BLASTX nr result
ID: Coptis24_contig00017458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017458
(530 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [... 122 1e-47
ref|XP_002282775.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l... 121 2e-44
emb|CBI21061.3| unnamed protein product [Vitis vinifera] 121 2e-44
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo... 120 3e-44
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza... 120 3e-44
>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
truncatula]
Length = 1116
Score = 122 bits (305), Expect(2) = 1e-47
Identities = 54/101 (53%), Positives = 75/101 (74%)
Frame = -3
Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
II DQ +AM AI +VFP ARHR CLWH+MKK+ +KLG + YE+IK+ +++AVYDS I
Sbjct: 634 IITDQDRAMKKAIEDVFPKARHRWCLWHLMKKVPEKLGRHSHYESIKLLLHDAVYDSSSI 693
Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVF 226
+F++ W KMIE ++L +N WL L+ R +WVPVY++D F
Sbjct: 694 SDFMEKWKKMIECYELHDNEWLKGLFDERYRWVPVYVRDTF 734
Score = 93.2 bits (230), Expect(2) = 1e-47
Identities = 47/75 (62%), Positives = 57/75 (76%)
Frame = -2
Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
F+AGMSTTQ SESMN+FFDGYV +KT+LK+FV+QY+ AL DK EKES ADFVSFN+T
Sbjct: 734 FWAGMSTTQRSESMNSFFDGYVSSKTTLKQFVEQYDNALKDKIEKESMADFVSFNTTIAC 793
Query: 49 KTRCVFERQMANVYT 5
+ FE Q +T
Sbjct: 794 ISLFGFESQFQKAFT 808
>ref|XP_002282775.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Vitis vinifera]
Length = 668
Score = 121 bits (304), Expect(2) = 2e-44
Identities = 57/108 (52%), Positives = 74/108 (68%)
Frame = -3
Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
II DQ K + AI VFP ARH CLW+IM+++ +KLG L +E IK MN AVY+SL+I
Sbjct: 328 IITDQCKPLQNAISEVFPGARHCYCLWYIMQRVPEKLGGLKGFETIKRQMNKAVYESLKI 387
Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVFLQVCLPL 205
EF +W MI++H L +N WL TLY+ R +WVPVYLKD F +P+
Sbjct: 388 AEFETSWADMIKRHNLGDNKWLQTLYEDRQRWVPVYLKDTFFAGMIPV 435
Score = 83.2 bits (204), Expect(2) = 2e-44
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -2
Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
FFAGM Q ++ +NAFFDGY+H TS KEFVD+Y+ AL K+ KE+ AD S S+ L
Sbjct: 428 FFAGMIPVQENDGLNAFFDGYIHKHTSFKEFVDKYDLALHRKHLKEAMADLESRTSSFEL 487
Query: 49 KTRCVFERQMANVYTR 2
KT+C FE Q++ +YT+
Sbjct: 488 KTKCNFEVQLSKMYTK 503
>emb|CBI21061.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 121 bits (304), Expect(2) = 2e-44
Identities = 57/108 (52%), Positives = 74/108 (68%)
Frame = -3
Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
II DQ K + AI VFP ARH CLW+IM+++ +KLG L +E IK MN AVY+SL+I
Sbjct: 211 IITDQCKPLQNAISEVFPGARHCYCLWYIMQRVPEKLGGLKGFETIKRQMNKAVYESLKI 270
Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVFLQVCLPL 205
EF +W MI++H L +N WL TLY+ R +WVPVYLKD F +P+
Sbjct: 271 AEFETSWADMIKRHNLGDNKWLQTLYEDRQRWVPVYLKDTFFAGMIPV 318
Score = 83.2 bits (204), Expect(2) = 2e-44
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = -2
Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
FFAGM Q ++ +NAFFDGY+H TS KEFVD+Y+ AL K+ KE+ AD S S+ L
Sbjct: 311 FFAGMIPVQENDGLNAFFDGYIHKHTSFKEFVDKYDLALHRKHLKEAMADLESRTSSFEL 370
Query: 49 KTRCVFERQMANVYTR 2
KT+C FE Q++ +YT+
Sbjct: 371 KTKCNFEVQLSKMYTK 386
>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
Length = 965
Score = 120 bits (302), Expect(2) = 3e-44
Identities = 57/101 (56%), Positives = 68/101 (67%)
Frame = -3
Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
II DQ +AM AI+ VFP ARHR CLWHIMKKI +KLG EYE I ++N VYDSL
Sbjct: 305 IITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNR 364
Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVF 226
++F W KMI++ LQ+N WL LY R WVP Y+KD F
Sbjct: 365 DDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTF 405
Score = 82.8 bits (203), Expect(2) = 3e-44
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -2
Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
F+AGMS++Q SES+NAFFDGYV+A+T+LK+FV+QY+ AL DK EKE+++D SF
Sbjct: 405 FWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPC 464
Query: 49 KTRCVFERQMANVYT 5
T FERQ YT
Sbjct: 465 ITHYEFERQFQVAYT 479
>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 862
Score = 120 bits (302), Expect(2) = 3e-44
Identities = 57/101 (56%), Positives = 68/101 (67%)
Frame = -3
Query: 528 IIIDQSKAMAAAIVNVFPNARHRLCLWHIMKKIGDKLGSLTEYEAIKVAMNNAVYDSLRI 349
II DQ +AM AI+ VFP ARHR CLWHIMKKI +KLG EYE I ++N VYDSL
Sbjct: 305 IITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNR 364
Query: 348 EEFVDAWNKMIEQHKLQENVWLDTLYKLRMQWVPVYLKDVF 226
++F W KMI++ LQ+N WL LY R WVP Y+KD F
Sbjct: 365 DDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTF 405
Score = 82.8 bits (203), Expect(2) = 3e-44
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -2
Query: 229 FFAGMSTTQCSESMNAFFDGYVHAKTSLKEFVDQYEAALSDKYEKESQADFVSFNSTPFL 50
F+AGMS++Q SES+NAFFDGYV+A+T+LK+FV+QY+ AL DK EKE+++D SF
Sbjct: 405 FWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPC 464
Query: 49 KTRCVFERQMANVYT 5
T FERQ YT
Sbjct: 465 ITHYEFERQFQVAYT 479