BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017447
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus commun...   153   1e-45
emb|CBI21621.3| unnamed protein product [Vitis vinifera]              150   7e-45
ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplas...   150   8e-45
ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|2...   149   7e-44
ref|XP_002438045.1| hypothetical protein SORBIDRAFT_10g007230 [S...   149   6e-43

>ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223532582|gb|EEF34369.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 536

 Score =  153 bits (386), Expect(2) = 1e-45
 Identities = 71/76 (93%), Positives = 76/76 (100%)
 Frame = +2

Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427
           ETDETLRVKGHPR+FA+GDS+ALRDS+GR+LPATAQVAFQQADFAGWNLWAAINDRPLLP
Sbjct: 395 ETDETLRVKGHPRIFALGDSSALRDSSGRLLPATAQVAFQQADFAGWNLWAAINDRPLLP 454

Query: 428 FRFQNLGEMMTLGRND 475
           FRFQNLGEMMTLGRND
Sbjct: 455 FRFQNLGEMMTLGRND 470



 Score = 55.1 bits (131), Expect(2) = 1e-45
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +1

Query: 34  ERNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156
           + + +I SE +  +  LELQPAERGL+SQILE+DLVLWTVG
Sbjct: 329 DASENIASEHSSEKYFLELQPAERGLQSQILEADLVLWTVG 369


>emb|CBI21621.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  150 bits (379), Expect(2) = 7e-45
 Identities = 69/76 (90%), Positives = 75/76 (98%)
 Frame = +2

Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427
           ETDETLRVKGHPR+FA+GDS++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLP
Sbjct: 385 ETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLP 444

Query: 428 FRFQNLGEMMTLGRND 475
           FRFQNLGEMMTLGRND
Sbjct: 445 FRFQNLGEMMTLGRND 460



 Score = 55.5 bits (132), Expect(2) = 7e-45
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +1

Query: 52  VSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156
           +SE    +L+LELQPAERGL+SQILE+DL+LWTVG
Sbjct: 325 ISEHEPEKLILELQPAERGLQSQILEADLILWTVG 359


>ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 543

 Score =  150 bits (379), Expect(2) = 8e-45
 Identities = 69/76 (90%), Positives = 75/76 (98%)
 Frame = +2

Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427
           ETDETLRVKGHPR+FA+GDS++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLP
Sbjct: 402 ETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLP 461

Query: 428 FRFQNLGEMMTLGRND 475
           FRFQNLGEMMTLGRND
Sbjct: 462 FRFQNLGEMMTLGRND 477



 Score = 55.1 bits (131), Expect(2) = 8e-45
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +1

Query: 46  DIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156
           D  +E    +L+LELQPAERGL+SQILE+DL+LWTVG
Sbjct: 340 DAAAEHEPEKLILELQPAERGLQSQILEADLILWTVG 376


>ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|222852852|gb|EEE90399.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  149 bits (376), Expect(2) = 7e-44
 Identities = 70/76 (92%), Positives = 73/76 (96%)
 Frame = +2

Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427
           ETDETLRVKGHPR+FA+GDS+ALRD  GRILPATAQVAFQQADF GWNLWAAINDRPLLP
Sbjct: 412 ETDETLRVKGHPRIFALGDSSALRDMNGRILPATAQVAFQQADFTGWNLWAAINDRPLLP 471

Query: 428 FRFQNLGEMMTLGRND 475
           FRFQNLGEMMTLGRND
Sbjct: 472 FRFQNLGEMMTLGRND 487



 Score = 53.1 bits (126), Expect(2) = 7e-44
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = +1

Query: 37  RNNDIVSEQAHTELVLELQPAERGLKSQILESDLVLWTVG 156
           R    + E    + +LELQPAERGL+SQILE+DLVLWTVG
Sbjct: 347 RKESDLEEHGSEKYILELQPAERGLQSQILEADLVLWTVG 386


>ref|XP_002438045.1| hypothetical protein SORBIDRAFT_10g007230 [Sorghum bicolor]
           gi|241916268|gb|EER89412.1| hypothetical protein
           SORBIDRAFT_10g007230 [Sorghum bicolor]
          Length = 545

 Score =  149 bits (376), Expect(2) = 6e-43
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +2

Query: 248 ETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLP 427
           ETDETL+VKGHPR FAIGDSAALRD +G++LPATAQVAFQQADFAGWNLWAAINDRPLLP
Sbjct: 404 ETDETLQVKGHPRTFAIGDSAALRDPSGKLLPATAQVAFQQADFAGWNLWAAINDRPLLP 463

Query: 428 FRFQNLGEMMTLGRND 475
           FRFQNLGEMMTLGRND
Sbjct: 464 FRFQNLGEMMTLGRND 479



 Score = 50.1 bits (118), Expect(2) = 6e-43
 Identities = 22/30 (73%), Positives = 27/30 (90%)
 Frame = +1

Query: 67  HTELVLELQPAERGLKSQILESDLVLWTVG 156
           + +L+L+LQPAERGLK Q LE+DLVLWTVG
Sbjct: 349 YRKLILDLQPAERGLKGQTLEADLVLWTVG 378