BLASTX nr result

ID: Coptis24_contig00017458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017458
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   122   1e-47
ref|XP_002282775.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...   121   2e-44
emb|CBI21061.3| unnamed protein product [Vitis vinifera]              121   2e-44
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   120   3e-44
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   120   3e-44

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score =  122 bits (305), Expect(2) = 1e-47
 Identities = 54/101 (53%), Positives = 75/101 (74%)
 Frame = -3

Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
           II DQ +AM  AI +VFP ARHR CLWH+MKK+ +KLG  + YE+IK+ +++AVYDS  I
Sbjct: 634 IITDQDRAMKKAIEDVFPKARHRWCLWHLMKKVPEKLGRHSHYESIKLLLHDAVYDSSSI 693

Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVF 226
            +F++ W KMIE ++L +N WL  L+  R +WVPVY++D F
Sbjct: 694 SDFMEKWKKMIECYELHDNEWLKGLFDERYRWVPVYVRDTF 734



 Score = 93.2 bits (230), Expect(2) = 1e-47
 Identities = 47/75 (62%), Positives = 57/75 (76%)
 Frame = -2

Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
           F+AGMSTTQ SESMN+FFDGYV +KT+LK+FV+QY+ AL DK EKES ADFVSFN+T   
Sbjct: 734 FWAGMSTTQRSESMNSFFDGYVSSKTTLKQFVEQYDNALKDKIEKESMADFVSFNTTIAC 793

Query: 49  KTRCVFERQMANVYT 5
            +   FE Q    +T
Sbjct: 794 ISLFGFESQFQKAFT 808


>ref|XP_002282775.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Vitis vinifera]
          Length = 668

 Score =  121 bits (304), Expect(2) = 2e-44
 Identities = 57/108 (52%), Positives = 74/108 (68%)
 Frame = -3

Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
           II DQ K +  AI  VFP ARH  CLW+IM+++ +KLG L  +E IK  MN AVY+SL+I
Sbjct: 328 IITDQCKPLQNAISEVFPGARHCYCLWYIMQRVPEKLGGLKGFETIKRQMNKAVYESLKI 387

Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVFLQVCLPL 205
            EF  +W  MI++H L +N WL TLY+ R +WVPVYLKD F    +P+
Sbjct: 388 AEFETSWADMIKRHNLGDNKWLQTLYEDRQRWVPVYLKDTFFAGMIPV 435



 Score = 83.2 bits (204), Expect(2) = 2e-44
 Identities = 40/76 (52%), Positives = 54/76 (71%)
 Frame = -2

Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
           FFAGM   Q ++ +NAFFDGY+H  TS KEFVD+Y+ AL  K+ KE+ AD  S  S+  L
Sbjct: 428 FFAGMIPVQENDGLNAFFDGYIHKHTSFKEFVDKYDLALHRKHLKEAMADLESRTSSFEL 487

Query: 49  KTRCVFERQMANVYTR 2
           KT+C FE Q++ +YT+
Sbjct: 488 KTKCNFEVQLSKMYTK 503


>emb|CBI21061.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  121 bits (304), Expect(2) = 2e-44
 Identities = 57/108 (52%), Positives = 74/108 (68%)
 Frame = -3

Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
           II DQ K +  AI  VFP ARH  CLW+IM+++ +KLG L  +E IK  MN AVY+SL+I
Sbjct: 211 IITDQCKPLQNAISEVFPGARHCYCLWYIMQRVPEKLGGLKGFETIKRQMNKAVYESLKI 270

Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVFLQVCLPL 205
            EF  +W  MI++H L +N WL TLY+ R +WVPVYLKD F    +P+
Sbjct: 271 AEFETSWADMIKRHNLGDNKWLQTLYEDRQRWVPVYLKDTFFAGMIPV 318



 Score = 83.2 bits (204), Expect(2) = 2e-44
 Identities = 40/76 (52%), Positives = 54/76 (71%)
 Frame = -2

Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
           FFAGM   Q ++ +NAFFDGY+H  TS KEFVD+Y+ AL  K+ KE+ AD  S  S+  L
Sbjct: 311 FFAGMIPVQENDGLNAFFDGYIHKHTSFKEFVDKYDLALHRKHLKEAMADLESRTSSFEL 370

Query: 49  KTRCVFERQMANVYTR 2
           KT+C FE Q++ +YT+
Sbjct: 371 KTKCNFEVQLSKMYTK 386


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  120 bits (302), Expect(2) = 3e-44
 Identities = 57/101 (56%), Positives = 68/101 (67%)
 Frame = -3

Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
           II DQ +AM  AI+ VFP ARHR CLWHIMKKI +KLG   EYE I   ++N VYDSL  
Sbjct: 305 IITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNR 364

Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVF 226
           ++F   W KMI++  LQ+N WL  LY  R  WVP Y+KD F
Sbjct: 365 DDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTF 405



 Score = 82.8 bits (203), Expect(2) = 3e-44
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = -2

Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
           F+AGMS++Q SES+NAFFDGYV+A+T+LK+FV+QY+ AL DK EKE+++D  SF      
Sbjct: 405 FWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPC 464

Query: 49  KTRCVFERQMANVYT 5
            T   FERQ    YT
Sbjct: 465 ITHYEFERQFQVAYT 479


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score =  120 bits (302), Expect(2) = 3e-44
 Identities = 57/101 (56%), Positives = 68/101 (67%)
 Frame = -3

Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
           II DQ +AM  AI+ VFP ARHR CLWHIMKKI +KLG   EYE I   ++N VYDSL  
Sbjct: 305 IITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNR 364

Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVF 226
           ++F   W KMI++  LQ+N WL  LY  R  WVP Y+KD F
Sbjct: 365 DDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTF 405



 Score = 82.8 bits (203), Expect(2) = 3e-44
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = -2

Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
           F+AGMS++Q SES+NAFFDGYV+A+T+LK+FV+QY+ AL DK EKE+++D  SF      
Sbjct: 405 FWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPC 464

Query: 49  KTRCVFERQMANVYT 5
            T   FERQ    YT
Sbjct: 465 ITHYEFERQFQVAYT 479


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