BLASTX nr result

ID: Coptis24_contig00017554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017554
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75643.1| unknown [Picea sitchensis]                             140   1e-31
ref|XP_003580941.1| PREDICTED: putative amidase C869.01-like [Br...   137   9e-31
ref|XP_002305492.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|ABD65012.1| amidase, putative [Brassica oleracea]                  133   1e-29
gb|EEC76850.1| hypothetical protein OsI_15015 [Oryza sativa Indi...   133   2e-29

>gb|ADE75643.1| unknown [Picea sitchensis]
          Length = 529

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/110 (63%), Positives = 81/110 (73%)
 Frame = +3

Query: 6   TNAPGGWSARGGTVKNPYVLTTEPXXXXXXXXXXXXXNLVTVSLGTETNGSIIEPCSVSC 185
           +NAP GWSARG   K+PYVLT +P             N+  V+LGTET+GSI+ P   + 
Sbjct: 177 SNAPSGWSARGRQAKDPYVLTADPCGSSTGSAVGVAANMAAVTLGTETDGSILCPSGANA 236

Query: 186 VVGIKPTLGLTSRSGVIPISLRQDTVGPIGRTVSDAVYLLDVIVGYDPRD 335
           VVGIKPT+GLTSR+GVIPIS  QDTVGPI RTV+DAVYLLD IVGYDPRD
Sbjct: 237 VVGIKPTVGLTSRAGVIPISHHQDTVGPICRTVTDAVYLLDEIVGYDPRD 286


>ref|XP_003580941.1| PREDICTED: putative amidase C869.01-like [Brachypodium distachyon]
          Length = 519

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/106 (63%), Positives = 81/106 (76%)
 Frame = +3

Query: 18  GGWSARGGTVKNPYVLTTEPXXXXXXXXXXXXXNLVTVSLGTETNGSIIEPCSVSCVVGI 197
           GGWSARGG  KNPYVL+  P             N+  V+LGTET+GSI+ P S++ VVGI
Sbjct: 173 GGWSARGGQGKNPYVLSASPCGSSTGSAIAAAANMAAVALGTETDGSILCPASLNSVVGI 232

Query: 198 KPTLGLTSRSGVIPISLRQDTVGPIGRTVSDAVYLLDVIVGYDPRD 335
           KPT+GLTSR+GV+PI+ RQDTVGPIGRTV+DAV++LD IVGYD RD
Sbjct: 233 KPTVGLTSRAGVVPITPRQDTVGPIGRTVADAVHVLDTIVGYDDRD 278


>ref|XP_002305492.1| predicted protein [Populus trichocarpa] gi|222848456|gb|EEE86003.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/107 (63%), Positives = 79/107 (73%)
 Frame = +3

Query: 15  PGGWSARGGTVKNPYVLTTEPXXXXXXXXXXXXXNLVTVSLGTETNGSIIEPCSVSCVVG 194
           P GW ARGG  KNPYV + +P             N+V VSLGTET+GSII P   + VVG
Sbjct: 172 PDGWCARGGLAKNPYVESADPCGSSSGSAISVAANMVAVSLGTETDGSIICPADHNSVVG 231

Query: 195 IKPTLGLTSRSGVIPISLRQDTVGPIGRTVSDAVYLLDVIVGYDPRD 335
           +KPT+GLTSR+GVIPIS RQDT+GPI RTVSDAVY+LD IVG+DPRD
Sbjct: 232 LKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVYVLDAIVGFDPRD 278


>gb|ABD65012.1| amidase, putative [Brassica oleracea]
          Length = 522

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/110 (60%), Positives = 82/110 (74%)
 Frame = +3

Query: 6   TNAPGGWSARGGTVKNPYVLTTEPXXXXXXXXXXXXXNLVTVSLGTETNGSIIEPCSVSC 185
           ++ P GWSARG   KNPYVL+ +P             NLV VSLGTET+GSI+ P S + 
Sbjct: 191 SSIPNGWSARGLQGKNPYVLSADPLGSSSGSAISVAANLVAVSLGTETDGSILAPSSQNS 250

Query: 186 VVGIKPTLGLTSRSGVIPISLRQDTVGPIGRTVSDAVYLLDVIVGYDPRD 335
           VVGIKP++GLTSR+GV+PISLRQD+VGPI R VSD+V++LD IVGYDP D
Sbjct: 251 VVGIKPSVGLTSRAGVVPISLRQDSVGPICRRVSDSVHVLDAIVGYDPLD 300


>gb|EEC76850.1| hypothetical protein OsI_15015 [Oryza sativa Indica Group]
          Length = 521

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/106 (61%), Positives = 80/106 (75%)
 Frame = +3

Query: 18  GGWSARGGTVKNPYVLTTEPXXXXXXXXXXXXXNLVTVSLGTETNGSIIEPCSVSCVVGI 197
           GGWSARGG  +NPYVL+  P             N+  V+LGTET+GSI+ P S++ VVGI
Sbjct: 172 GGWSARGGQSRNPYVLSAAPCGSSTGSAIAAAANMAAVTLGTETDGSILCPSSLNSVVGI 231

Query: 198 KPTLGLTSRSGVIPISLRQDTVGPIGRTVSDAVYLLDVIVGYDPRD 335
           KPT+GLTSR+GV+PIS RQDT+GPI RTV+DAV++LD IVGYD RD
Sbjct: 232 KPTVGLTSRAGVVPISPRQDTIGPICRTVTDAVHVLDAIVGYDSRD 277


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