BLASTX nr result
ID: Coptis24_contig00017511
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017511 (229 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241... 90 2e-16 emb|CBI18109.3| unnamed protein product [Vitis vinifera] 90 2e-16 ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2... 75 4e-12 ref|XP_002526678.1| breast cancer type 2 susceptibility protein ... 75 6e-12 ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabido... 65 6e-09 >ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera] Length = 1126 Score = 89.7 bits (221), Expect = 2e-16 Identities = 41/76 (53%), Positives = 55/76 (72%) Frame = +1 Query: 1 GPLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGST 180 GPLVD+SN I T ++K EKR LG+RSSISPFK PRS++F PL SN+SF NG + Sbjct: 384 GPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVSFVPNGLS 443 Query: 181 ALKAEESCCKGKISVR 228 L +E++CC+ ++S R Sbjct: 444 TLASEDTCCRKRVSTR 459 >emb|CBI18109.3| unnamed protein product [Vitis vinifera] Length = 1134 Score = 89.7 bits (221), Expect = 2e-16 Identities = 41/76 (53%), Positives = 55/76 (72%) Frame = +1 Query: 1 GPLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGST 180 GPLVD+SN I T ++K EKR LG+RSSISPFK PRS++F PL SN+SF NG + Sbjct: 407 GPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVSFVPNGLS 466 Query: 181 ALKAEESCCKGKISVR 228 L +E++CC+ ++S R Sbjct: 467 TLASEDTCCRKRVSTR 482 >ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1| predicted protein [Populus trichocarpa] Length = 1186 Score = 75.5 bits (184), Expect = 4e-12 Identities = 37/75 (49%), Positives = 50/75 (66%) Frame = +1 Query: 4 PLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGSTA 183 PL DISN I TAY++ + EKR LG+ SISPFK PRS++F+TPL N+S +G + Sbjct: 459 PLPDISNTIGTAYSNNGQANGEKRKLGRGISISPFKKPRSSKFTTPLNRNVSSVPSGLST 518 Query: 184 LKAEESCCKGKISVR 228 + E S C+ K+S R Sbjct: 519 VSYESSSCRKKVSTR 533 >ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus communis] gi|223533978|gb|EEF35700.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus communis] Length = 1156 Score = 75.1 bits (183), Expect = 6e-12 Identities = 36/76 (47%), Positives = 51/76 (67%) Frame = +1 Query: 1 GPLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGST 180 GPLVDISN I + Y + +H + EK+ +G+RSS SPFK PRS +F+TPL N ++ +G + Sbjct: 395 GPLVDISNTIGSCYTNHRHDNIEKKRVGRRSSTSPFKRPRSCKFTTPLNRNYAYAPSGLS 454 Query: 181 ALKAEESCCKGKISVR 228 A +E S + IS R Sbjct: 455 ASSSENSGFRHSISTR 470 >ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabidopsis thaliana] gi|31335362|emb|CAD32572.1| breast cancer susceptibility protein 2b [Arabidopsis thaliana] gi|332002986|gb|AED90369.1| breast cancer 2 susceptibility protein [Arabidopsis thaliana] Length = 1155 Score = 65.1 bits (157), Expect = 6e-09 Identities = 33/75 (44%), Positives = 44/75 (58%) Frame = +1 Query: 4 PLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGSTA 183 PLVDI+N DTAYA+ K S +K+ LGK S+SPFK PR + F TPL N +G + Sbjct: 427 PLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPLKKNAQQASSGLSV 486 Query: 184 LKAEESCCKGKISVR 228 + + K +S R Sbjct: 487 VSCDTLTSKKVLSTR 501