BLASTX nr result

ID: Coptis24_contig00017485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017485
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285093.1| PREDICTED: 3-hydroxybutyryl-CoA dehydrogenas...   435   e-119
emb|CAN67802.1| hypothetical protein VITISV_020497 [Vitis vinifera]   435   e-119
ref|XP_002329079.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115
ref|XP_002882924.1| hypothetical protein ARALYDRAFT_897803 [Arab...   418   e-114
ref|NP_188147.1| 3-hydroxybutyryl-CoA dehydrogenase [Arabidopsis...   416   e-114

>ref|XP_002285093.1| PREDICTED: 3-hydroxybutyryl-CoA dehydrogenase [Vitis vinifera]
           gi|302142978|emb|CBI20273.3| unnamed protein product
           [Vitis vinifera]
          Length = 296

 Score =  435 bits (1119), Expect = e-119
 Identities = 225/293 (76%), Positives = 247/293 (84%)
 Frame = +1

Query: 103 MAEVKTXXXXXXXXXXXXXAQLAIVAGIDVWLLDSDSNALTNATKSIGNSIQRFVSKGQL 282
           MAEV++             AQLA V G+DVWL D+D+ ALT ATKSI  SIQRFVSKGQL
Sbjct: 1   MAEVRSIGVVGGGQMGSGIAQLAAVHGVDVWLHDTDAEALTRATKSISTSIQRFVSKGQL 60

Query: 283 SQEKAKDALRRLRCTSSLEDLQSADVIIEAIVESEDIKKSLYTDLDRIAKGSAILASNTS 462
           SQE A  AL+RLRCTS+LE+L SADVIIEAIVESED KK L+++LD++AKGSAILASNTS
Sbjct: 61  SQEVATGALQRLRCTSNLEELCSADVIIEAIVESEDAKKKLFSELDKLAKGSAILASNTS 120

Query: 463 SISITRLASATSRSSQVIGMHFFNPPPIMKLLEIVRGGDTSDATFMTVKALAERFGKTVI 642
           SISITRLA ATSR  QVIGMHF NPPPIMKL+EIVRG DTS+ TF   KALAERFGKTVI
Sbjct: 121 SISITRLAFATSRPCQVIGMHFMNPPPIMKLVEIVRGADTSEETFNLTKALAERFGKTVI 180

Query: 643 CSQDYPGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 822
           CSQDY GFI+NR+LMPMINEAFFTLYTGVATK+DIDTGMKLGTNHPMGPLELADFIGLDV
Sbjct: 181 CSQDYSGFIINRVLMPMINEAFFTLYTGVATKKDIDTGMKLGTNHPMGPLELADFIGLDV 240

Query: 823 CLSVMRVLHVGLGDSKYRPCPLLVQYVDAGCLGRKRGIGVYTYGKLPEAKSPS 981
           CLS+M+VLH GLGDSKY PCPLL QYVDAG LGRKRGIGVY Y K+  A + S
Sbjct: 241 CLSIMKVLHAGLGDSKYVPCPLLQQYVDAGRLGRKRGIGVYNYRKVTGATNLS 293


>emb|CAN67802.1| hypothetical protein VITISV_020497 [Vitis vinifera]
          Length = 301

 Score =  435 bits (1118), Expect = e-119
 Identities = 225/294 (76%), Positives = 246/294 (83%)
 Frame = +1

Query: 103 MAEVKTXXXXXXXXXXXXXAQLAIVAGIDVWLLDSDSNALTNATKSIGNSIQRFVSKGQL 282
           MAE ++             AQLA V G++VWL D+D+ ALT ATKSI  SIQRFVSKGQL
Sbjct: 1   MAEXRSIGVVGGGQMGSGIAQLAAVHGVBVWLHDTDAEALTRATKSISTSIQRFVSKGQL 60

Query: 283 SQEKAKDALRRLRCTSSLEDLQSADVIIEAIVESEDIKKSLYTDLDRIAKGSAILASNTS 462
           SQE A  AL+RLRCTS+LE+L SADVIIEAIVESED KK L+++LD++AKGSAILASNTS
Sbjct: 61  SQEVATGALQRLRCTSNLEELCSADVIIEAIVESEDAKKKLFSELDKLAKGSAILASNTS 120

Query: 463 SISITRLASATSRSSQVIGMHFFNPPPIMKLLEIVRGGDTSDATFMTVKALAERFGKTVI 642
           SISITRLA ATSR  QVIGMHF NPPPIMKL+EIVRG DTS+ TF   KALAERFGKTVI
Sbjct: 121 SISITRLAXATSRPXQVIGMHFMNPPPIMKLVEIVRGADTSEETFNLTKALAERFGKTVI 180

Query: 643 CSQDYPGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 822
           CSQDY GFI+NRILMPMINEAFFTLYTGVATK+DIDTGMKLGTNHPMGPLELADFIGLDV
Sbjct: 181 CSQDYSGFIINRILMPMINEAFFTLYTGVATKKDIDTGMKLGTNHPMGPLELADFIGLDV 240

Query: 823 CLSVMRVLHVGLGDSKYRPCPLLVQYVDAGCLGRKRGIGVYTYGKLPEAKSPSR 984
           CLS+M+VLH GLGDSKY PCPLL QYVDAG LGRKRGIGVY Y KL    S S+
Sbjct: 241 CLSIMKVLHAGLGDSKYVPCPLLQQYVDAGRLGRKRGIGVYNYRKLSPMDSNSQ 294


>ref|XP_002329079.1| predicted protein [Populus trichocarpa] gi|222869748|gb|EEF06879.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  419 bits (1077), Expect = e-115
 Identities = 213/295 (72%), Positives = 240/295 (81%)
 Frame = +1

Query: 103 MAEVKTXXXXXXXXXXXXXAQLAIVAGIDVWLLDSDSNALTNATKSIGNSIQRFVSKGQL 282
           M E+K              AQLA V G+DVWLLD+D  AL+ ATKSI ++I R +SKGQL
Sbjct: 1   MTEIKAVGVVGSGQMGSGIAQLAAVHGLDVWLLDTDPAALSRATKSITSNIHRLISKGQL 60

Query: 283 SQEKAKDALRRLRCTSSLEDLQSADVIIEAIVESEDIKKSLYTDLDRIAKGSAILASNTS 462
           SQ    DAL  LRC+S+LE+L+ AD++IEAIVESED KK+L+ +LDRIAK SAILASNTS
Sbjct: 61  SQAAGNDALGHLRCSSNLEELRMADIVIEAIVESEDAKKTLFLELDRIAKSSAILASNTS 120

Query: 463 SISITRLASATSRSSQVIGMHFFNPPPIMKLLEIVRGGDTSDATFMTVKALAERFGKTVI 642
           SISITRLASATSR  QVIGMHF NPPPIMKL+EIVRG DTSD TF   KALAERFGKTVI
Sbjct: 121 SISITRLASATSRPRQVIGMHFMNPPPIMKLVEIVRGADTSDNTFYATKALAERFGKTVI 180

Query: 643 CSQDYPGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 822
           CSQD+ GF+VNRILMPMINEAF+ LYTGVATKEDIDTGMKLGTNHPMGPL+LADFIGLDV
Sbjct: 181 CSQDFSGFVVNRILMPMINEAFYALYTGVATKEDIDTGMKLGTNHPMGPLQLADFIGLDV 240

Query: 823 CLSVMRVLHVGLGDSKYRPCPLLVQYVDAGCLGRKRGIGVYTYGKLPEAKSPSRL 987
           CLS+M+VL  GLGD+KY PCPLLVQ+VDAG LGRKRGIGVY Y    + K  +RL
Sbjct: 241 CLSIMKVLQTGLGDNKYAPCPLLVQFVDAGRLGRKRGIGVYDYRAAEQVKRSARL 295


>ref|XP_002882924.1| hypothetical protein ARALYDRAFT_897803 [Arabidopsis lyrata subsp.
           lyrata] gi|297328764|gb|EFH59183.1| hypothetical protein
           ARALYDRAFT_897803 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score =  418 bits (1075), Expect = e-114
 Identities = 212/292 (72%), Positives = 239/292 (81%)
 Frame = +1

Query: 103 MAEVKTXXXXXXXXXXXXXAQLAIVAGIDVWLLDSDSNALTNATKSIGNSIQRFVSKGQL 282
           MAE+K              AQLA  +G+DVWL+D+D +AL+ AT +I +S++RFVSKG +
Sbjct: 1   MAEMKCVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLI 60

Query: 283 SQEKAKDALRRLRCTSSLEDLQSADVIIEAIVESEDIKKSLYTDLDRIAKGSAILASNTS 462
           S+E   DA+ RLR TS+LEDL SAD+I+EAIVESEDIKK L+ DLD IAK  AILASNTS
Sbjct: 61  SKEIGDDAMHRLRVTSNLEDLSSADIIVEAIVESEDIKKKLFKDLDGIAKSCAILASNTS 120

Query: 463 SISITRLASATSRSSQVIGMHFFNPPPIMKLLEIVRGGDTSDATFMTVKALAERFGKTVI 642
           SISITRLASAT R SQVIGMHF NPPPIMKL+EI+RG DTS+ TF+  KALAERFGKT +
Sbjct: 121 SISITRLASATKRPSQVIGMHFMNPPPIMKLVEIIRGADTSEETFIATKALAERFGKTTV 180

Query: 643 CSQDYPGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 822
           CSQDY GFIVNRILMPMINEAF TLYTGVATKEDID+GMK GTNHPMGPLELAD IGLDV
Sbjct: 181 CSQDYAGFIVNRILMPMINEAFHTLYTGVATKEDIDSGMKHGTNHPMGPLELADLIGLDV 240

Query: 823 CLSVMRVLHVGLGDSKYRPCPLLVQYVDAGCLGRKRGIGVYTYGKLPEAKSP 978
           CLSVM+VLH GLGDSKY PCPLLVQYVDAG LGRKRG+GVY Y K  +  SP
Sbjct: 241 CLSVMKVLHEGLGDSKYAPCPLLVQYVDAGRLGRKRGVGVYDYRKATQKPSP 292


>ref|NP_188147.1| 3-hydroxybutyryl-CoA dehydrogenase [Arabidopsis thaliana]
           gi|9294256|dbj|BAB02158.1| 3-hydroxybutyryl-CoA
           dehydrogenase-like protein [Arabidopsis thaliana]
           gi|23306408|gb|AAN17431.1| putative 3-hydroxybutyryl-CoA
           dehydrogenase [Arabidopsis thaliana]
           gi|24899761|gb|AAN65095.1| putative 3-hydroxybutyryl-CoA
           dehydrogenase [Arabidopsis thaliana]
           gi|332642120|gb|AEE75641.1| 3-hydroxybutyryl-CoA
           dehydrogenase [Arabidopsis thaliana]
          Length = 294

 Score =  416 bits (1070), Expect = e-114
 Identities = 210/292 (71%), Positives = 240/292 (82%)
 Frame = +1

Query: 103 MAEVKTXXXXXXXXXXXXXAQLAIVAGIDVWLLDSDSNALTNATKSIGNSIQRFVSKGQL 282
           MAE+K+             AQLA  +G+DVWL+D+D +AL+ AT +I +S++RFVSKG +
Sbjct: 1   MAEMKSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLI 60

Query: 283 SQEKAKDALRRLRCTSSLEDLQSADVIIEAIVESEDIKKSLYTDLDRIAKGSAILASNTS 462
           S+E   DA+ RLR TS+LEDL SAD+I+EAIVESEDIKK L+ DLD IAK SAILASNTS
Sbjct: 61  SKEVGDDAMHRLRLTSNLEDLCSADIIVEAIVESEDIKKKLFKDLDGIAKSSAILASNTS 120

Query: 463 SISITRLASATSRSSQVIGMHFFNPPPIMKLLEIVRGGDTSDATFMTVKALAERFGKTVI 642
           SISITRLASAT R SQVIGMHF NPPPIMKL+EI+RG DTS+ TF+  K LAERFGKT +
Sbjct: 121 SISITRLASATRRPSQVIGMHFMNPPPIMKLVEIIRGADTSEETFLATKVLAERFGKTTV 180

Query: 643 CSQDYPGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 822
           CSQDY GF+VNRILMPMINEAF TLYTGVATKEDID+GMK GTNHPMGPLELAD IGLDV
Sbjct: 181 CSQDYAGFVVNRILMPMINEAFHTLYTGVATKEDIDSGMKHGTNHPMGPLELADLIGLDV 240

Query: 823 CLSVMRVLHVGLGDSKYRPCPLLVQYVDAGCLGRKRGIGVYTYGKLPEAKSP 978
           CLSVM+VLH GLGDSKY PCPLLVQYVDAG LGRKRG+GVY Y +  +  SP
Sbjct: 241 CLSVMKVLHEGLGDSKYAPCPLLVQYVDAGRLGRKRGVGVYDYREATQKLSP 292


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