BLASTX nr result

ID: Coptis24_contig00017500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017500
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284727.1| PREDICTED: uncharacterized protein LOC100252...   169   3e-40
emb|CBI18940.3| unnamed protein product [Vitis vinifera]              163   3e-38
ref|XP_002302208.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_004144252.1| PREDICTED: uncharacterized protein LOC101219...   160   2e-37
ref|XP_002520272.1| conserved hypothetical protein [Ricinus comm...   160   2e-37

>ref|XP_002284727.1| PREDICTED: uncharacterized protein LOC100252353 [Vitis vinifera]
          Length = 251

 Score =  169 bits (429), Expect = 3e-40
 Identities = 80/139 (57%), Positives = 101/139 (72%)
 Frame = +1

Query: 190 SSSPNRSYFISNKNFLTSTRRPQKVLVCSLAERKVSYNPLVFQAAKLLGPPARFESSKLK 369
           S SP R  F      L  +R  + V++ S+   K SYN LVF+AA+LLGPPA+F++SKLK
Sbjct: 10  SPSPQRDCFSMTHTSLKPSRASKPVVLSSIGSTKASYNALVFEAARLLGPPAKFDASKLK 69

Query: 370 VVFMEDEMHKGTGIIPRTYALSHCDLTANLTLAISNVINLDQLRGWYNRDDVVAEWNSVN 549
           VV M +E+   +GI PR Y LSHCD TANLTL ISN+I+LDQL+GWYN+DDVVAEW  V 
Sbjct: 70  VVPMGEEIDNYSGISPRVYTLSHCDFTANLTLTISNIISLDQLKGWYNKDDVVAEWKEVK 129

Query: 550 EETCLHVHCHVSGPNVMTD 606
            E CLHVHC++SGP++  D
Sbjct: 130 GEKCLHVHCYLSGPSLFLD 148


>emb|CBI18940.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  163 bits (412), Expect = 3e-38
 Identities = 75/124 (60%), Positives = 96/124 (77%)
 Frame = +1

Query: 235 LTSTRRPQKVLVCSLAERKVSYNPLVFQAAKLLGPPARFESSKLKVVFMEDEMHKGTGII 414
           L  +R  + V++ S+   K SYN LVF+AA+LLGPPA+F++SKLKVV M +E+   +GI 
Sbjct: 6   LKPSRASKPVVLSSIGSTKASYNALVFEAARLLGPPAKFDASKLKVVPMGEEIDNYSGIS 65

Query: 415 PRTYALSHCDLTANLTLAISNVINLDQLRGWYNRDDVVAEWNSVNEETCLHVHCHVSGPN 594
           PR Y LSHCD TANLTL ISN+I+LDQL+GWYN+DDVVAEW  V  E CLHVHC++SGP+
Sbjct: 66  PRVYTLSHCDFTANLTLTISNIISLDQLKGWYNKDDVVAEWKEVKGEKCLHVHCYLSGPS 125

Query: 595 VMTD 606
           +  D
Sbjct: 126 LFLD 129


>ref|XP_002302208.1| predicted protein [Populus trichocarpa] gi|222843934|gb|EEE81481.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  162 bits (411), Expect = 3e-38
 Identities = 77/139 (55%), Positives = 101/139 (72%)
 Frame = +1

Query: 190 SSSPNRSYFISNKNFLTSTRRPQKVLVCSLAERKVSYNPLVFQAAKLLGPPARFESSKLK 369
           S SP+  YF  N     S++  +  ++ S+   + SYN LV +A +LLGPPA+FE+SKLK
Sbjct: 15  SPSPHMRYFSINNITKLSSKVTKPTVLSSIDNSRASYNTLVSEAVRLLGPPAKFEASKLK 74

Query: 370 VVFMEDEMHKGTGIIPRTYALSHCDLTANLTLAISNVINLDQLRGWYNRDDVVAEWNSVN 549
           VV M +EM++ + IIPRTY LSHCD TA+LTL ISNVINLDQLRGWY++DDVV EW  + 
Sbjct: 75  VVLMGEEMNQYSAIIPRTYILSHCDFTADLTLIISNVINLDQLRGWYSKDDVVVEWKKLE 134

Query: 550 EETCLHVHCHVSGPNVMTD 606
            +  LH HC+VSGPN++ D
Sbjct: 135 GQLALHAHCYVSGPNLLLD 153


>ref|XP_004144252.1| PREDICTED: uncharacterized protein LOC101219336 [Cucumis sativus]
           gi|449517751|ref|XP_004165908.1| PREDICTED:
           uncharacterized protein LOC101229994 [Cucumis sativus]
          Length = 244

 Score =  160 bits (404), Expect = 2e-37
 Identities = 79/126 (62%), Positives = 92/126 (73%)
 Frame = +1

Query: 229 NFLTSTRRPQKVLVCSLAERKVSYNPLVFQAAKLLGPPARFESSKLKVVFMEDEMHKGTG 408
           NF    R    +L  S +    SYN LV +A ++L PPARFE+SKLKVVF   E+ K  G
Sbjct: 18  NFKLVQRNNPALLFSSFSTTPASYNTLVSEAVRILVPPARFEASKLKVVFSR-EVTKSAG 76

Query: 409 IIPRTYALSHCDLTANLTLAISNVINLDQLRGWYNRDDVVAEWNSVNEETCLHVHCHVSG 588
           IIPRTY LSHCD TANLTL IS+VINLDQLRGWYN+DDVVAEW  V +E CLHVHC+VSG
Sbjct: 77  IIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSG 136

Query: 589 PNVMTD 606
           P+ + D
Sbjct: 137 PSSLLD 142


>ref|XP_002520272.1| conserved hypothetical protein [Ricinus communis]
           gi|223540491|gb|EEF42058.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  160 bits (404), Expect = 2e-37
 Identities = 80/140 (57%), Positives = 100/140 (71%), Gaps = 1/140 (0%)
 Frame = +1

Query: 190 SSSPNRSYFISNKNFLTSTRRPQK-VLVCSLAERKVSYNPLVFQAAKLLGPPARFESSKL 366
           S SP R YF  N N     +R +  V++CS+  R  ++N LV +A + L PPARFE+SKL
Sbjct: 9   SLSPCRDYFSINTNNTKFFKRSRPAVVICSITNRSANFNTLVSEAVRHLVPPARFEASKL 68

Query: 367 KVVFMEDEMHKGTGIIPRTYALSHCDLTANLTLAISNVINLDQLRGWYNRDDVVAEWNSV 546
           KVV MED+++    IIPRTY LSHCD TA LTL ISNVINLDQLRGWY++DDVVAEW  +
Sbjct: 69  KVVLMEDQIND---IIPRTYILSHCDFTAELTLTISNVINLDQLRGWYSKDDVVAEWKKL 125

Query: 547 NEETCLHVHCHVSGPNVMTD 606
             +  LH+HC+VSGPN+  D
Sbjct: 126 EGQLALHIHCYVSGPNLALD 145


Top