BLASTX nr result

ID: Coptis24_contig00017547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017547
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511494.1| ATP binding protein, putative [Ricinus commu...   392   e-107
ref|XP_003551720.1| PREDICTED: uncharacterized protein LOC100777...   388   e-105
ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloproteas...   387   e-105
ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252...   386   e-105
ref|XP_003622403.1| AAA-ATPase 1-like protein [Medicago truncatu...   383   e-104

>ref|XP_002511494.1| ATP binding protein, putative [Ricinus communis]
           gi|223550609|gb|EEF52096.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 505

 Score =  392 bits (1008), Expect = e-107
 Identities = 193/310 (62%), Positives = 244/310 (78%), Gaps = 3/310 (0%)
 Frame = +1

Query: 43  MGNVWGTNGIGSSIANIMFFHAMFRQYIPQRLLDLIDKYVQKWLTFVNSDIQITISEYTG 222
           M  +W T  +GS+IA+ MF  A+FRQY P  +    +KY Q  +TF    I+I+I EYTG
Sbjct: 1   MTEMWAT--MGSTIASFMFIWAIFRQYCPYEVRRYFEKYTQGIMTFFYPYIKISIHEYTG 58

Query: 223 DRFKRSEAYTAIQAYLSTNSSKQAKRLKADVGENSKNLVLSIDDYEEVTDEYQGAQFVWT 402
           DR KRSEAY A++AYLS NSSK AKRLKA++G++S NLVLS+D+YE VTDE++G +  W 
Sbjct: 59  DRLKRSEAYAAVEAYLSLNSSKSAKRLKAEMGKDSSNLVLSMDEYERVTDEFRGVKVWWV 118

Query: 403 SAESHS---NQSRTDGKRYYMLKFHKKYRGLVTDTYLSHVMEVGKAIGLKNNQRKLYTNN 573
           S++  S   +      +RYY L FHKK R L+T+ YL HV+  GK I ++N QRKLYTN+
Sbjct: 119 SSKVVSPTQSMYPQQERRYYKLTFHKKDRELITEAYLQHVVREGKEIRVRNRQRKLYTNS 178

Query: 574 PSIDWYSYKKSVWSHVVFDHPSTFQTLALDAEKKKDIIDDLTAFTKAKGYYRKIGKAWKR 753
           P   W SYK+++WSH+VF+HP+TF+T+AL+ EKK++II+DL  F+K+K +Y +IGKAWKR
Sbjct: 179 PGYKWPSYKQTMWSHIVFEHPATFETMALEPEKKQEIIEDLLTFSKSKDFYARIGKAWKR 238

Query: 754 GYLLYGPPGTGKSTMIAAIANFLDYDIYDLELTAVKSNTELRKLLIETTNKSIIVIEDID 933
           GYLLYGPPGTGKSTMIAA+AN L+YD+YDLELTAVK NTELRKLLIETT+KSIIVIEDID
Sbjct: 239 GYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDID 298

Query: 934 CSLDLTGQRK 963
           CSLDLTGQRK
Sbjct: 299 CSLDLTGQRK 308


>ref|XP_003551720.1| PREDICTED: uncharacterized protein LOC100777731 [Glycine max]
          Length = 571

 Score =  388 bits (996), Expect = e-105
 Identities = 193/315 (61%), Positives = 243/315 (77%), Gaps = 9/315 (2%)
 Frame = +1

Query: 43  MGNVWGTNGIGSSIANIMFFHAMFRQYIPQRLLDLIDKYVQKWLTFVNSDIQITISEYTG 222
           MG +W    +GS +A IMF +AM  ++ P  L D +  + QK +  +   +QIT  E++G
Sbjct: 1   MGELW--TQMGSLMATIMFVYAMVERFFPAALRDTLQIHTQKVVNLLYPYVQITFPEFSG 58

Query: 223 DRFKRSEAYTAIQAYLSTNSSKQAKRLKADVGENSKN-LVLSIDDYEEVTDEYQGAQFVW 399
           +R KRSEAYTAIQ YLS NSS+ AKRLKA+V ++S+N LVLS+DD EEVTDE+QG +  W
Sbjct: 59  ERLKRSEAYTAIQTYLSENSSQLAKRLKAEVVKDSQNPLVLSMDDDEEVTDEFQGVKLWW 118

Query: 400 TSAESHSNQ--------SRTDGKRYYMLKFHKKYRGLVTDTYLSHVMEVGKAIGLKNNQR 555
            ++++ SN         S  DGKRY+ L FHKK+R L+T +Y+ HV+E GK I L+N QR
Sbjct: 119 AASKTASNPHAYSFSYYSPPDGKRYFKLTFHKKHRDLITISYIKHVLEEGKEIALRNRQR 178

Query: 556 KLYTNNPSIDWYSYKKSVWSHVVFDHPSTFQTLALDAEKKKDIIDDLTAFTKAKGYYRKI 735
           KLYTNNPS  WY YK+S WSH+VF+HP+TF+TLA+D  KK++II+DL  F   K YY KI
Sbjct: 179 KLYTNNPSSGWYGYKQSKWSHIVFEHPATFETLAMDHRKKEEIINDLVKFRNGKDYYAKI 238

Query: 736 GKAWKRGYLLYGPPGTGKSTMIAAIANFLDYDIYDLELTAVKSNTELRKLLIETTNKSII 915
           GKAWKRGYLLYGPPGTGKSTMIAA+ANF++YD+YDLELTAVK NTELRKLLIET++K+II
Sbjct: 239 GKAWKRGYLLYGPPGTGKSTMIAAMANFMNYDVYDLELTAVKDNTELRKLLIETSSKAII 298

Query: 916 VIEDIDCSLDLTGQR 960
           V+EDIDCSLDLTGQR
Sbjct: 299 VVEDIDCSLDLTGQR 313


>ref|XP_002275823.2| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
           vinifera]
          Length = 528

 Score =  387 bits (995), Expect = e-105
 Identities = 192/306 (62%), Positives = 242/306 (79%), Gaps = 8/306 (2%)
 Frame = +1

Query: 70  IGSSIANIMFFHAMFRQYIPQRLLDLIDKYVQKWLTFVNSDIQITISEYTGDRF--KRSE 243
           +GS  A  MF  AMFRQY P +L   I+KY    ++FV   IQIT+ E+T + F  KRSE
Sbjct: 10  LGSLAAGAMFLWAMFRQYFPYQLRPYIEKYSHNLVSFVYPYIQITVQEFTENSFRRKRSE 69

Query: 244 AYTAIQAYLSTNSSKQAKRLKADVGENSKNLVLSIDDYEEVTDEYQGAQFVWTS------ 405
           AY AI+ YLS NSS +AKRLKAD+ ++S+++VLS+DD+EEVTDE++G +  W S      
Sbjct: 70  AYAAIENYLSANSSTRAKRLKADIVKDSQSVVLSMDDHEEVTDEFKGVKLWWASNKNPPP 129

Query: 406 AESHSNQSRTDGKRYYMLKFHKKYRGLVTDTYLSHVMEVGKAIGLKNNQRKLYTNNPSID 585
            ++ S     DGKRYY L FHK+YR L+  +YL+HV++ GKAI ++N QRKLYTNNPS +
Sbjct: 130 MQTISFYPAADGKRYYKLTFHKQYRDLIVGSYLNHVIKEGKAIAVRNRQRKLYTNNPSQN 189

Query: 586 WYSYKKSVWSHVVFDHPSTFQTLALDAEKKKDIIDDLTAFTKAKGYYRKIGKAWKRGYLL 765
           WY YKKSVWSHV F+HP+TF+TLA++++KK++I++DLT F   K YY KIGKAWKRGYLL
Sbjct: 190 WYGYKKSVWSHVTFEHPATFETLAMESKKKEEIVNDLTIFRTRKEYYSKIGKAWKRGYLL 249

Query: 766 YGPPGTGKSTMIAAIANFLDYDIYDLELTAVKSNTELRKLLIETTNKSIIVIEDIDCSLD 945
           +GPPGTGKS+MIAA+AN L+YDIYDLELT+VK NTELRKLLIETT+KSI+VIEDIDCSLD
Sbjct: 250 HGPPGTGKSSMIAAMANLLNYDIYDLELTSVKDNTELRKLLIETTSKSILVIEDIDCSLD 309

Query: 946 LTGQRK 963
           LTGQRK
Sbjct: 310 LTGQRK 315


>ref|XP_002275941.2| PREDICTED: uncharacterized protein LOC100252565 [Vitis vinifera]
          Length = 520

 Score =  386 bits (992), Expect = e-105
 Identities = 194/319 (60%), Positives = 242/319 (75%), Gaps = 9/319 (2%)
 Frame = +1

Query: 34  MARMGNVWGTNGIGSSIANIMFFHAMFRQYIPQRLLDLIDKYVQKWLTFVNSDIQITISE 213
           M  MG +W   G  S +A  MF   MF+QY P +    I+KY QK ++FV   IQIT  E
Sbjct: 1   MMMMGEMWAKPG--SLVAGAMFLWVMFQQYTPHQFRSYIEKYSQKLVSFVYPYIQITFQE 58

Query: 214 YTGDRFKRSEAYTAIQAYLSTNSSKQAKRLKADVGENSKNLVLSIDDYEEVTDEYQGAQF 393
           ++ DRFKRSEAY AI+ YLS N+S +AKRLKADV ++S++LVLS+DD EEVTDE++G + 
Sbjct: 59  FSEDRFKRSEAYVAIENYLSVNASTRAKRLKADVIKDSQSLVLSMDDREEVTDEFKGVKL 118

Query: 394 VWTSAESHSNQSRT---------DGKRYYMLKFHKKYRGLVTDTYLSHVMEVGKAIGLKN 546
            W S   H N  +T         D KR+Y L FHK +R +   +YL+HVM+ GKAI ++N
Sbjct: 119 WWAS---HKNPPKTQTFSFYPAADEKRFYKLTFHKNHREMFVGSYLNHVMKEGKAIEVRN 175

Query: 547 NQRKLYTNNPSIDWYSYKKSVWSHVVFDHPSTFQTLALDAEKKKDIIDDLTAFTKAKGYY 726
            QRKLYTNNPS  W+ Y++++WSHV F+HP+ F+TLA++ +KK++I++DLT F++ K YY
Sbjct: 176 RQRKLYTNNPSDKWHGYRRTLWSHVAFEHPARFETLAMEPKKKEEIVNDLTIFSRRKEYY 235

Query: 727 RKIGKAWKRGYLLYGPPGTGKSTMIAAIANFLDYDIYDLELTAVKSNTELRKLLIETTNK 906
            KIGKAWKRGYLLYGPPGTGKSTMIAA+AN LDYDIYDLELT+VKSNTELR LLIET NK
Sbjct: 236 SKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLDYDIYDLELTSVKSNTELRMLLIETRNK 295

Query: 907 SIIVIEDIDCSLDLTGQRK 963
           SIIVIEDIDCSLDLTGQRK
Sbjct: 296 SIIVIEDIDCSLDLTGQRK 314


>ref|XP_003622403.1| AAA-ATPase 1-like protein [Medicago truncatula]
           gi|355497418|gb|AES78621.1| AAA-ATPase 1-like protein
           [Medicago truncatula]
          Length = 520

 Score =  383 bits (984), Expect = e-104
 Identities = 186/314 (59%), Positives = 245/314 (78%), Gaps = 6/314 (1%)
 Frame = +1

Query: 40  RMGNVWGTNGIGSSIANIMFFHAMFRQYIPQRLLDLIDKYVQKWLTFVNSDIQITISEYT 219
           +M  +W T  +GS++A+ MF  A+ RQY P +LL   +KY  + + +    I+I+  E+ 
Sbjct: 5   KMTEMWTT--MGSTLASFMFIWAIIRQYCPYQLLRFFEKYSHRIMDYFYPYIRISFHEFL 62

Query: 220 GDRFKRSEAYTAIQAYLSTNSSKQAKRLKADVGENSKNLVLSIDDYEEVTDEYQGAQFVW 399
           GDR KRS+AY A++AYLS N+SK AKRLKA++G++S NLVL++D+YE VTD+Y+G +  W
Sbjct: 63  GDRLKRSDAYGAVEAYLSANTSKSAKRLKAEIGKDSTNLVLTMDEYERVTDDYKGVKVYW 122

Query: 400 TSAESHSNQSRT------DGKRYYMLKFHKKYRGLVTDTYLSHVMEVGKAIGLKNNQRKL 561
             ++  S QSR+        KR+Y L FHKKYR  +T +YL HVM+ GK I L+N QRKL
Sbjct: 123 VCSKVMS-QSRSMPYYQEQEKRFYKLTFHKKYRDTITGSYLDHVMKEGKEIRLRNRQRKL 181

Query: 562 YTNNPSIDWYSYKKSVWSHVVFDHPSTFQTLALDAEKKKDIIDDLTAFTKAKGYYRKIGK 741
           YTN+P   W SYK+++WSH+VF+HP+TF+T+A++ +KKK+II+DL  F+K+K +Y +IGK
Sbjct: 182 YTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPQKKKEIIEDLVTFSKSKDFYARIGK 241

Query: 742 AWKRGYLLYGPPGTGKSTMIAAIANFLDYDIYDLELTAVKSNTELRKLLIETTNKSIIVI 921
           AWKRGYLL+GPPGTGKSTMIAA+AN L YD+YDLELTAVK NTELRKLLIETT+KSIIVI
Sbjct: 242 AWKRGYLLFGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVI 301

Query: 922 EDIDCSLDLTGQRK 963
           EDIDCSLDLTGQRK
Sbjct: 302 EDIDCSLDLTGQRK 315


Top