BLASTX nr result
ID: Coptis24_contig00017561
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017561 (626 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37733.3| unnamed protein product [Vitis vinifera] 221 8e-71 ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin... 221 8e-71 ref|XP_002313575.1| glutamate-gated kainate-type ion channel rec... 218 1e-69 ref|XP_002306988.1| glutamate-gated kainate-type ion channel rec... 217 9e-64 emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera] 190 2e-61 >emb|CBI37733.3| unnamed protein product [Vitis vinifera] Length = 1147 Score = 221 bits (564), Expect(2) = 8e-71 Identities = 104/157 (66%), Positives = 133/157 (84%) Frame = +1 Query: 1 NELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIAIYTDDDH 180 NEL VPLLSFTA DP LS LQ+P+F+QT+PSD FQMTAIAD+V+++ WREVIA+Y+DDD Sbjct: 342 NELHVPLLSFTALDPALSPLQFPYFIQTAPSDLFQMTAIADMVSYFEWREVIAVYSDDDQ 401 Query: 181 GRNGISALGDKLVERRCRISYKAVLPPDLGATQAEITDALVKVALMESRIIVVHTYSNSG 360 RNGI+ LGDKL ER+C+ISYKA LPPD AT+ ++ + LVKV +MESR+IV+HT S +G Sbjct: 402 SRNGITTLGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTG 461 Query: 361 LMVFDMAKHLRMIDAGYVWIATTWLSTVLDSKSPFSK 471 L+VFD+AK+L M+++GYVWIA+TWLST+LDS SK Sbjct: 462 LLVFDVAKYLGMMESGYVWIASTWLSTILDSTPLSSK 498 Score = 71.6 bits (174), Expect(2) = 8e-71 Identities = 34/55 (61%), Positives = 37/55 (67%) Frame = +2 Query: 461 LSPNVRRSLQGVLTLRPHTPPSEXXXXXXXXXXQLSNGTIGLNPYGLYTYDTVWI 625 LS S+QGVLTLRPHTP S+ LSNGTIGLNPYGLY YDTVW+ Sbjct: 495 LSSKTADSIQGVLTLRPHTPDSKKKREFSSRWNHLSNGTIGLNPYGLYAYDTVWM 549 >ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera] Length = 917 Score = 221 bits (564), Expect(2) = 8e-71 Identities = 104/157 (66%), Positives = 133/157 (84%) Frame = +1 Query: 1 NELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIAIYTDDDH 180 NEL VPLLSFTA DP LS LQ+P+F+QT+PSD FQMTAIAD+V+++ WREVIA+Y+DDD Sbjct: 112 NELHVPLLSFTALDPALSPLQFPYFIQTAPSDLFQMTAIADMVSYFEWREVIAVYSDDDQ 171 Query: 181 GRNGISALGDKLVERRCRISYKAVLPPDLGATQAEITDALVKVALMESRIIVVHTYSNSG 360 RNGI+ LGDKL ER+C+ISYKA LPPD AT+ ++ + LVKV +MESR+IV+HT S +G Sbjct: 172 SRNGITTLGDKLAERQCKISYKAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTG 231 Query: 361 LMVFDMAKHLRMIDAGYVWIATTWLSTVLDSKSPFSK 471 L+VFD+AK+L M+++GYVWIA+TWLST+LDS SK Sbjct: 232 LLVFDVAKYLGMMESGYVWIASTWLSTILDSTPLSSK 268 Score = 71.6 bits (174), Expect(2) = 8e-71 Identities = 34/55 (61%), Positives = 37/55 (67%) Frame = +2 Query: 461 LSPNVRRSLQGVLTLRPHTPPSEXXXXXXXXXXQLSNGTIGLNPYGLYTYDTVWI 625 LS S+QGVLTLRPHTP S+ LSNGTIGLNPYGLY YDTVW+ Sbjct: 265 LSSKTADSIQGVLTLRPHTPDSKKKREFSSRWNHLSNGTIGLNPYGLYAYDTVWM 319 >ref|XP_002313575.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222849983|gb|EEE87530.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 900 Score = 218 bits (554), Expect(2) = 1e-69 Identities = 101/154 (65%), Positives = 129/154 (83%) Frame = +1 Query: 1 NELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIAIYTDDDH 180 NELQVP LSFTA DPTLS LQ+P+F+QT+P+D FQMTAIADIV++YGW EV A++ DDD Sbjct: 113 NELQVPFLSFTALDPTLSPLQFPYFIQTAPNDLFQMTAIADIVSYYGWSEVTAVFNDDDQ 172 Query: 181 GRNGISALGDKLVERRCRISYKAVLPPDLGATQAEITDALVKVALMESRIIVVHTYSNSG 360 RNGI+ LGDKL ERRC+ISYKA LPP+ AT+++I D L K+ MESR+IV++T+S +G Sbjct: 173 NRNGITVLGDKLAERRCKISYKAALPPEPKATRSDIQDELAKILGMESRVIVLNTFSKTG 232 Query: 361 LMVFDMAKHLRMIDAGYVWIATTWLSTVLDSKSP 462 L+VFD+AK L M++ G+VWI T+WLSTV+DS SP Sbjct: 233 LLVFDVAKALGMMENGFVWIVTSWLSTVIDSASP 266 Score = 71.2 bits (173), Expect(2) = 1e-69 Identities = 32/53 (60%), Positives = 36/53 (67%) Frame = +2 Query: 467 PNVRRSLQGVLTLRPHTPPSEXXXXXXXXXXQLSNGTIGLNPYGLYTYDTVWI 625 P S+QGVL LRPHTP S+ QLSNG+IGLNPYGLY YDTVW+ Sbjct: 268 PTTANSIQGVLALRPHTPDSKRKGDFMSRWNQLSNGSIGLNPYGLYAYDTVWL 320 >ref|XP_002306988.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222856437|gb|EEE93984.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 897 Score = 217 bits (553), Expect(2) = 9e-64 Identities = 98/154 (63%), Positives = 126/154 (81%) Frame = +1 Query: 1 NELQVPLLSFTATDPTLSALQYPFFLQTSPSDAFQMTAIADIVTHYGWREVIAIYTDDDH 180 NELQVPLLSF ATDPTL++LQ+PFF++T+ SD +QM AI+++V HYGW++V AI+ D+D+ Sbjct: 108 NELQVPLLSFAATDPTLNSLQFPFFVRTTQSDFYQMAAISEVVDHYGWKQVTAIFIDNDY 167 Query: 181 GRNGISALGDKLVERRCRISYKAVLPPDLGATQAEITDALVKVALMESRIIVVHTYSNSG 360 GRNG+SALGD+L ERRCRISYK +PPD G + +I D LVKVALMESR+++VH Y + G Sbjct: 168 GRNGVSALGDRLAERRCRISYKVGIPPDSGVNRGDIMDILVKVALMESRVVIVHVYPDMG 227 Query: 361 LMVFDMAKHLRMIDAGYVWIATTWLSTVLDSKSP 462 +F MA HL M+ G+VWIAT WLS+VLDS SP Sbjct: 228 FKIFSMANHLEMMGNGWVWIATDWLSSVLDSASP 261 Score = 52.4 bits (124), Expect(2) = 9e-64 Identities = 23/48 (47%), Positives = 31/48 (64%) Frame = +2 Query: 482 SLQGVLTLRPHTPPSEXXXXXXXXXXQLSNGTIGLNPYGLYTYDTVWI 625 S+QGVL LR HTP S+ +L+ G +GL+ YGLY YD+VW+ Sbjct: 269 SVQGVLVLRQHTPDSDRNRAFSSRWHKLTGGYLGLHSYGLYAYDSVWL 316 >emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera] Length = 959 Score = 190 bits (483), Expect(2) = 2e-61 Identities = 87/136 (63%), Positives = 116/136 (85%) Frame = +1 Query: 64 YPFFLQTSPSDAFQMTAIADIVTHYGWREVIAIYTDDDHGRNGISALGDKLVERRCRISY 243 +P+F+QT+PSD FQMTAIAD+V+++ WREVIA+Y+DDD RNGI+ LGDKL ER+C+ISY Sbjct: 175 FPYFIQTAPSDLFQMTAIADMVSYFEWREVIAVYSDDDQSRNGITTLGDKLAERQCKISY 234 Query: 244 KAVLPPDLGATQAEITDALVKVALMESRIIVVHTYSNSGLMVFDMAKHLRMIDAGYVWIA 423 KA LPPD AT+ ++ + LVKV +MESR+IV+HT S +GL+VFD+AK+L M+++GYVWIA Sbjct: 235 KAALPPDPKATRDQVFNELVKVRMMESRVIVLHTLSKTGLLVFDVAKYLGMMESGYVWIA 294 Query: 424 TTWLSTVLDSKSPFSK 471 +TWLST+LDS SK Sbjct: 295 STWLSTILDSTPLSSK 310 Score = 71.6 bits (174), Expect(2) = 2e-61 Identities = 34/55 (61%), Positives = 37/55 (67%) Frame = +2 Query: 461 LSPNVRRSLQGVLTLRPHTPPSEXXXXXXXXXXQLSNGTIGLNPYGLYTYDTVWI 625 LS S+QGVLTLRPHTP S+ LSNGTIGLNPYGLY YDTVW+ Sbjct: 307 LSSKTADSIQGVLTLRPHTPDSKKKREFSSRWNHLSNGTIGLNPYGLYAYDTVWM 361