BLASTX nr result

ID: Coptis24_contig00017480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017480
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   337   2e-90
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   336   4e-90
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              336   4e-90
emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]   321   1e-85
ref|XP_002269061.2| PREDICTED: glutamate receptor 2.2-like [Viti...   318   1e-84

>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  337 bits (864), Expect = 2e-90
 Identities = 162/305 (53%), Positives = 216/305 (70%), Gaps = 9/305 (2%)
 Frame = -3

Query: 889  TSVFIVHMSAPFGVKFFLKAKDLGMMNEGYVWILTSGLMNVLDILEPTVLDSMQGALGVV 710
            T VFIVHM  P G +FF KA ++GMM EGYVWILT GL ++L  L+P V+DSMQG LG+ 
Sbjct: 224  TRVFIVHMVTPLGSRFFTKADEIGMMEEGYVWILTDGLTDLLSTLDPLVIDSMQGVLGIK 283

Query: 709  PHIARSEKLDNFNTRWKRE------SFIGKEMINFGLWAYDTIWALAMAAERVG--DMKP 554
            PH+ R+++L+NF  RWKR+           E+  FGLWAYD   ALAMA E+VG  ++  
Sbjct: 284  PHVPRTKELENFRVRWKRKFQQDHPKDETSELNIFGLWAYDAASALAMAVEKVGATNLSF 343

Query: 553  NSLRLESDGNFIDVLGVSQTGPKLLEEILKIKFEGLSGEFHLVNGQLQPSAFRILNVVGK 374
                + S+   +D +GVSQ GPKLL+ +L  KF+GLSG+F + +GQL P+AF+I+NV+GK
Sbjct: 344  QKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLSGDFQIFDGQLHPTAFQIVNVIGK 403

Query: 373  GGRDVGFWTSKHGISRDLMNLNSEG-PYSTSAEHFRVIIWPGESTTVPKGWAIPMNGKKL 197
            G R +GFWT K+GI R L   N+    YSTS ++   I+WPGE T  PKGW +P+N KKL
Sbjct: 404  GERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKKL 463

Query: 196  RIGVPVPEGFSELVNVEKDPYTNSTRVSGYCIDLFKSAIESLPYSLPYEFVPFQREDGRS 17
            +IGVPV +GFSE V V  DP TN+T+V+GYCID+F + + SLPY++PYE++PF   DG+ 
Sbjct: 464  KIGVPVKDGFSEFVKVTWDPNTNATKVAGYCIDVFDAVMSSLPYAVPYEYIPFGTPDGKP 523

Query: 16   AGSYN 2
            AG+YN
Sbjct: 524  AGNYN 528


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  336 bits (862), Expect = 4e-90
 Identities = 162/305 (53%), Positives = 216/305 (70%), Gaps = 9/305 (2%)
 Frame = -3

Query: 889  TSVFIVHMSAPFGVKFFLKAKDLGMMNEGYVWILTSGLMNVLDILEPTVLDSMQGALGVV 710
            T VFIVHM  P G +FF KA ++GMM EGYVWILT GL ++L  L+P V+DSMQG LG+ 
Sbjct: 224  TRVFIVHMVTPLGSRFFTKADEIGMMEEGYVWILTDGLTDLLSTLDPLVIDSMQGVLGIK 283

Query: 709  PHIARSEKLDNFNTRWKRE------SFIGKEMINFGLWAYDTIWALAMAAERVG--DMKP 554
            PH+ R+++L+NF  RWKR+           E+  FGLWAYD   ALAMA E+VG  ++  
Sbjct: 284  PHVPRTKELENFRVRWKRKFQQDHPKDETSELNIFGLWAYDAASALAMAVEKVGATNLSF 343

Query: 553  NSLRLESDGNFIDVLGVSQTGPKLLEEILKIKFEGLSGEFHLVNGQLQPSAFRILNVVGK 374
                + S+   +D +GVSQ GPKLL+ +L  KF+GLSG+F + +GQL P+AF+I+NV+GK
Sbjct: 344  QKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLSGDFQIFDGQLHPTAFQIVNVIGK 403

Query: 373  GGRDVGFWTSKHGISRDLMNLNSEG-PYSTSAEHFRVIIWPGESTTVPKGWAIPMNGKKL 197
            G R +GFWT K+GI R L   N+    YSTS ++   I+WPGE T  PKGW +P+N KKL
Sbjct: 404  GERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKKL 463

Query: 196  RIGVPVPEGFSELVNVEKDPYTNSTRVSGYCIDLFKSAIESLPYSLPYEFVPFQREDGRS 17
            +IGVPV +GFSE V V  DP TN+T+V+GYCID+F + + SLPY++PYE++PF   DG+ 
Sbjct: 464  KIGVPVKDGFSEFVKVTWDPNTNATKVTGYCIDVFDAVMGSLPYAVPYEYIPFGTPDGKP 523

Query: 16   AGSYN 2
            AG+YN
Sbjct: 524  AGNYN 528


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  336 bits (862), Expect = 4e-90
 Identities = 162/305 (53%), Positives = 216/305 (70%), Gaps = 9/305 (2%)
 Frame = -3

Query: 889  TSVFIVHMSAPFGVKFFLKAKDLGMMNEGYVWILTSGLMNVLDILEPTVLDSMQGALGVV 710
            T VFIVHM  P G +FF KA ++GMM EGYVWILT GL ++L  L+P V+DSMQG LG+ 
Sbjct: 224  TRVFIVHMVTPLGSRFFTKADEIGMMEEGYVWILTDGLTDLLSTLDPLVIDSMQGVLGIK 283

Query: 709  PHIARSEKLDNFNTRWKRE------SFIGKEMINFGLWAYDTIWALAMAAERVG--DMKP 554
            PH+ R+++L+NF  RWKR+           E+  FGLWAYD   ALAMA E+VG  ++  
Sbjct: 284  PHVPRTKELENFRVRWKRKFQQDHPKDETSELNIFGLWAYDAASALAMAVEKVGATNLSF 343

Query: 553  NSLRLESDGNFIDVLGVSQTGPKLLEEILKIKFEGLSGEFHLVNGQLQPSAFRILNVVGK 374
                + S+   +D +GVSQ GPKLL+ +L  KF+GLSG+F + +GQL P+AF+I+NV+GK
Sbjct: 344  QKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFKGLSGDFQIFDGQLHPTAFQIVNVIGK 403

Query: 373  GGRDVGFWTSKHGISRDLMNLNSEG-PYSTSAEHFRVIIWPGESTTVPKGWAIPMNGKKL 197
            G R +GFWT K+GI R L   N+    YSTS ++   I+WPGE T  PKGW +P+N KKL
Sbjct: 404  GERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDNLGAIVWPGEPTYFPKGWVLPVNEKKL 463

Query: 196  RIGVPVPEGFSELVNVEKDPYTNSTRVSGYCIDLFKSAIESLPYSLPYEFVPFQREDGRS 17
            +IGVPV +GFSE V V  DP TN+T+V+GYCID+F + + SLPY++PYE++PF   DG+ 
Sbjct: 464  KIGVPVKDGFSEFVKVTWDPNTNATKVTGYCIDVFDAVMGSLPYAVPYEYIPFGTPDGKP 523

Query: 16   AGSYN 2
            AG+YN
Sbjct: 524  AGNYN 528


>emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]
          Length = 978

 Score =  321 bits (823), Expect = 1e-85
 Identities = 161/306 (52%), Positives = 211/306 (68%), Gaps = 10/306 (3%)
 Frame = -3

Query: 889  TSVFIVHMSAPFGVKFFLKAKDLGMMNEGYVWILTSGLMNVLDILEPTVLDSMQGALGVV 710
            T VFIVHM  P G +FF KA ++GMM EGYVWILT GL ++L  ++P V+DSMQG LG+ 
Sbjct: 225  TRVFIVHMVTPLGSRFFTKADEIGMMEEGYVWILTDGLTDLLSTMDPLVIDSMQGVLGIK 284

Query: 709  PHIARSEKLDNFNTRWKRE------SFIGKEMINFGLWAYDTIWALAMAAERVG--DMKP 554
            PH+ R+++L+NF  RWKR+           E+  FGLWAYD   ALAMA E+VG  +   
Sbjct: 285  PHVPRTKELENFRVRWKRKFRQDHPKDETSELNIFGLWAYDAASALAMAVEKVGTTNFSF 344

Query: 553  NSLRLESDGNFIDVLGVSQTGPKLLEEILKIKFEGLSGEFHLVNGQLQPSAFRILNVVGK 374
                + S+   +D + VSQ G  LL+ +L  K +GLSG F + +GQL  +AF I+NV+GK
Sbjct: 345  QKTNISSNSMVLDTIRVSQIGTNLLQSLLSTKLKGLSGYFQIFDGQLHSTAFEIVNVIGK 404

Query: 373  GGRDVGFWTSKHGISRDL--MNLNSEGPYSTSAEHFRVIIWPGESTTVPKGWAIPMNGKK 200
            G R VGFWT K+GI R L   + NS+  YSTS ++   I+WPGE T VPKGW +P+N KK
Sbjct: 405  GERGVGFWTPKNGIIRRLNFSHTNSK-TYSTSKDNLGTIVWPGEPTYVPKGWVLPVNEKK 463

Query: 199  LRIGVPVPEGFSELVNVEKDPYTNSTRVSGYCIDLFKSAIESLPYSLPYEFVPFQREDGR 20
            LRIGVPV  GFSE VNV  DP TN++ V+GYCID+F + + SLPY++P+E++PF   DG+
Sbjct: 464  LRIGVPVKNGFSEFVNVTWDPKTNASNVTGYCIDVFDAVMGSLPYAVPHEYIPFGTPDGK 523

Query: 19   SAGSYN 2
            SAGSYN
Sbjct: 524  SAGSYN 529


>ref|XP_002269061.2| PREDICTED: glutamate receptor 2.2-like [Vitis vinifera]
          Length = 832

 Score =  318 bits (814), Expect = 1e-84
 Identities = 155/303 (51%), Positives = 218/303 (71%), Gaps = 8/303 (2%)
 Frame = -3

Query: 889  TSVFIVHMSAPFGVKFFLKAKDLGMMNEGYVWILTSGLMNVLDILEPTVLDSMQGALGVV 710
            T VF+VHMS+    +FFLKAK+LGMM++GY WI+T G+ ++L+ ++P+V+DSMQG +G+ 
Sbjct: 147  TRVFVVHMSSSLASRFFLKAKELGMMSKGYAWIITDGITSILNSMDPSVIDSMQGLIGLR 206

Query: 709  PHIARSEKLDNFNTRWKRE------SFIGKEMINFGLWAYDTIWALAMAAERVGDMKPNS 548
            P+I  SE+L+NF  + K +      S I  E+  F LWAYD +WALA A+E +   K   
Sbjct: 207  PYIPPSEELNNFTVKLKNKFPKDNRSPILNELNIFCLWAYDAVWALARASEEISPRKSQP 266

Query: 547  LRLESDGNFIDV--LGVSQTGPKLLEEILKIKFEGLSGEFHLVNGQLQPSAFRILNVVGK 374
             +L+S   F ++  + VSQTG K+L+ +L+ KF GLSG+F L +GQL+P AF+++NVVG 
Sbjct: 267  EKLKSLSKFTNLASISVSQTGSKILKAVLQSKFNGLSGKFQLKDGQLEPVAFQLVNVVGN 326

Query: 373  GGRDVGFWTSKHGISRDLMNLNSEGPYSTSAEHFRVIIWPGESTTVPKGWAIPMNGKKLR 194
              + +GFWT KHGISR+L NL+    YSTSA   +  IWPG S   PKGW +P++GKKLR
Sbjct: 327  AVKGIGFWTPKHGISREL-NLSDSQLYSTSANGLQPTIWPGLSAVTPKGWTMPVSGKKLR 385

Query: 193  IGVPVPEGFSELVNVEKDPYTNSTRVSGYCIDLFKSAIESLPYSLPYEFVPFQREDGRSA 14
            IGVPV +GF+ELV V++DP T +  VSG+CID+FK+A+E+LPY+L YEF+PF   +G SA
Sbjct: 386  IGVPVKDGFTELVKVDRDPQTGAVSVSGFCIDVFKAAVENLPYALTYEFIPFDNSNGSSA 445

Query: 13   GSY 5
             +Y
Sbjct: 446  LTY 448


Top