BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017539
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]                159   3e-37
ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyr...   158   4e-37
gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]      158   4e-37
ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [...   158   5e-37
ref|XP_003562090.1| PREDICTED: uncharacterized protein LOC100840...   157   6e-37

>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/74 (98%), Positives = 74/74 (100%)
 Frame = +3

Query: 63   KMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 242
            +MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR
Sbjct: 1203 EMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHR 1262

Query: 243  PEPHIMLFRRPLNY 284
            PEPHIMLFRRPLNY
Sbjct: 1263 PEPHIMLFRRPLNY 1276


>ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297324964|gb|EFH55384.1| cdk-subunit 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 87

 Score =  158 bits (400), Expect = 4e-37
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = +3

Query: 66  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 245
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 246 EPHIMLFRRPLNY 284
           EPHIMLFRRPLNY
Sbjct: 61  EPHIMLFRRPLNY 73


>gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]
          Length = 88

 Score =  158 bits (400), Expect = 4e-37
 Identities = 73/73 (100%), Positives = 73/73 (100%)
 Frame = +3

Query: 66  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 245
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 246 EPHIMLFRRPLNY 284
           EPHIMLFRRPLNY
Sbjct: 61  EPHIMLFRRPLNY 73


>ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [Arabidopsis
           thaliana] gi|75097781|sp|O23249.1|CKS1_ARATH RecName:
           Full=Cyclin-dependent kinases regulatory subunit 1;
           AltName: Full=CKS1-At gi|2274859|emb|CAA03859.1| Cks1
           protein [Arabidopsis thaliana] gi|4510420|gb|AAD21506.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|21593913|gb|AAM65878.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969580|dbj|BAD43482.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969798|dbj|BAD43591.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51970380|dbj|BAD43882.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|88010880|gb|ABD38867.1|
           At2g27960 [Arabidopsis thaliana]
           gi|330252970|gb|AEC08064.1| cyclin-dependent kinases
           regulatory subunit 1 [Arabidopsis thaliana]
          Length = 87

 Score =  158 bits (399), Expect = 5e-37
 Identities = 72/73 (98%), Positives = 73/73 (100%)
 Frame = +3

Query: 66  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 245
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 246 EPHIMLFRRPLNY 284
           EPHIMLFRRPLNY
Sbjct: 61  EPHIMLFRRPLNY 73


>ref|XP_003562090.1| PREDICTED: uncharacterized protein LOC100840494 [Brachypodium
           distachyon]
          Length = 184

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/83 (86%), Positives = 78/83 (93%)
 Frame = +3

Query: 36  KAIHFTLI*KMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSR 215
           K +   L+ +MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLL+ENEWRA+GVQQSR
Sbjct: 85  KRLDRELLVEMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLAENEWRALGVQQSR 144

Query: 216 GWVHYAIHRPEPHIMLFRRPLNY 284
           GWVHYA+HRPEPHIMLFRRPLNY
Sbjct: 145 GWVHYAVHRPEPHIMLFRRPLNY 167