BLASTX nr result
ID: Coptis24_contig00017545
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017545 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera] 81 1e-13 ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478... 68 7e-10 ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788... 67 2e-09 ref|XP_002510180.1| conserved hypothetical protein [Ricinus comm... 66 3e-09 >ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera] Length = 305 Score = 80.9 bits (198), Expect = 1e-13 Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 7/80 (8%) Frame = +3 Query: 3 SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSREDGVRNVSK-GEGEKTKLIQEVANANA 179 SV++TALPLPGP LGNSSFPQEA+FEIT L S E +V + EGE+TKLI E +NA A Sbjct: 24 SVIRTALPLPGPPLGNSSFPQEAYFEITILFSGEGDPESVGRVKEGERTKLIHENSNAKA 83 Query: 180 QS------DELKIAIKDEGR 221 S +E+K+ KD+G+ Sbjct: 84 NSESIIHLEEMKLGSKDDGK 103 >ref|XP_002326948.1| predicted protein [Populus trichocarpa] gi|222835263|gb|EEE73698.1| predicted protein [Populus trichocarpa] Length = 302 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Frame = +3 Query: 3 SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSREDGVRNVSKG-EGEKTKLIQEVANANA 179 SV++TALPLPGP LGNSSFPQEA+FEIT L S D + K EGE+ KLIQE NA A Sbjct: 176 SVIRTALPLPGPPLGNSSFPQEAYFEITVLYSHGDDQESAGKAKEGERAKLIQEKPNAKA 235 Query: 180 QSDEL 194 S+ L Sbjct: 236 NSESL 240 >ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478198|gb|AES59401.1| Protein ssh4 [Medicago truncatula] Length = 446 Score = 68.2 bits (165), Expect = 7e-10 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 2/76 (2%) Frame = +3 Query: 3 SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSREDG-VRNVSKGEGEKTKLIQEVANANA 179 SV++T+LPLPGPFLGN +FPQEA+FEIT L S +G V + EGEKTKL+ E ++N Sbjct: 163 SVIRTSLPLPGPFLGNHAFPQEAYFEITILYSSWNGDYELVGRREGEKTKLLIE-DSSND 221 Query: 180 QSDELKI-AIKDEGRS 224 + D + +K EG+S Sbjct: 222 EGDLKSVEEMKVEGKS 237 >ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788520 [Glycine max] Length = 465 Score = 66.6 bits (161), Expect = 2e-09 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 5/77 (6%) Frame = +3 Query: 3 SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSR-EDGVRNVSKGEGEKTKLIQEVANANA 179 SV++T LPLPGP LGN +FPQEA+FEIT L S +D V+K EGEKTKL+ E + A Sbjct: 183 SVIRTVLPLPGPPLGNYAFPQEAYFEITILFSHIDDHELVVAKREGEKTKLLIEDGSNGA 242 Query: 180 QS----DELKIAIKDEG 218 +E+K+ K+ G Sbjct: 243 SELDTVEEMKLGQKEGG 259 >ref|XP_002510180.1| conserved hypothetical protein [Ricinus communis] gi|223550881|gb|EEF52367.1| conserved hypothetical protein [Ricinus communis] Length = 480 Score = 65.9 bits (159), Expect = 3e-09 Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 19/92 (20%) Frame = +3 Query: 3 SVVQTALPLPGPFLGNSSFPQEAFFEITTLSSR---EDGVRNVSKGEGEKTKLIQEVANA 173 SV++T LPLPGP LGNS+FPQEA+FEIT L + D EGEKTKLIQE +N Sbjct: 179 SVIRTGLPLPGPPLGNSAFPQEAYFEITVLYCQGHYHDHSVVAKIREGEKTKLIQENSNH 238 Query: 174 NAQS---------------DELKIAI-KDEGR 221 S +ELK+A KDEG+ Sbjct: 239 RMNSESLAHVTSSHRFNKFEELKLATGKDEGK 270