BLASTX nr result
ID: Coptis24_contig00017447
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017447 (476 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus commun... 153 1e-45 emb|CBI21621.3| unnamed protein product [Vitis vinifera] 150 7e-45 ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplas... 150 8e-45 ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|2... 149 7e-44 ref|XP_002438045.1| hypothetical protein SORBIDRAFT_10g007230 [S... 149 6e-43 >ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus communis] gi|223532582|gb|EEF34369.1| NADH dehydrogenase, putative [Ricinus communis] Length = 536 Score = 153 bits (386), Expect(2) = 1e-45 Identities = 71/76 (93%), Positives = 76/76 (100%) Frame = +2 Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427 ETDETLRVKGHPR+FA+GDS+ALRDS+GR+LPATAQVAFQQADFAGWNLWAAINDRPLLP Sbjct: 395 ETDETLRVKGHPRIFALGDSSALRDSSGRLLPATAQVAFQQADFAGWNLWAAINDRPLLP 454 Query: 428 FRFQNLGEMMTLGRND 475 FRFQNLGEMMTLGRND Sbjct: 455 FRFQNLGEMMTLGRND 470 Score = 55.1 bits (131), Expect(2) = 1e-45 Identities = 26/41 (63%), Positives = 33/41 (80%) Frame = +1 Query: 34 ERNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156 + + +I SE + + LELQPAERGL+SQILE+DLVLWTVG Sbjct: 329 DASENIASEHSSEKYFLELQPAERGLQSQILEADLVLWTVG 369 >emb|CBI21621.3| unnamed protein product [Vitis vinifera] Length = 526 Score = 150 bits (379), Expect(2) = 7e-45 Identities = 69/76 (90%), Positives = 75/76 (98%) Frame = +2 Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427 ETDETLRVKGHPR+FA+GDS++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLP Sbjct: 385 ETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLP 444 Query: 428 FRFQNLGEMMTLGRND 475 FRFQNLGEMMTLGRND Sbjct: 445 FRFQNLGEMMTLGRND 460 Score = 55.5 bits (132), Expect(2) = 7e-45 Identities = 25/35 (71%), Positives = 31/35 (88%) Frame = +1 Query: 52 VSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156 +SE +L+LELQPAERGL+SQILE+DL+LWTVG Sbjct: 325 ISEHEPEKLILELQPAERGLQSQILEADLILWTVG 359 >ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like [Vitis vinifera] Length = 543 Score = 150 bits (379), Expect(2) = 8e-45 Identities = 69/76 (90%), Positives = 75/76 (98%) Frame = +2 Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427 ETDETLRVKGHPR+FA+GDS++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLP Sbjct: 402 ETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLP 461 Query: 428 FRFQNLGEMMTLGRND 475 FRFQNLGEMMTLGRND Sbjct: 462 FRFQNLGEMMTLGRND 477 Score = 55.1 bits (131), Expect(2) = 8e-45 Identities = 25/37 (67%), Positives = 31/37 (83%) Frame = +1 Query: 46 DIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156 D +E +L+LELQPAERGL+SQILE+DL+LWTVG Sbjct: 340 DAAAEHEPEKLILELQPAERGLQSQILEADLILWTVG 376 >ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|222852852|gb|EEE90399.1| predicted protein [Populus trichocarpa] Length = 553 Score = 149 bits (376), Expect(2) = 7e-44 Identities = 70/76 (92%), Positives = 73/76 (96%) Frame = +2 Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427 ETDETLRVKGHPR+FA+GDS+ALRD GRILPATAQVAFQQADF GWNLWAAINDRPLLP Sbjct: 412 ETDETLRVKGHPRIFALGDSSALRDMNGRILPATAQVAFQQADFTGWNLWAAINDRPLLP 471 Query: 428 FRFQNLGEMMTLGRND 475 FRFQNLGEMMTLGRND Sbjct: 472 FRFQNLGEMMTLGRND 487 Score = 53.1 bits (126), Expect(2) = 7e-44 Identities = 25/40 (62%), Positives = 30/40 (75%) Frame = +1 Query: 37 RNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156 R + E + +LELQPAERGL+SQILE+DLVLWTVG Sbjct: 347 RKESDLEEHGSEKYILELQPAERGLQSQILEADLVLWTVG 386 >ref|XP_002438045.1| hypothetical protein SORBIDRAFT_10g007230 [Sorghum bicolor] gi|241916268|gb|EER89412.1| hypothetical protein SORBIDRAFT_10g007230 [Sorghum bicolor] Length = 545 Score = 149 bits (376), Expect(2) = 6e-43 Identities = 70/76 (92%), Positives = 74/76 (97%) Frame = +2 Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427 ETDETL+VKGHPR FAIGDSAALRD +G++LPATAQVAFQQADFAGWNLWAAINDRPLLP Sbjct: 404 ETDETLQVKGHPRTFAIGDSAALRDPSGKLLPATAQVAFQQADFAGWNLWAAINDRPLLP 463 Query: 428 FRFQNLGEMMTLGRND 475 FRFQNLGEMMTLGRND Sbjct: 464 FRFQNLGEMMTLGRND 479 Score = 50.1 bits (118), Expect(2) = 6e-43 Identities = 22/30 (73%), Positives = 27/30 (90%) Frame = +1 Query: 67 HTELVLELQPAERGLKSQILESDLVLWTVG 156 + +L+L+LQPAERGLK Q LE+DLVLWTVG Sbjct: 349 YRKLILDLQPAERGLKGQTLEADLVLWTVG 378