BLASTX nr result

ID: Coptis24_contig00017545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017545
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]      81   1e-13
ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478...    68   7e-10
ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788...    67   2e-09
ref|XP_002510180.1| conserved hypothetical protein [Ricinus comm...    66   3e-09

>ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]
          Length = 305

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 7/80 (8%)
 Frame = +3

Query: 3   SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSREDGVRNVSK-GEGEKTKLIQEVANANA 179
           SV++TALPLPGP LGNSSFPQEA+FEIT L S E    +V +  EGE+TKLI E +NA A
Sbjct: 24  SVIRTALPLPGPPLGNSSFPQEAYFEITILFSGEGDPESVGRVKEGERTKLIHENSNAKA 83

Query: 180 QS------DELKIAIKDEGR 221
            S      +E+K+  KD+G+
Sbjct: 84  NSESIIHLEEMKLGSKDDGK 103


>ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|222835263|gb|EEE73698.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = +3

Query: 3   SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSREDGVRNVSKG-EGEKTKLIQEVANANA 179
           SV++TALPLPGP LGNSSFPQEA+FEIT L S  D   +  K  EGE+ KLIQE  NA A
Sbjct: 176 SVIRTALPLPGPPLGNSSFPQEAYFEITVLYSHGDDQESAGKAKEGERAKLIQEKPNAKA 235

Query: 180 QSDEL 194
            S+ L
Sbjct: 236 NSESL 240


>ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478198|gb|AES59401.1|
           Protein ssh4 [Medicago truncatula]
          Length = 446

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSREDG-VRNVSKGEGEKTKLIQEVANANA 179
           SV++T+LPLPGPFLGN +FPQEA+FEIT L S  +G    V + EGEKTKL+ E  ++N 
Sbjct: 163 SVIRTSLPLPGPFLGNHAFPQEAYFEITILYSSWNGDYELVGRREGEKTKLLIE-DSSND 221

Query: 180 QSDELKI-AIKDEGRS 224
           + D   +  +K EG+S
Sbjct: 222 EGDLKSVEEMKVEGKS 237


>ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788520 [Glycine max]
          Length = 465

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
 Frame = +3

Query: 3   SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSR-EDGVRNVSKGEGEKTKLIQEVANANA 179
           SV++T LPLPGP LGN +FPQEA+FEIT L S  +D    V+K EGEKTKL+ E  +  A
Sbjct: 183 SVIRTVLPLPGPPLGNYAFPQEAYFEITILFSHIDDHELVVAKREGEKTKLLIEDGSNGA 242

Query: 180 QS----DELKIAIKDEG 218
                 +E+K+  K+ G
Sbjct: 243 SELDTVEEMKLGQKEGG 259


>ref|XP_002510180.1| conserved hypothetical protein [Ricinus communis]
           gi|223550881|gb|EEF52367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 480

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 19/92 (20%)
 Frame = +3

Query: 3   SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSR---EDGVRNVSKGEGEKTKLIQEVANA 173
           SV++T LPLPGP LGNS+FPQEA+FEIT L  +    D        EGEKTKLIQE +N 
Sbjct: 179 SVIRTGLPLPGPPLGNSAFPQEAYFEITVLYCQGHYHDHSVVAKIREGEKTKLIQENSNH 238

Query: 174 NAQS---------------DELKIAI-KDEGR 221
              S               +ELK+A  KDEG+
Sbjct: 239 RMNSESLAHVTSSHRFNKFEELKLATGKDEGK 270


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