BLASTX nr result

ID: Coptis24_contig00017507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017507
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA75349.1| ERT2 [Arabidopsis thaliana]                            99   5e-19
ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [...    99   5e-19
ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arab...    98   2e-18
ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_004158096.1| PREDICTED: uncharacterized protein LOC101226...    93   5e-17

>emb|CAA75349.1| ERT2 [Arabidopsis thaliana]
          Length = 407

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
 Frame = +1

Query: 55  KKKFTRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRDRLNKKKTRKNNSQNEIV 234
           K K +R+SRFV+D + S KHG SLVV+TGFPTSLIDL VKNRDRL K+ +++NN  N+  
Sbjct: 7   KSKSSRISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKKQSSKRNNKNNK-- 64

Query: 235 ACCSEIEEGQDGPVLP-------LSIP--LAPFILNAINNLFGXXXXXXXXXXXXXXXXL 387
              ++ E     P  P       +S+P  L P ++   + L                  +
Sbjct: 65  ---AQTETRVLSPPPPHMSLQRRMSLPSKLDPALVTEDSPL------VRKIEETSVPEII 115

Query: 388 NEDRVVDFHVGDVSSSSRFYKIFIMMSVVLVLALATKRLVIGITLSAFLLFFIEFCCNNL 567
           +ED     H G          +   + +V VLAL+TK+L +GITLSAF L F+E     +
Sbjct: 116 HEDD--GGHRGGGGGGCVLIVVVFKVFMVAVLALSTKKLAVGITLSAFALLFLELAVARV 173

Query: 568 ISLLKSC 588
            + L  C
Sbjct: 174 FTYLNLC 180


>ref|NP_193820.1| ethylene-responsive/regulated nuclear protein [Arabidopsis
           thaliana] gi|5262778|emb|CAB45883.1| ethylene-regulated
           transcript 2 (ERT2) [Arabidopsis thaliana]
           gi|7268884|emb|CAB79088.1| ethylene-regulated transcript
           2 (ERT2) [Arabidopsis thaliana]
           gi|26452095|dbj|BAC43137.1| putative ethylene-regulated
           transcript 2 ERT2 [Arabidopsis thaliana]
           gi|332658971|gb|AEE84371.1|
           ethylene-responsive/regulated nuclear protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
 Frame = +1

Query: 55  KKKFTRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRDRLNKKKTRKNNSQNEIV 234
           K K +R+SRFV+D + S KHG SLVV+TGFPTSLIDL VKNRDRL K+ +++NN  N+  
Sbjct: 7   KSKSSRISRFVSDFQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKKQSSKRNNKNNK-- 64

Query: 235 ACCSEIEEGQDGPVLP-------LSIP--LAPFILNAINNLFGXXXXXXXXXXXXXXXXL 387
              ++ E     P  P       +S+P  L P ++   + L                  +
Sbjct: 65  ---AQTETRVLSPPPPHMSLQRRMSLPSKLDPALVTEDSPL------VRKIEETSVPEII 115

Query: 388 NEDRVVDFHVGDVSSSSRFYKIFIMMSVVLVLALATKRLVIGITLSAFLLFFIEFCCNNL 567
           +ED     H G          +   + +V VLAL+TK+L +GITLSAF L F+E     +
Sbjct: 116 HEDD--GGHRGGGGGGCVLIVVVFKVFMVAVLALSTKKLAVGITLSAFALLFLELAVARV 173

Query: 568 ISLLKSC 588
            + L  C
Sbjct: 174 FTYLNLC 180


>ref|XP_002867871.1| hypothetical protein ARALYDRAFT_492798 [Arabidopsis lyrata subsp.
           lyrata] gi|297313707|gb|EFH44130.1| hypothetical protein
           ARALYDRAFT_492798 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 68/192 (35%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
 Frame = +1

Query: 55  KKKFTRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRDRLNKKKTRKNNSQNEIV 234
           K K +R+SRFV+D++ S KHG SLVV+TGFPTSLIDL VKNRDRL K+ +++NN  N+  
Sbjct: 7   KSKSSRISRFVSDLQQSPKHGGSLVVETGFPTSLIDLFVKNRDRLKKQSSKRNNKNNK-- 64

Query: 235 ACCSEIEEGQDGPV--LPLSIPLAPFILNAINNLFGXXXXXXXXXXXXXXXXLNEDRVVD 408
                  + Q  P     LS P  P  L    +L                  + E  + +
Sbjct: 65  --AQTTAQTQTVPTKRRVLSPPPPPLSLQRRMSLPSKLDPALVTEDPPLVSKIEESFIPE 122

Query: 409 -FHVGDVSSSSR-----------FYKIFIMMSVVLVLALATKRLVIGITLSAFLLFFIEF 552
             H G+    +               +   + +V VLAL+TK+L +GITLSAF L F+E 
Sbjct: 123 NRHDGEDDGGNGGNRGGGGGGCVLMVVVFKVFMVAVLALSTKKLAVGITLSAFSLLFLEL 182

Query: 553 CCNNLISLLKSC 588
               + + L  C
Sbjct: 183 AVARVFTYLNLC 194


>ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|222872114|gb|EEF09245.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
 Frame = +1

Query: 55  KKKFTRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRDRLNK---KKTRKNNSQN 225
           K K  R SR VAD++S  K G SLVV+TGFPTSL+DL VKNR+RL K   KK +K   Q 
Sbjct: 7   KDKVARFSRIVADLQSP-KRGNSLVVETGFPTSLVDLFVKNRERLKKPTGKKKKKKKRQQ 65

Query: 226 EIVACCSEIEE-----------------GQDGPVLPLSIPLAPFILNAINNLFGXXXXXX 354
           ++     E+EE                    GP+  L    +  + + ++ L        
Sbjct: 66  QL----QEVEEELVISDPIFVSSSIELVDSPGPIQNLENMESFDVCDLVSQLLPVVEDDE 121

Query: 355 XXXXXXXXXXLNEDRVVDFHVGDVSSSSRFYKIFIMMSVVLVLALATKRLVIGITLSAFL 534
                     +++ +V D    +     R   + + M +V+VL L+TK+LV+GIT+SAF+
Sbjct: 122 DVEDVDDVEDVDDVKVTDKKCWN-EKEKRLLFVVLKMFLVVVLGLSTKKLVVGITMSAFV 180

Query: 535 LFFIEFCCNNLISLLKSCIN 594
           L F+E+   +++  LK C+N
Sbjct: 181 LIFLEYVGKHVLCFLKPCLN 200


>ref|XP_004158096.1| PREDICTED: uncharacterized protein LOC101226968 [Cucumis sativus]
          Length = 439

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 73/210 (34%), Positives = 102/210 (48%), Gaps = 16/210 (7%)
 Frame = +1

Query: 67  TRVSRFVADIRSSSKHGESLVVQTGFPTSLIDLIVKNRDRLNKKKTRKNNSQNEIVACCS 246
           +R+S+ VAD+ S  K   SLVV+TGFPTS++DL VK+RDRL K   R+ + + + +    
Sbjct: 12  SRISQIVADLHSP-KRASSLVVETGFPTSIVDLFVKHRDRLRKHSARRKSKKKKKITK-- 68

Query: 247 EIEEGQDGPVLPLSIPLAPFILNAIN---------NLFGXXXXXXXXXXXXXXXXLNEDR 399
              E  D         L+P  L++I          NL                  + +  
Sbjct: 69  --NEFHDSIA-----QLSPLELDSIGSSGSCVLRGNLEIEDLDEARKCSGRGCEPIRDRT 121

Query: 400 VVDFHVGDVSSSSRFYKIFIMMSVVLVLALATKRLVIGITLSAFLLFFIEFCCNNLISLL 579
                 GD +S + F    + M VV VLAL+ K+LV+GITLSAFLLF +EF    ++   
Sbjct: 122 ETCVVGGDAASGNGFCLFVLKMFVVAVLALSAKKLVVGITLSAFLLFLLEFLGTRIVRFF 181

Query: 580 KSCINGCKGF-----MVSIHL--GKDKNLI 648
           K CI+G          VS HL  GKD  +I
Sbjct: 182 KPCIHGEAALRSLIQKVSKHLWIGKDDPVI 211


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