVDIEYKRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQEW 703
           YGVV IEY+R+ CQYPG N+ FKVHE+SRFP+Y+A++++YQAG  D+TAV++WQ D Q W
Sbjct: 132 YGVVGIEYRRVPCQYPGSNIFFKVHENSRFPDYLALVMLYQAGLSDITAVDIWQEDSQAW 191

Query: 704 RGMRKAYGGVWDMPNPPVGALNLRFQVN---GEKWIQVSNAIPCPWKAGSAYDSTIQL 868
           +GMRK++G VWDMPNPP G ++LRFQV+   G+KW+Q+ N IP  WKAG AYDS  QL
Sbjct: 192 KGMRKSHGAVWDMPNPPKGPVSLRFQVSGRRGQKWVQLMNVIPSDWKAGVAYDSNFQL 249


>ref|XP_002326673.1| hypothetical protein POPTRDRAFT_589918 [Populus trichocarpa]
           gi|222833995|gb|EEE72472.1| hypothetical protein
           POPTRDRAFT_589918 [Populus trichocarpa]
          Length = 251

 Score =  330 bits (845), Expect = 4e-88
 Identities = 155/250 (62%), Positives = 188/250 (75%), Gaps = 3/250 (1%)
 Frame = +2

Query: 128 YSSQMGYLSSLVLCIMVLLPALCSSQDTYTCSRATYYGSPDCLGTPTGACXXXXXXXXXX 307
           ++ + GY S L +  + LLPA+  SQD YTCSRATY+GSPDCLGTPTGAC          
Sbjct: 3   FALKYGY-SILCVVAVALLPAISHSQD-YTCSRATYFGSPDCLGTPTGACGFGGYGRTVN 60

Query: 308 XXXXXAVSMLYRNGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQ 487
                 VS L++NGTGCG CYQVRC    LC++DGV +VVTD+GEGD TDFILS R + +
Sbjct: 61  DANVAGVSRLFKNGTGCGGCYQVRCKASNLCSDDGVNVVVTDYGEGDKTDFILSTRAYAR 120

Query: 488 LARPNMAAELLAYGVVDIEYKRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVT 667
           +ARPNMA EL AYGVVD+E++RI C+Y GYNLMFKVHEHSRFPEY+AI+L+YQAGQ ++ 
Sbjct: 121 MARPNMALELFAYGVVDVEFRRIPCRYNGYNLMFKVHEHSRFPEYLAIVLLYQAGQNEIL 180

Query: 668 AVELWQADCQEWRGMRKAYGGVWDMPNPPVGALNLRFQVNGE---KWIQVSNAIPCPWKA 838
           AVEL Q DC+EWRGMR+AYG VWD+PNPP GA++L+ QV G     W+Q  N +P  WKA
Sbjct: 181 AVELRQEDCKEWRGMRRAYGAVWDIPNPPKGAISLKLQVCGSAGVTWVQADNVLPSDWKA 240

Query: 839 GSAYDSTIQL 868
           G AYDS IQL
Sbjct: 241 GVAYDSAIQL 250


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