BLASTX nr result

ID: Coptis24_contig00017511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017511
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...    90   2e-16
emb|CBI18109.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...    75   6e-12
ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabido...    65   6e-09

>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/76 (53%), Positives = 55/76 (72%)
 Frame = +1

Query: 1   GPLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGST 180
           GPLVD+SN I T   ++K    EKR LG+RSSISPFK PRS++F  PL SN+SF  NG +
Sbjct: 384 GPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVSFVPNGLS 443

Query: 181 ALKAEESCCKGKISVR 228
            L +E++CC+ ++S R
Sbjct: 444 TLASEDTCCRKRVSTR 459


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/76 (53%), Positives = 55/76 (72%)
 Frame = +1

Query: 1   GPLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGST 180
           GPLVD+SN I T   ++K    EKR LG+RSSISPFK PRS++F  PL SN+SF  NG +
Sbjct: 407 GPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVSFVPNGLS 466

Query: 181 ALKAEESCCKGKISVR 228
            L +E++CC+ ++S R
Sbjct: 467 TLASEDTCCRKRVSTR 482


>ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1|
           predicted protein [Populus trichocarpa]
          Length = 1186

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +1

Query: 4   PLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGSTA 183
           PL DISN I TAY++    + EKR LG+  SISPFK PRS++F+TPL  N+S   +G + 
Sbjct: 459 PLPDISNTIGTAYSNNGQANGEKRKLGRGISISPFKKPRSSKFTTPLNRNVSSVPSGLST 518

Query: 184 LKAEESCCKGKISVR 228
           +  E S C+ K+S R
Sbjct: 519 VSYESSSCRKKVSTR 533


>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis] gi|223533978|gb|EEF35700.1| breast
           cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis]
          Length = 1156

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = +1

Query: 1   GPLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGST 180
           GPLVDISN I + Y + +H + EK+ +G+RSS SPFK PRS +F+TPL  N ++  +G +
Sbjct: 395 GPLVDISNTIGSCYTNHRHDNIEKKRVGRRSSTSPFKRPRSCKFTTPLNRNYAYAPSGLS 454

Query: 181 ALKAEESCCKGKISVR 228
           A  +E S  +  IS R
Sbjct: 455 ASSSENSGFRHSISTR 470


>ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabidopsis thaliana]
           gi|31335362|emb|CAD32572.1| breast cancer susceptibility
           protein 2b [Arabidopsis thaliana]
           gi|332002986|gb|AED90369.1| breast cancer 2
           susceptibility protein [Arabidopsis thaliana]
          Length = 1155

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/75 (44%), Positives = 44/75 (58%)
 Frame = +1

Query: 4   PLVDISNNIDTAYADQKHFSREKRNLGKRSSISPFKMPRSTRFSTPLTSNISFPRNGSTA 183
           PLVDI+N  DTAYA+ K  S +K+ LGK  S+SPFK PR + F TPL  N     +G + 
Sbjct: 427 PLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFKRPRISSFKTPLKKNAQQASSGLSV 486

Query: 184 LKAEESCCKGKISVR 228
           +  +    K  +S R
Sbjct: 487 VSCDTLTSKKVLSTR 501


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