BLASTX nr result

ID: Coptis24_contig00017512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017512
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462297.1| hypothetical protein SORBIDRAFT_02g023450 [S...   164   9e-39
ref|NP_001063029.1| Os09g0373000 [Oryza sativa Japonica Group] g...   164   1e-38
ref|XP_002463699.1| hypothetical protein SORBIDRAFT_01g004480 [S...   162   3e-38
gb|ACG29463.1| brain protein 44-like protein [Zea mays] gi|19564...   161   6e-38
ref|NP_001105682.1| brain protein 44-like [Zea mays] gi|54111523...   161   6e-38

>ref|XP_002462297.1| hypothetical protein SORBIDRAFT_02g023450 [Sorghum bicolor]
           gi|241925674|gb|EER98818.1| hypothetical protein
           SORBIDRAFT_02g023450 [Sorghum bicolor]
          Length = 107

 Score =  164 bits (415), Expect = 9e-39
 Identities = 76/105 (72%), Positives = 83/105 (79%)
 Frame = -1

Query: 367 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXADMQKPPEMISGKMTAVMCVYSGLCM 188
           MS   KAF+NSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MSTALKAFINSPVGPKTTHFWGPVANWGFVIAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 187 RFAWMVRPRNYLLLACHATNEPAQLYLLSRWAKAQGYFEQKKPEA 53
           RFAWMV+PRNYLLLACHA+NE  QLY LSRWA+AQGY E+K+PEA
Sbjct: 61  RFAWMVQPRNYLLLACHASNESVQLYQLSRWARAQGYLEKKEPEA 105


>ref|NP_001063029.1| Os09g0373000 [Oryza sativa Japonica Group]
           gi|49387802|dbj|BAD26367.1| brain protein 44-like [Oryza
           sativa Japonica Group] gi|113631262|dbj|BAF24943.1|
           Os09g0373000 [Oryza sativa Japonica Group]
           gi|215765123|dbj|BAG86820.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218202048|gb|EEC84475.1| hypothetical protein
           OsI_31133 [Oryza sativa Indica Group]
           gi|222641459|gb|EEE69591.1| hypothetical protein
           OsJ_29139 [Oryza sativa Japonica Group]
          Length = 107

 Score =  164 bits (414), Expect = 1e-38
 Identities = 76/105 (72%), Positives = 83/105 (79%)
 Frame = -1

Query: 367 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXADMQKPPEMISGKMTAVMCVYSGLCM 188
           MS   KAFLNSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MSTAVKAFLNSPVGPKTTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 187 RFAWMVRPRNYLLLACHATNEPAQLYLLSRWAKAQGYFEQKKPEA 53
           RFAWMV+PRNYLLLACHA+NE  QLY +SRWA+AQGY E+K+PEA
Sbjct: 61  RFAWMVQPRNYLLLACHASNESVQLYQMSRWARAQGYLEKKEPEA 105


>ref|XP_002463699.1| hypothetical protein SORBIDRAFT_01g004480 [Sorghum bicolor]
           gi|241917553|gb|EER90697.1| hypothetical protein
           SORBIDRAFT_01g004480 [Sorghum bicolor]
          Length = 107

 Score =  162 bits (411), Expect = 3e-38
 Identities = 75/105 (71%), Positives = 83/105 (79%)
 Frame = -1

Query: 367 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXADMQKPPEMISGKMTAVMCVYSGLCM 188
           M+   K+FLNSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MATALKSFLNSPVGPKTTHFWGPVANWGFVIAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 187 RFAWMVRPRNYLLLACHATNEPAQLYLLSRWAKAQGYFEQKKPEA 53
           RFAWMV+PRNYLLLACHA+NE  QLY LSRWA+AQGY E+K+PEA
Sbjct: 61  RFAWMVQPRNYLLLACHASNESVQLYQLSRWARAQGYLEKKEPEA 105


>gb|ACG29463.1| brain protein 44-like protein [Zea mays]
           gi|195640402|gb|ACG39669.1| brain protein 44-like
           protein [Zea mays] gi|414873464|tpg|DAA52021.1| TPA:
           brain protein 44-like protein [Zea mays]
          Length = 107

 Score =  161 bits (408), Expect = 6e-38
 Identities = 74/105 (70%), Positives = 83/105 (79%)
 Frame = -1

Query: 367 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXADMQKPPEMISGKMTAVMCVYSGLCM 188
           M+   K+FLNSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MATALKSFLNSPVGPKTTHFWGPVANWGFVIAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 187 RFAWMVRPRNYLLLACHATNEPAQLYLLSRWAKAQGYFEQKKPEA 53
           RFAWMV+PRNYLLLACHA+NE  QLY LSRWA++QGY E+K+PEA
Sbjct: 61  RFAWMVQPRNYLLLACHASNESVQLYQLSRWARSQGYLEKKEPEA 105


>ref|NP_001105682.1| brain protein 44-like [Zea mays] gi|54111523|gb|AAV28624.1| brain
           protein 44-like [Zea mays]
          Length = 107

 Score =  161 bits (408), Expect = 6e-38
 Identities = 74/105 (70%), Positives = 83/105 (79%)
 Frame = -1

Query: 367 MSPVFKAFLNSPVGPKTTHFWGPLXXXXXXXXXXADMQKPPEMISGKMTAVMCVYSGLCM 188
           M+   K+FLNSPVGPKTTHFWGP+           DM KPPEMISG MTA MCVYSGL M
Sbjct: 1   MATALKSFLNSPVGPKTTHFWGPVANWGFVVAGLVDMNKPPEMISGNMTAAMCVYSGLFM 60

Query: 187 RFAWMVRPRNYLLLACHATNEPAQLYLLSRWAKAQGYFEQKKPEA 53
           RFAWMV+PRNYLLLACHA+NE  QLY LSRWA++QGY E+K+PEA
Sbjct: 61  RFAWMVQPRNYLLLACHASNESVQLYQLSRWARSQGYLEKKEPEA 105


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