BLASTX nr result

ID: Coptis24_contig00017467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017467
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29450.1|TRXF_PEA RecName: Full=Thioredoxin F-type, chloropla...   210   5e-52
ref|XP_002325907.1| thioredoxin f [Populus trichocarpa] gi|11848...   209   6e-52
ref|XP_003624192.1| Thioredoxin [Medicago truncatula] gi|3554992...   208   1e-51
gb|ACJ83989.1| unknown [Medicago truncatula] gi|388514077|gb|AFK...   208   1e-51
ref|XP_002514830.1| thioredoxin f-type, putative [Ricinus commun...   208   2e-51

>sp|P29450.1|TRXF_PEA RecName: Full=Thioredoxin F-type, chloroplastic; Short=Trx-F;
           Flags: Precursor gi|20907|emb|CAA45098.1| thioredoxin F
           [Pisum sativum] gi|1388086|gb|AAC49357.1| thioredoxin f
           [Pisum sativum]
          Length = 182

 Score =  210 bits (534), Expect = 5e-52
 Identities = 100/120 (83%), Positives = 112/120 (93%)
 Frame = -1

Query: 537 VRSSLDMAGPAVVVGQVTQVDKDTFWPLVKAAGDKTVVLDMYTQWCGPCKVIAPKYEELS 358
           VRSSL+ AGP V VG+VT+V+KDTFWP+V AAGDKTVVLDM+T+WCGPCKVIAP YEELS
Sbjct: 61  VRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELS 120

Query: 357 KKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKVVKEVTGAKLDNLVVAIEAVK 178
           +KYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNK+VKEVTGAK D+LV AI+ V+
Sbjct: 121 QKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAIDTVR 180


>ref|XP_002325907.1| thioredoxin f [Populus trichocarpa] gi|118488397|gb|ABK96015.1|
           unknown [Populus trichocarpa]
           gi|222862782|gb|EEF00289.1| thioredoxin f [Populus
           trichocarpa]
          Length = 188

 Score =  209 bits (533), Expect = 6e-52
 Identities = 103/135 (76%), Positives = 115/135 (85%)
 Frame = -1

Query: 582 KRVEKRSRKGYGVGVVRSSLDMAGPAVVVGQVTQVDKDTFWPLVKAAGDKTVVLDMYTQW 403
           K V KR+     V  VRSSLD AGP   VGQVT+V KDTFWP+V +AGDKTVVLDMYTQW
Sbjct: 51  KNVIKRNGSRNLVSTVRSSLDTAGPTSAVGQVTEVTKDTFWPIVNSAGDKTVVLDMYTQW 110

Query: 402 CGPCKVIAPKYEELSKKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKVVKEVT 223
           CGPCK+IAPKY+ELS+KY DVVFLKLDCNQ+NK LAKELGIKVVPTFKILK  K+VKEVT
Sbjct: 111 CGPCKLIAPKYKELSQKYDDVVFLKLDCNQENKPLAKELGIKVVPTFKILKQGKIVKEVT 170

Query: 222 GAKLDNLVVAIEAVK 178
           GAK DNLV+AIE+V+
Sbjct: 171 GAKFDNLVIAIESVR 185


>ref|XP_003624192.1| Thioredoxin [Medicago truncatula] gi|355499207|gb|AES80410.1|
           Thioredoxin [Medicago truncatula]
          Length = 182

 Score =  208 bits (530), Expect = 1e-51
 Identities = 99/120 (82%), Positives = 111/120 (92%)
 Frame = -1

Query: 537 VRSSLDMAGPAVVVGQVTQVDKDTFWPLVKAAGDKTVVLDMYTQWCGPCKVIAPKYEELS 358
           VRSSL+  GP V VGQVT+V+KDTFWP+V AAGDKTVVLDMYTQWCGPCKVIAPKY+EL+
Sbjct: 61  VRSSLETTGPTVTVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVIAPKYKELA 120

Query: 357 KKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKVVKEVTGAKLDNLVVAIEAVK 178
           +KYLDVVFLKLDCNQDNK LAKELGIKVVPTFKILKD+K+VKEVTGAK D+LV AI+ V+
Sbjct: 121 EKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKIVKEVTGAKYDDLVFAIDTVR 180


>gb|ACJ83989.1| unknown [Medicago truncatula] gi|388514077|gb|AFK45100.1| unknown
           [Medicago truncatula]
          Length = 186

 Score =  208 bits (530), Expect = 1e-51
 Identities = 99/120 (82%), Positives = 111/120 (92%)
 Frame = -1

Query: 537 VRSSLDMAGPAVVVGQVTQVDKDTFWPLVKAAGDKTVVLDMYTQWCGPCKVIAPKYEELS 358
           VRSSL+  GP V VGQVT+V+KDTFWP+V AAGDKTVVLDMYTQWCGPCKVIAPKY+EL+
Sbjct: 65  VRSSLETTGPTVTVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVIAPKYKELA 124

Query: 357 KKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKVVKEVTGAKLDNLVVAIEAVK 178
           +KYLDVVFLKLDCNQDNK LAKELGIKVVPTFKILKD+K+VKEVTGAK D+LV AI+ V+
Sbjct: 125 EKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDSKIVKEVTGAKYDDLVFAIDTVR 184


>ref|XP_002514830.1| thioredoxin f-type, putative [Ricinus communis]
           gi|223545881|gb|EEF47384.1| thioredoxin f-type, putative
           [Ricinus communis]
          Length = 186

 Score =  208 bits (529), Expect = 2e-51
 Identities = 97/120 (80%), Positives = 111/120 (92%)
 Frame = -1

Query: 537 VRSSLDMAGPAVVVGQVTQVDKDTFWPLVKAAGDKTVVLDMYTQWCGPCKVIAPKYEELS 358
           V+SSLD  GP   VGQVT+V KDTFWP+VK+AGDKTVVLDMYTQWCGPCK++APK+++LS
Sbjct: 65  VKSSLDTVGPRATVGQVTEVSKDTFWPIVKSAGDKTVVLDMYTQWCGPCKIMAPKFQQLS 124

Query: 357 KKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKVVKEVTGAKLDNLVVAIEAVK 178
           +KYLDVVFLKLDCNQDNK LAKELGI+VVPTFKILKDNKVVKEVTG+K D+LV AIEAV+
Sbjct: 125 EKYLDVVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGSKFDDLVAAIEAVR 184


Top