BLASTX nr result

ID: Coptis24_contig00017451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017451
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314792.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
ref|XP_002284889.1| PREDICTED: uncharacterized protein LOC100242...   293   3e-77
ref|XP_002312455.1| predicted protein [Populus trichocarpa] gi|2...   289   6e-76
ref|XP_002525985.1| calcium ion binding protein, putative [Ricin...   286   4e-75
ref|XP_003637676.1| hypothetical protein MTR_097s0019 [Medicago ...   285   1e-74

>ref|XP_002314792.1| predicted protein [Populus trichocarpa] gi|222863832|gb|EEF00963.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  294 bits (753), Expect = 2e-77
 Identities = 134/174 (77%), Positives = 157/174 (90%)
 Frame = +3

Query: 294 DINVLQKHVSFFDRNNDGVIYPWETYQGFRAIGCGMALSTAGAIFINLGLSQKTRPGKFP 473
           D NVLQKHV FFDRN DG++YPWET+QGFR+IGCG+ LSTA A  IN+ LSQKTRPGKFP
Sbjct: 21  DHNVLQKHVFFFDRNQDGIVYPWETFQGFRSIGCGILLSTASAFLINIALSQKTRPGKFP 80

Query: 474 SPLFPIEIKNITRGKHGSDSGVYDAEGRFVPSKFEEIFRKHSHANSNALTSEEVLGMLKA 653
           S LFPIE+KNI R KHGSDSGVYD+EGRFVP+KFEEIF KH+ ++ N+LTS+E++GMLKA
Sbjct: 81  SLLFPIEVKNIQRAKHGSDSGVYDSEGRFVPAKFEEIFSKHARSHPNSLTSDELMGMLKA 140

Query: 654 NRNPKDYGGWLASWTEWKILYLLCKDKDGLLHKETVRAVYDGSLFEQMEKQRAS 815
           NR PKD+ GW+AS+TEWKILY LCKDKDGLLHK+T+RAVYDGSLFE+MEK+RAS
Sbjct: 141 NREPKDFKGWVASYTEWKILYTLCKDKDGLLHKDTIRAVYDGSLFERMEKERAS 194


>ref|XP_002284889.1| PREDICTED: uncharacterized protein LOC100242160 isoform 2 [Vitis
           vinifera] gi|297737641|emb|CBI26842.3| unnamed protein
           product [Vitis vinifera]
          Length = 205

 Score =  293 bits (751), Expect = 3e-77
 Identities = 138/192 (71%), Positives = 160/192 (83%)
 Frame = +3

Query: 252 NNQCKDGTSPMDGGDINVLQKHVSFFDRNNDGVIYPWETYQGFRAIGCGMALSTAGAIFI 431
           ++ C+  ++   GGD++ LQKHV+FFD+N DG +YPWETY+GFRAIGCG+ LS   A  I
Sbjct: 9   SDDCRPISNEGLGGDLSALQKHVAFFDQNKDGTVYPWETYRGFRAIGCGIFLSAGSAFLI 68

Query: 432 NLGLSQKTRPGKFPSPLFPIEIKNITRGKHGSDSGVYDAEGRFVPSKFEEIFRKHSHANS 611
           NL LS+KTRPGKFPS L PIEIKNI   KHGSDSGVYD+EGRFVPSKFEEIF KH+ ANS
Sbjct: 69  NLALSRKTRPGKFPSLLLPIEIKNIHMAKHGSDSGVYDSEGRFVPSKFEEIFTKHAGANS 128

Query: 612 NALTSEEVLGMLKANRNPKDYGGWLASWTEWKILYLLCKDKDGLLHKETVRAVYDGSLFE 791
           NALTS+E+L MLK NR PKDY GWLASWTEWKILY LCKDK+GLLHKET+RAVYDGSLFE
Sbjct: 129 NALTSDELLAMLKYNRVPKDYSGWLASWTEWKILYFLCKDKNGLLHKETIRAVYDGSLFE 188

Query: 792 QMEKQRASVH*K 827
           +M++ RAS   K
Sbjct: 189 RMQEHRASARKK 200


>ref|XP_002312455.1| predicted protein [Populus trichocarpa] gi|222852275|gb|EEE89822.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  289 bits (740), Expect = 6e-76
 Identities = 131/174 (75%), Positives = 155/174 (89%)
 Frame = +3

Query: 294 DINVLQKHVSFFDRNNDGVIYPWETYQGFRAIGCGMALSTAGAIFINLGLSQKTRPGKFP 473
           D NVLQKHV FFDRN DG++YPWET+QGFRAIGCG+ LSTA A+ IN+ LSQKTRPGKFP
Sbjct: 21  DHNVLQKHVFFFDRNQDGIVYPWETFQGFRAIGCGILLSTASALLINIALSQKTRPGKFP 80

Query: 474 SPLFPIEIKNITRGKHGSDSGVYDAEGRFVPSKFEEIFRKHSHANSNALTSEEVLGMLKA 653
           SPLFPIE+KNI R KHGSDSGVYD+EGRFVP KFEEIF KH+ ++ N+LT++E++GMLKA
Sbjct: 81  SPLFPIEVKNIHRTKHGSDSGVYDSEGRFVPGKFEEIFSKHARSHPNSLTADELMGMLKA 140

Query: 654 NRNPKDYGGWLASWTEWKILYLLCKDKDGLLHKETVRAVYDGSLFEQMEKQRAS 815
           NR PKD+ GW+AS+TEWKILY LCKDK+GLLH++T+RA YDGSLFE MEK+R S
Sbjct: 141 NREPKDFRGWVASYTEWKILYDLCKDKNGLLHEDTIRAAYDGSLFEHMEKERTS 194


>ref|XP_002525985.1| calcium ion binding protein, putative [Ricinus communis]
           gi|223534717|gb|EEF36409.1| calcium ion binding protein,
           putative [Ricinus communis]
          Length = 198

 Score =  286 bits (733), Expect = 4e-75
 Identities = 133/172 (77%), Positives = 151/172 (87%)
 Frame = +3

Query: 300 NVLQKHVSFFDRNNDGVIYPWETYQGFRAIGCGMALSTAGAIFINLGLSQKTRPGKFPSP 479
           NVLQKHV FFDRN DG++YPWET+QGFRAIGCG+ LSTA AIFIN GLSQKTRPGKFPS 
Sbjct: 22  NVLQKHVFFFDRNKDGLVYPWETFQGFRAIGCGILLSTASAIFINAGLSQKTRPGKFPSL 81

Query: 480 LFPIEIKNITRGKHGSDSGVYDAEGRFVPSKFEEIFRKHSHANSNALTSEEVLGMLKANR 659
           LFPIE+KNI R KHGSDSGVYD EGRFVP KFEEIFRKH+ ++ +ALTSEE+  MLKANR
Sbjct: 82  LFPIEVKNIQRSKHGSDSGVYDTEGRFVPEKFEEIFRKHAQSHPHALTSEELKEMLKANR 141

Query: 660 NPKDYGGWLASWTEWKILYLLCKDKDGLLHKETVRAVYDGSLFEQMEKQRAS 815
            PKDY GWLAS+ EW+ LY LCKDKDGLLH++TVRAVYDGSLF+ +EK++ S
Sbjct: 142 EPKDYAGWLASFAEWRTLYSLCKDKDGLLHEDTVRAVYDGSLFDHLEKEKES 193


>ref|XP_003637676.1| hypothetical protein MTR_097s0019 [Medicago truncatula]
           gi|355503611|gb|AES84814.1| hypothetical protein
           MTR_097s0019 [Medicago truncatula]
           gi|388493300|gb|AFK34716.1| unknown [Medicago
           truncatula]
          Length = 197

 Score =  285 bits (729), Expect = 1e-74
 Identities = 130/173 (75%), Positives = 154/173 (89%)
 Frame = +3

Query: 294 DINVLQKHVSFFDRNNDGVIYPWETYQGFRAIGCGMALSTAGAIFINLGLSQKTRPGKFP 473
           D NVLQKHV+FFDRN+DG++YPWET+QGFRAIGCG+ LS+  AIFIN GLSQKTRPGKFP
Sbjct: 19  DQNVLQKHVAFFDRNHDGIVYPWETFQGFRAIGCGIILSSFAAIFINFGLSQKTRPGKFP 78

Query: 474 SPLFPIEIKNITRGKHGSDSGVYDAEGRFVPSKFEEIFRKHSHANSNALTSEEVLGMLKA 653
           S   P+EIKNIT+ KHGSDSGVYD EGRFVPS FEEIF KH+  + +ALTS+E++G+LKA
Sbjct: 79  SIFLPVEIKNITKAKHGSDSGVYDNEGRFVPSIFEEIFSKHARKHPSALTSDELMGLLKA 138

Query: 654 NRNPKDYGGWLASWTEWKILYLLCKDKDGLLHKETVRAVYDGSLFEQMEKQRA 812
           NR PKDY GWLAS++EWKIL++LCKDKDGLLHKET+R VYDGSLFE+MEK+ +
Sbjct: 139 NREPKDYKGWLASYSEWKILHVLCKDKDGLLHKETIRGVYDGSLFERMEKEHS 191


Top