BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017509
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_002527517.1| catalytic, putative [Ricinus communis] gi|22...   199   3e-49
ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methy...   197   7e-49
ref|XP_002885320.1| hypothetical protein ARALYDRAFT_318717 [Arab...   178   5e-43
ref|NP_188597.1| radical SAM domain-containing protein [Arabidop...   176   2e-42

>ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|222847524|gb|EEE85071.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/140 (68%), Positives = 110/140 (78%)
 Frame = -3

Query: 420 MAFRSVFDFGSIKKEFVKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 241
           M   S+FD   ++ EF KA INT+FIP IWKYVI+NPNCE  ++P LP+ A++       
Sbjct: 1   MGVGSIFDGPDVRAEFEKAGINTHFIPFIWKYVIKNPNCEWDDIPDLPSAAYSLLRSKFK 60

Query: 240 XXXXTVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDNRLGTYGGKPRPGGPRATLCIS 61
               +VDSV+ SND VTTKLLVKLQNGA+VEAVIMRYD RLG Y GKPRPGGPR+TLCIS
Sbjct: 61  TSTSSVDSVINSNDGVTTKLLVKLQNGAFVEAVIMRYDTRLGKYCGKPRPGGPRSTLCIS 120

Query: 60  SQVGCKMGCKFCATGSMGFK 1
           SQVGCKMGCKFCATGSMGFK
Sbjct: 121 SQVGCKMGCKFCATGSMGFK 140


>ref|XP_002527517.1| catalytic, putative [Ricinus communis] gi|223533157|gb|EEF34915.1|
           catalytic, putative [Ricinus communis]
          Length = 337

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/136 (67%), Positives = 112/136 (82%)
 Frame = -3

Query: 408 SVFDFGSIKKEFVKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXXXXXX 229
           S+FD   +K+EF +A I+ +F+PLIWKYVI+NPNCE  ++P+LP+ A++           
Sbjct: 47  SIFDAPDLKREFQEANISLHFVPLIWKYVIKNPNCEWDQIPNLPSAAYSLLKSKFTTFTS 106

Query: 228 TVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDNRLGTYGGKPRPGGPRATLCISSQVG 49
           T+ SV+ES+D VTTKLL+KLQNGA+VEAVIMRYD RLG YGGKPRPGGPR+TLCISSQVG
Sbjct: 107 TLHSVIESSDGVTTKLLIKLQNGAFVEAVIMRYDTRLGNYGGKPRPGGPRSTLCISSQVG 166

Query: 48  CKMGCKFCATGSMGFK 1
           CKMGCKFCATGSMGFK
Sbjct: 167 CKMGCKFCATGSMGFK 182


>ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
           vinifera] gi|147817733|emb|CAN60150.1| hypothetical
           protein VITISV_044331 [Vitis vinifera]
           gi|296083052|emb|CBI22456.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score =  197 bits (501), Expect = 7e-49
 Identities = 90/140 (64%), Positives = 112/140 (80%)
 Frame = -3

Query: 420 MAFRSVFDFGSIKKEFVKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 241
           MA  S+FD G ++++F  A I+ NFIP IWKYV+QNPNC+  ++ SLP+ A+        
Sbjct: 1   MAISSIFDGGELRRQFHSAGISPNFIPFIWKYVVQNPNCDWDDITSLPSAAYPLLRSHFK 60

Query: 240 XXXXTVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDNRLGTYGGKPRPGGPRATLCIS 61
               ++ +V++S+DNVTTKLL+KLQNG++VEAVIMRYD RLG YGGKPRPGGPR+TLCIS
Sbjct: 61  PSTSSLHTVIDSSDNVTTKLLIKLQNGSFVEAVIMRYDTRLGKYGGKPRPGGPRSTLCIS 120

Query: 60  SQVGCKMGCKFCATGSMGFK 1
           SQVGCKMGCKFCATGSMGFK
Sbjct: 121 SQVGCKMGCKFCATGSMGFK 140


>ref|XP_002885320.1| hypothetical protein ARALYDRAFT_318717 [Arabidopsis lyrata subsp.
           lyrata] gi|297331160|gb|EFH61579.1| hypothetical protein
           ARALYDRAFT_318717 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score =  178 bits (451), Expect = 5e-43
 Identities = 86/140 (61%), Positives = 102/140 (72%)
 Frame = -3

Query: 420 MAFRSVFDFGSIKKEFVKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 241
           M  +SVFD   IK EF  A IN NF   IWKYVIQNP+C   E+PSLP+ A++       
Sbjct: 1   MKLKSVFDASEIKSEFESAGINPNFAIPIWKYVIQNPDCVWDEIPSLPSAAYSLLHSKFK 60

Query: 240 XXXXTVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDNRLGTYGGKPRPGGPRATLCIS 61
               ++ S+  S+D  T+KLL+KLQNGA+VEAV+MRYD RLG  GGKPRPGG R+TLCIS
Sbjct: 61  TLTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCIS 120

Query: 60  SQVGCKMGCKFCATGSMGFK 1
           SQVGCKMGC FCATG+MGFK
Sbjct: 121 SQVGCKMGCTFCATGTMGFK 140


>ref|NP_188597.1| radical SAM domain-containing protein [Arabidopsis thaliana]
           gi|28393068|gb|AAO41968.1| unknown protein [Arabidopsis
           thaliana] gi|28827394|gb|AAO50541.1| unknown protein
           [Arabidopsis thaliana] gi|332642748|gb|AEE76269.1|
           radical SAM domain-containing protein [Arabidopsis
           thaliana]
          Length = 372

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/140 (60%), Positives = 101/140 (72%)
 Frame = -3

Query: 420 MAFRSVFDFGSIKKEFVKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 241
           M  +SVFD   IK EF  A IN  F   IWKYVIQNP+C   E+PSLP+ A++       
Sbjct: 1   MKLKSVFDASEIKSEFESAGINPKFAIQIWKYVIQNPDCVWDEIPSLPSAAYSLLHSKFK 60

Query: 240 XXXXTVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDNRLGTYGGKPRPGGPRATLCIS 61
               ++ S+  S+D  T+KLL+KLQNGA+VEAV+MRYD RLG  GGKPRPGG R+TLCIS
Sbjct: 61  TLTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCIS 120

Query: 60  SQVGCKMGCKFCATGSMGFK 1
           SQVGCKMGC FCATG+MGFK
Sbjct: 121 SQVGCKMGCTFCATGTMGFK 140