BLASTX nr result

ID: Coptis24_contig00017479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017479
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 ...    78   7e-13
ref|XP_002890179.1| hypothetical protein ARALYDRAFT_889058 [Arab...    78   9e-13
ref|XP_002529955.1| protein with unknown function [Ricinus commu...    76   3e-12
gb|AAG10818.1|AC011808_6 Hypothetical protein [Arabidopsis thali...    75   4e-12
ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana] ...    75   4e-12

>ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 homolog [Vitis
           vinifera] gi|296082802|emb|CBI21807.3| unnamed protein
           product [Vitis vinifera]
          Length = 546

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = +2

Query: 224 QGYLAQVLNFQYQLSVVAIDASSHHSTVTSARAARIMKHYAAKMRKS 364
           QGYLAQVL+FQYQLSVVAID+ SHH  VT+ARA RI KHYAA+MRKS
Sbjct: 156 QGYLAQVLSFQYQLSVVAIDSCSHHGNVTNARAERIKKHYAAQMRKS 202


>ref|XP_002890179.1| hypothetical protein ARALYDRAFT_889058 [Arabidopsis lyrata subsp.
           lyrata] gi|297336021|gb|EFH66438.1| hypothetical protein
           ARALYDRAFT_889058 [Arabidopsis lyrata subsp. lyrata]
          Length = 520

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = +2

Query: 224 QGYLAQVLNFQYQLSVVAIDASSHHSTVTSARAARIMKHYAAKMRKS 364
           QGYLAQVL+FQY+ SVVAID+SSHH TVT ARAARI KH+AA+MRKS
Sbjct: 153 QGYLAQVLSFQYKHSVVAIDSSSHHGTVTDARAARIRKHFAAQMRKS 199


>ref|XP_002529955.1| protein with unknown function [Ricinus communis]
           gi|223530553|gb|EEF32432.1| protein with unknown
           function [Ricinus communis]
          Length = 538

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = +2

Query: 224 QGYLAQVLNFQYQLSVVAIDASSHHSTVTSARAARIMKHYAAKMRKS 364
           QGYLAQVL+FQY  SVVAIDASSHH  VT ARA RI KHYAA+MRKS
Sbjct: 150 QGYLAQVLSFQYNHSVVAIDASSHHGKVTDARAERIKKHYAAQMRKS 196


>gb|AAG10818.1|AC011808_6 Hypothetical protein [Arabidopsis thaliana]
          Length = 489

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = +2

Query: 224 QGYLAQVLNFQYQLSVVAIDASSHHSTVTSARAARIMKHYAAKMRKS 364
           QGYLAQVL+FQY+ SVVAID+SSHH  VT ARAARI KH+AA+MRKS
Sbjct: 161 QGYLAQVLSFQYKHSVVAIDSSSHHGKVTDARAARIKKHFAAQMRKS 207


>ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana]
           gi|190016010|gb|ACE62893.1| At1g16650 [Arabidopsis
           thaliana] gi|332191359|gb|AEE29480.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 521

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = +2

Query: 224 QGYLAQVLNFQYQLSVVAIDASSHHSTVTSARAARIMKHYAAKMRKS 364
           QGYLAQVL+FQY+ SVVAID+SSHH  VT ARAARI KH+AA+MRKS
Sbjct: 153 QGYLAQVLSFQYKHSVVAIDSSSHHGKVTDARAARIKKHFAAQMRKS 199


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