BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017438
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]   379   e-103
emb|CBI16436.3| unnamed protein product [Vitis vinifera]              367   2e-99
ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containi...   357   2e-96
ref|XP_003619639.1| Pentatricopeptide repeat-containing protein ...   348   1e-93

>ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 624

 Score =  379 bits (972), Expect = e-103
 Identities = 177/227 (77%), Positives = 201/227 (88%)
 Frame = -1

Query: 1070 LGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISELDPSNVGCN 891
            LGR+G LKEAE+ +  MP+APDA IWGALLGACRIH+D E G+RIGKII ELD  ++GC+
Sbjct: 398  LGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCH 457

Query: 890  VLLANMYSASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRSHPQTEQIY 711
            VLLAN+YSASG+W EAK +R+K+E+ G KKTPGC+SIELNG+ HQFLVGDRSHPQT+Q+Y
Sbjct: 458  VLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLY 517

Query: 710  SFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINTAPGTPIRI 531
             FLDEMT KLK AGYVPE GEVLLDI DEEDKETALS+HSEKLAIAFGLINT PGT IRI
Sbjct: 518  LFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRI 577

Query: 530  MKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 390
            +KNLRVC DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 578  VKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624


>emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score =  379 bits (972), Expect = e-103
 Identities = 177/227 (77%), Positives = 201/227 (88%)
 Frame = -1

Query: 1070 LGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISELDPSNVGCN 891
            LGR+G LKEAE+ +  MP+APDA IWGALLGACRIH+D E G+RIGKII ELD  ++GC+
Sbjct: 313  LGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCH 372

Query: 890  VLLANMYSASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRSHPQTEQIY 711
            VLLAN+YSASG+W EAK +R+K+E+ G KKTPGC+SIELNG+ HQFLVGDRSHPQT+Q+Y
Sbjct: 373  VLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLY 432

Query: 710  SFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINTAPGTPIRI 531
             FLDEMT KLK AGYVPE GEVLLDI DEEDKETALS+HSEKLAIAFGLINT PGT IRI
Sbjct: 433  LFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRI 492

Query: 530  MKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 390
            +KNLRVC DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 493  VKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539


>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  367 bits (943), Expect = 2e-99
 Identities = 171/220 (77%), Positives = 195/220 (88%)
 Frame = -1

Query: 1049 KEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISELDPSNVGCNVLLANMY 870
            +EAE+ +  MP+APDA IWGALLGACRIH+D E G+RIGKII ELD  ++GC+VLLAN+Y
Sbjct: 326  REAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLY 385

Query: 869  SASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRSHPQTEQIYSFLDEMT 690
            SASG+W EAK +R+K+E+ G KKTPGC+SIELNG+ HQFLVGDRSHPQT+Q+Y FLDEMT
Sbjct: 386  SASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMT 445

Query: 689  VKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINTAPGTPIRIMKNLRVC 510
             KLK AGYVPE GEVLLDI DEEDKETALS+HSEKLAIAFGLINT PGT IRI+KNLRVC
Sbjct: 446  TKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVC 505

Query: 509  CDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 390
             DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 506  ADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 545


>ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus] gi|449516005|ref|XP_004165038.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g66520-like [Cucumis sativus]
          Length = 609

 Score =  357 bits (917), Expect = 2e-96
 Identities = 166/227 (73%), Positives = 194/227 (85%)
 Frame = -1

Query: 1070 LGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISELDPSNVGCN 891
            LGRAG LKEAE++I +M + PD  IWGALL AC+IH+D EMGER+GKI+ ELDP+++GC+
Sbjct: 383  LGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCH 442

Query: 890  VLLANMYSASGRWTEAKVLREKVELGGVKKTPGCTSIELNGMVHQFLVGDRSHPQTEQIY 711
            VLLAN+YS +G W EA+ LREK+   G KKTPGC+SIELNGM HQFLVGDRSHPQT+Q+Y
Sbjct: 443  VLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLY 502

Query: 710  SFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINTAPGTPIRI 531
             FLDEM  KLKIAGY+PE GEVLLDI D ED+ETAL +HSEKLAIAFGL+NT P TPIRI
Sbjct: 503  LFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRI 562

Query: 530  MKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 390
            +KNLRVC DCH A KFISKVY+REIIVRDR+R+HH +DG CSC DYW
Sbjct: 563  VKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609


>ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494654|gb|AES75857.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1182

 Score =  348 bits (893), Expect = 1e-93
 Identities = 166/227 (73%), Positives = 197/227 (86%), Gaps = 1/227 (0%)
 Frame = -1

Query: 1070 LGRAGFLKEAEDMILTMPVAPDAIIWGALLGACRIHRDTEMGERIGKIISELDPSNVGCN 891
            L R+G LK++E+MIL+MP+APD  IWGALL ACRI++D E G RIG+II E+DP+++GCN
Sbjct: 558  LSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCN 617

Query: 890  VLLANMYSASGRWTEAKVLREKVELGGV-KKTPGCTSIELNGMVHQFLVGDRSHPQTEQI 714
            VLL N+YS SGRW EA+++REK E+    KK PG +SIELNG+ H+FLVGDRSHPQ+ +I
Sbjct: 618  VLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREI 677

Query: 713  YSFLDEMTVKLKIAGYVPEIGEVLLDISDEEDKETALSRHSEKLAIAFGLINTAPGTPIR 534
            YSFLDEM  KLKIAGYVPE+GEVLLD  DEEDKETALS HSEKLAIAFGL+NTAPGTPIR
Sbjct: 678  YSFLDEMISKLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIR 737

Query: 533  IMKNLRVCCDCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDY 393
            I+KNLRVC DCH+ATKFISKVY+R IIVRDR+R+HH +DG CSCKDY
Sbjct: 738  IVKNLRVCGDCHQATKFISKVYDRVIIVRDRMRYHHFKDGICSCKDY 784