BLASTX nr result

ID: Coptis24_contig00017528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017528
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152215.1| PREDICTED: periodic tryptophan protein 2 hom...   174   7e-42
ref|XP_002304160.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
dbj|BAJ53251.1| JHL25H03.15 [Jatropha curcas]                         173   2e-41
ref|XP_002299610.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002517579.1| WD-repeat protein, putative [Ricinus communi...   170   1e-40

>ref|XP_004152215.1| PREDICTED: periodic tryptophan protein 2 homolog [Cucumis sativus]
           gi|449484190|ref|XP_004156811.1| PREDICTED: periodic
           tryptophan protein 2 homolog [Cucumis sativus]
          Length = 892

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/126 (67%), Positives = 99/126 (78%)
 Frame = +3

Query: 45  MNFRFQNLLGAPYRGGNAVITENSLLISPISNRISITDLIKSHTQTLPXXXXXXXXXXXX 224
           MN+RFQNLLGAPYRGGN +I+E++LLISP+ NRIS+TDL+KS T TLP            
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTTTLPLQSSSNICRIAL 60

Query: 225 XPDGTFLITIDEKSRCHFINLRCKVVLHRMSFKKAVNVVKFSKDGNFIAFGVGKLVQIWR 404
            PDG FL T+DEK+RC FINLR +VVLHR+SFKK V+VVKFS DG  IA G GKLVQIWR
Sbjct: 61  SPDGVFLFTVDEKNRCLFINLRRRVVLHRISFKKPVSVVKFSPDGANIAVGTGKLVQIWR 120

Query: 405 SPGFRK 422
           +PGFRK
Sbjct: 121 APGFRK 126


>ref|XP_002304160.1| predicted protein [Populus trichocarpa] gi|222841592|gb|EEE79139.1|
           predicted protein [Populus trichocarpa]
          Length = 889

 Score =  173 bits (439), Expect = 1e-41
 Identities = 82/126 (65%), Positives = 95/126 (75%)
 Frame = +3

Query: 45  MNFRFQNLLGAPYRGGNAVITENSLLISPISNRISITDLIKSHTQTLPXXXXXXXXXXXX 224
           MN+RFQNLLGAPYRGGN VIT+N+ LISP+ NR+SITDLIKS T TLP            
Sbjct: 1   MNYRFQNLLGAPYRGGNVVITQNTQLISPVGNRVSITDLIKSQTITLPLQSSSNIRRIAA 60

Query: 225 XPDGTFLITIDEKSRCHFINLRCKVVLHRMSFKKAVNVVKFSKDGNFIAFGVGKLVQIWR 404
            PDGTFL+T+DE  RCHFIN   +V+LHR++FK  VN VKFS DG FIA   GKLVQ+WR
Sbjct: 61  SPDGTFLLTVDENHRCHFINTARRVILHRINFKNTVNAVKFSPDGKFIAVAAGKLVQLWR 120

Query: 405 SPGFRK 422
           SPGF+K
Sbjct: 121 SPGFKK 126


>dbj|BAJ53251.1| JHL25H03.15 [Jatropha curcas]
          Length = 892

 Score =  173 bits (438), Expect = 2e-41
 Identities = 80/126 (63%), Positives = 98/126 (77%)
 Frame = +3

Query: 45  MNFRFQNLLGAPYRGGNAVITENSLLISPISNRISITDLIKSHTQTLPXXXXXXXXXXXX 224
           MN+RFQNLLGAPYRGGNAVIT+N+ LISP+ NR+SITDL+KS T TLP            
Sbjct: 1   MNYRFQNLLGAPYRGGNAVITQNTQLISPVGNRVSITDLVKSQTITLPVQSSSNIRRLAV 60

Query: 225 XPDGTFLITIDEKSRCHFINLRCKVVLHRMSFKKAVNVVKFSKDGNFIAFGVGKLVQIWR 404
            PDGTFL+T+DE +RCHFIN+  + VLHR++FKK VN ++FS DG +IA   GKLVQIWR
Sbjct: 61  SPDGTFLLTVDENNRCHFINIPRRAVLHRITFKKTVNALRFSPDGKYIAVAAGKLVQIWR 120

Query: 405 SPGFRK 422
           SPGF++
Sbjct: 121 SPGFKR 126


>ref|XP_002299610.1| predicted protein [Populus trichocarpa] gi|222846868|gb|EEE84415.1|
           predicted protein [Populus trichocarpa]
          Length = 892

 Score =  172 bits (437), Expect = 2e-41
 Identities = 81/126 (64%), Positives = 96/126 (76%)
 Frame = +3

Query: 45  MNFRFQNLLGAPYRGGNAVITENSLLISPISNRISITDLIKSHTQTLPXXXXXXXXXXXX 224
           MN+RF NLLGAPYRGGN VIT+N+ LISP+ NR+SITDL+KS T TLP            
Sbjct: 1   MNYRFHNLLGAPYRGGNVVITQNTQLISPVGNRVSITDLLKSQTITLPLQSSSNIRRIAA 60

Query: 225 XPDGTFLITIDEKSRCHFINLRCKVVLHRMSFKKAVNVVKFSKDGNFIAFGVGKLVQIWR 404
            PDGTFL+T+DE  RCHFIN+  +V+LHR++FK AVN +KFS DG FIA   GKLVQIWR
Sbjct: 61  SPDGTFLLTVDENHRCHFINIPRRVILHRINFKNAVNALKFSPDGKFIAVAAGKLVQIWR 120

Query: 405 SPGFRK 422
           SPGF+K
Sbjct: 121 SPGFKK 126


>ref|XP_002517579.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543211|gb|EEF44743.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 895

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/126 (66%), Positives = 97/126 (76%)
 Frame = +3

Query: 45  MNFRFQNLLGAPYRGGNAVITENSLLISPISNRISITDLIKSHTQTLPXXXXXXXXXXXX 224
           MN+RFQNLLGAPYRGGNAVIT+N+ LISP+ NR+SITDLIKS T TLP            
Sbjct: 1   MNYRFQNLLGAPYRGGNAVITQNTQLISPVGNRVSITDLIKSQTITLPLQSSSNIRRIAA 60

Query: 225 XPDGTFLITIDEKSRCHFINLRCKVVLHRMSFKKAVNVVKFSKDGNFIAFGVGKLVQIWR 404
            PDGTFLITIDE +RC FIN+  +VVLHR+SFKK V+ V+FS +G  IA   GKLVQIWR
Sbjct: 61  SPDGTFLITIDENNRCQFINIPRRVVLHRISFKKPVSSVRFSPNGKLIAVATGKLVQIWR 120

Query: 405 SPGFRK 422
           SPGF+K
Sbjct: 121 SPGFKK 126


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