BLASTX nr result

ID: Coptis24_contig00017434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017434
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo]      392   e-106
ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   387   e-105
ref|XP_003528115.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   386   e-105
ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]...   385   e-105
ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222...   384   e-104

>gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo]
          Length = 1055

 Score =  392 bits (1006), Expect = e-106
 Identities = 209/380 (55%), Positives = 273/380 (71%), Gaps = 1/380 (0%)
 Frame = -2

Query: 1142 TIDSRSGFCSTTKIFHSLRPPVHLPPTNIPLSATQYTFALLTKTPSFSPDNTIAFIDYSS 963
            +ID RSGFC  TKIFHSLRPP+ LPP + PLS TQ+ F+LL    S  P N+   ID +S
Sbjct: 500  SIDLRSGFCPLTKIFHSLRPPLSLPPLSQPLSVTQHAFSLLQS--SSPPPNSTLLIDSNS 557

Query: 962  GTHLLYSDFLGQVESLAISLRTQFLLEKGDVAFVLSPTSLQIPILYLALLSIGVIVSPAN 783
            G HL Y+ FL Q+ +LA +L++   L  G VAF+L+PTSLQIP+LY ALLS+GV++SPAN
Sbjct: 558  GLHLSYAIFLRQIRNLASNLKSLTSLCNGHVAFILAPTSLQIPVLYFALLSLGVVLSPAN 617

Query: 782  PTSTLSELSRQISLTKPVIAFATSATANKLPSLRHETILLDSSRFFSMLTTQKLDQVELP 603
            PTS++SE+S QI L+KPVIAFATS+TA+KLP+LR  T+++DS  F SML T+      L 
Sbjct: 618  PTSSVSEISHQIQLSKPVIAFATSSTASKLPTLRFGTVIIDSPHFLSML-TETNGSDGLT 676

Query: 602  AVVVQQNDTAVILYSSGTTGQVKGVEMTHRTFIAFLAAQHSMIQAESIKKKAPHEVGLFT 423
             + + Q+D+A ILYSSGTTG+VKGV ++HR  IA  +   +        +  PH V L  
Sbjct: 677  DIKIDQSDSAAILYSSGTTGRVKGVLLSHRNLIAVNSGPTAFQSEIHEGEMKPHPVALCL 736

Query: 422  VPLFHIYGFYVSIRAVAMGETAILMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAKLAL 243
            +PLFH++GF + +RA++ GET +LM RF+FEGML+AVE  +V Y+P SPPLVVA AK  L
Sbjct: 737  LPLFHVFGFVMLVRAISRGETLVLMERFEFEGMLRAVEKFRVIYIPVSPPLVVAMAKSDL 796

Query: 242  VEKYNLSSLLMVECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEA-AGVATMLGPDETKK 66
            V KY+LSSL ++ CGGAPLGKEV  KF  + P ++I QGYGLTE+ AG A  + P+E   
Sbjct: 797  VAKYDLSSLQILGCGGAPLGKEVIDKFHQKLPSVEIAQGYGLTESTAGAARTMEPEEISN 856

Query: 65   FGSVGRLSQNIEAKIIDPRS 6
              SVGRLS ++EAKI+DP S
Sbjct: 857  TKSVGRLSGSMEAKIVDPAS 876



 Score =  383 bits (984), Expect = e-104
 Identities = 197/386 (51%), Positives = 271/386 (70%), Gaps = 4/386 (1%)
 Frame = -2

Query: 1151 STSTIDSRSGFCSTTKIFHSLRPPVHLPPTNIPLSATQYTFALLTKTPSFSPDNTIAFID 972
            +T ++DSRSGFCS TKI+ SLRPP+ LPP + PL+   +  ++L  +P   P NT A ID
Sbjct: 2    ATHSVDSRSGFCSQTKIYKSLRPPLSLPPLSQPLTVAGHALSVLRSSPP--PPNTAALID 59

Query: 971  YSSGTHLLYSDFLGQVESLAISLRTQFLLEKGDVAFVLSPTSLQIPILYLALLSIGVIVS 792
              SG  + Y+ FL Q+ +L  +L+  +    G VAF+LSPTSLQIP+LY ALLS+GV+VS
Sbjct: 60   SDSGVSVSYALFLRQIRNLTSNLKALYSFSNGQVAFILSPTSLQIPVLYFALLSLGVVVS 119

Query: 791  PANPTSTLSELSRQISLTKPVIAFATSATANKLPSLRHETILLDSSRFFSMLTTQKLDQV 612
            PANP S+ SE++ Q+SL KPVIAFA S+TA+K+P L   T+L+DS  F S++      + 
Sbjct: 120  PANPISSESEIAHQVSLCKPVIAFAISSTASKIPRLPLGTVLIDSPEFLSLMNESNRSEG 179

Query: 611  ELPAVV---VQQNDTAVILYSSGTTGQVKGVEMTHRTFIAFLAAQHSMIQAESIKKKAPH 441
                +    + QND+A ILYSSGTTG+VKGV ++HR  I  +     + +     +  PH
Sbjct: 180  VNDGIFDLKINQNDSAAILYSSGTTGRVKGVLLSHRNLITAITGVQVLDKTPVDGEIEPH 239

Query: 440  EVGLFTVPLFHIYGFYVSIRAVAMGETAILMGRFDFEGMLKAVETHQVTYMPASPPLVVA 261
             V L  +PLFH++GF++  R+++ G T +LM +FDFE ML+AVE ++VTY+P SPPLV+A
Sbjct: 240  PVALSLLPLFHVFGFFMLFRSISEGNTLVLMRKFDFEKMLRAVEKYRVTYIPVSPPLVLA 299

Query: 260  FAKLALVEKYNLSSLLMVECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEAAGVAT-MLG 84
             AK  L EKY+LSSL ++ CGGAPLGKEV  KF  +FP+++I+QGYGLTE+AG A+  +G
Sbjct: 300  MAKSELAEKYDLSSLQILGCGGAPLGKEVIDKFHVKFPNVEIIQGYGLTESAGAASRTVG 359

Query: 83   PDETKKFGSVGRLSQNIEAKIIDPRS 6
            P+E  K  SVGRLS+N+EAKI+DP S
Sbjct: 360  PEECSKASSVGRLSENMEAKIVDPSS 385


>ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 580

 Score =  387 bits (994), Expect = e-105
 Identities = 206/382 (53%), Positives = 270/382 (70%), Gaps = 4/382 (1%)
 Frame = -2

Query: 1145 STIDSRSGFCSTTKIFHSLRPPVHLPPTNIPLSATQYTFALLTKTPSFSPDNTIAFIDYS 966
            +TID  SGFCS ++ FH+LRP V LPP + PLS T Y F+LL    +     T A ID +
Sbjct: 36   TTIDPNSGFCSHSRTFHTLRPNVPLPPPSHPLSLTDYAFSLLPAAAT----TTSALIDAA 91

Query: 965  SGTHLLYSDFLGQVESLAISLRTQFLLEKGDVAFVLSPTSLQIPILYLALLSIGVIVSPA 786
            +  HL YS  L QV+SLA SL++   L KG VA +L+P+SL +P+LY +LLS+GV ++PA
Sbjct: 92   TDRHLSYSLLLRQVQSLASSLQSLTPLSKGHVALILTPSSLHVPVLYFSLLSLGVTIAPA 151

Query: 785  NPTSTLSELSRQISLTKPVIAFATSATANKLPSLRHETILLDSSRFFSMLT---TQKLDQ 615
            NP S+LSEL+  + L KP IAF+TS  A  +PSL+  TILLDS  F SML    T   D 
Sbjct: 152  NPLSSLSELTHIVKLAKPAIAFSTSNAAKNIPSLKFGTILLDSPFFLSMLDDDETVNRDS 211

Query: 614  VELPAVVVQQNDTAVILYSSGTTGQVKGVEMTHRTFIAFLAAQHSMIQAESIKKKAPHEV 435
                   V Q+D+A IL+SSGTTG+VKGV +THR FI  +   + +    ++    PH V
Sbjct: 212  RAHRVEEVSQSDSAAILFSSGTTGRVKGVLLTHRNFITLIGGFYHL---RNVADGDPHPV 268

Query: 434  GLFTVPLFHIYGFYVSIRAVAMGETAILMGRFDFEGMLKAVETHQVTYMPASPPLVVAFA 255
             LFT+PLFH++GF++ +RA+A+GET + M RFDFEGMLKAVE + +TYMP SPPLVVA A
Sbjct: 269  SLFTLPLFHVFGFFMLVRAIAVGETLVFMQRFDFEGMLKAVERYGITYMPVSPPLVVALA 328

Query: 254  KLALVEKYNLSSLLMVECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEA-AGVATMLGPD 78
            K  LV+KY+LSSL  + CGGAPLGKEV+  F  +FP+++I QGYGLTE+  G A +LGPD
Sbjct: 329  KSELVKKYDLSSLRYLGCGGAPLGKEVADDFRGKFPNVEIGQGYGLTESGGGAARVLGPD 388

Query: 77   ETKKFGSVGRLSQNIEAKIIDP 12
            E+K+ GSVGRL++N+EAKI+DP
Sbjct: 389  ESKRHGSVGRLAENMEAKIVDP 410


>ref|XP_003528115.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 597

 Score =  386 bits (992), Expect = e-105
 Identities = 208/386 (53%), Positives = 275/386 (71%), Gaps = 6/386 (1%)
 Frame = -2

Query: 1151 STSTIDSRSGFCSTTKIFHSLRPPVHLPPTNIPLSATQYTFALLTK--TPSFSPDNTIAF 978
            +T+TID  SGFCS ++ FHSLRP V LPP + PLS T Y F+LL    T + S   T A 
Sbjct: 45   NTTTIDPNSGFCSHSRTFHSLRPNVPLPPPSHPLSLTDYVFSLLPSAATATASSSITSAI 104

Query: 977  IDYSSGTHLLYSDFLGQVESLAISLRTQFLLEKGDVAFVLSPTSLQIPILYLALLSIGVI 798
            ID ++  HL YS  L QV+SL  SL++   L KG VA +L+P+SL +P+LY +LLS+GV 
Sbjct: 105  IDAATDRHLSYSLLLRQVKSLTSSLQSLTPLSKGHVALILTPSSLHVPVLYFSLLSLGVT 164

Query: 797  VSPANPTSTLSELSRQISLTKPVIAFATSATANKLPS-LRHETILLDSSRFFSMLTTQKL 621
            ++PANP S+ SEL+  + L KPVIAF+TS  A  +PS L+  TILLDS  F SML   + 
Sbjct: 165  IAPANPLSSQSELTHLVKLAKPVIAFSTSNAAKNIPSSLKFGTILLDSPLFLSMLNNNEY 224

Query: 620  DQVELPA--VVVQQNDTAVILYSSGTTGQVKGVEMTHRTFIAFLAAQHSMIQAESIKKKA 447
               +     V V Q+D+A IL+SSGTTG+VKGV +THR FIA +   + +     +    
Sbjct: 225  VNADSRTRRVEVSQSDSAAILFSSGTTGRVKGVLLTHRNFIALIGGFYHL---RMVVDDD 281

Query: 446  PHEVGLFTVPLFHIYGFYVSIRAVAMGETAILMGRFDFEGMLKAVETHQVTYMPASPPLV 267
            PH V LFT+PLFH++GF++ +RA+A+GET + M RFDFEGMLKAVE +++TYMP SPPLV
Sbjct: 282  PHPVSLFTLPLFHVFGFFMLVRAIAVGETLVFMHRFDFEGMLKAVERYRITYMPVSPPLV 341

Query: 266  VAFAKLALVEKYNLSSLLMVECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEA-AGVATM 90
            VA AK  LV+KY++SSL  +  GGAPLGKEV+  F ++FP+++I QGYGLTE+  G A +
Sbjct: 342  VALAKSELVKKYDMSSLRYLGSGGAPLGKEVAEDFRAQFPNVEIGQGYGLTESGGGAARV 401

Query: 89   LGPDETKKFGSVGRLSQNIEAKIIDP 12
            LGPDE+K+ GSVGRLS+N+EAKI+DP
Sbjct: 402  LGPDESKRHGSVGRLSENMEAKIVDP 427


>ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]
            gi|355491125|gb|AES72328.1| 4-coumarate-coa ligase
            [Medicago truncatula]
          Length = 562

 Score =  385 bits (990), Expect = e-105
 Identities = 198/381 (51%), Positives = 273/381 (71%), Gaps = 2/381 (0%)
 Frame = -2

Query: 1148 TSTIDSRSGFCSTTKIFHSLRPPVHLPPTNIPLSATQYTFALLTKTPSFSPDNTIAFIDY 969
            ++TID  +G+CS ++ FHSLRP   LPP + PLS T Y  +LL+ T + S +NT A ID 
Sbjct: 13   STTIDPNTGYCSHSRTFHSLRPIAPLPPPSEPLSLTDYALSLLSTTTAVS-NNTTALIDA 71

Query: 968  SSGTHLLYSDFLGQVESLAISLRTQFLLEKGDVAFVLSPTSLQIPILYLALLSIGVIVSP 789
            ++  HL Y  FL Q++SL+  L++   L KG VA +L P+S+ +P+LY +LLS+GV ++P
Sbjct: 72   ATDHHLTYPTFLRQIKSLSSFLQSHTTLSKGHVALILIPSSIHVPVLYFSLLSLGVTIAP 131

Query: 788  ANPTSTLSELSRQISLTKPVIAFATSATANKLPSLRHETILLDSSRFFSMLTTQKLDQVE 609
            ANP S+ SELS  + L  PVIAF+TS+TA K+P L   T++ DS  F S++ +      E
Sbjct: 132  ANPLSSPSELSHLVHLINPVIAFSTSSTATKIPKLPLGTVITDSPSFLSVINSTTDTHTE 191

Query: 608  LPAVVVQQNDTAVILYSSGTTGQVKGVEMTHRTFIAFLAAQHSMIQA-ESIKKKAPHEVG 432
            L  VV  Q+DTA IL+SSGTTG+VKGV +TH  FIA +     M  A +   +  PH V 
Sbjct: 192  LRPVVTSQSDTAAILFSSGTTGRVKGVLLTHGNFIALIGGFCFMKHAYDDGIEDEPHPVS 251

Query: 431  LFTVPLFHIYGFYVSIRAVAMGETAILMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAK 252
            LF +PLFH++GF++ +RA+AMGET +LM RFDFEGMLKAVE +++TYMP SPPL+ AF K
Sbjct: 252  LFPLPLFHVFGFFMMVRALAMGETLVLMQRFDFEGMLKAVEKYRITYMPVSPPLITAFTK 311

Query: 251  LALVEKYNLSSLLMVECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEA-AGVATMLGPDE 75
              LV+KY++SS+ ++  GGAPLGKEV+  F ++FP+++IVQGYGLTE+  G A M+G DE
Sbjct: 312  SELVKKYDISSIRLLGSGGAPLGKEVAESFKAKFPNVEIVQGYGLTESGGGAARMIGFDE 371

Query: 74   TKKFGSVGRLSQNIEAKIIDP 12
             K+ GSVGRL++N+EAKI+DP
Sbjct: 372  AKRHGSVGRLAENMEAKIVDP 392


>ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222859381|gb|EEE96928.1|
            acyl:coa ligase [Populus trichocarpa]
          Length = 550

 Score =  384 bits (987), Expect = e-104
 Identities = 207/382 (54%), Positives = 267/382 (69%), Gaps = 3/382 (0%)
 Frame = -2

Query: 1142 TIDSRSGFCSTTKIFHSLRPPVHLPPTNIPLSATQYTFALLTKTPSFSPDNTIAFIDY-S 966
            +I+ R+GFC  TK FHSLRPP   PP + PLS T +  +LL    S  P  T  ++   S
Sbjct: 5    SINPRTGFCQQTKTFHSLRPPTPFPPPHQPLSITHFILSLLQS--STVPTTTTTYLTIPS 62

Query: 965  SGTHLLYSDFLGQVESLAISLRTQFLLEKGDVAFVLSPTSLQIPILYLALLSIGVIVSPA 786
            +G  + YS  + Q+ SL+ SL+  + L   DVAF+L P SL +P+LYL+L+ +GVI+SPA
Sbjct: 63   TGESITYSQAIDQIHSLSSSLKNHYSLNNKDVAFILCPPSLHVPVLYLSLMYLGVIISPA 122

Query: 785  NPTSTLSELSRQISLTKPVIAFATSATANKLPSLRHETILLDSSRFFSMLTTQKLDQVEL 606
            NP S+ SEL+ Q  L KP IAFATS TA+KLPSL   TIL+DS  F S+LT  K  Q + 
Sbjct: 123  NPLSSDSELAHQFQLCKPKIAFATSQTAHKLPSLPLGTILIDSPEFTSLLTQPK-PQAKQ 181

Query: 605  PAVVVQQNDTAVILYSSGTTGQVKGVEMTHRTFIAFLAA-QHSMIQAESIKKKAPHEVGL 429
            P V V Q+D A ILYSSGTTG+VKGV +THR  IA ++   H+M + E  + + P  V L
Sbjct: 182  PRVEVSQSDIAAILYSSGTTGRVKGVALTHRNLIALISGFHHNMKEPEPNQPEQP-PVSL 240

Query: 428  FTVPLFHIYGFYVSIRAVAMGETAILMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAKL 249
            F +PLFH++GF++SI A + GET +LM RFDF  MLK VE ++VTYMP SPPL+VAF K 
Sbjct: 241  FILPLFHVFGFFMSINAFSRGETLVLMERFDFVQMLKHVEKYRVTYMPVSPPLIVAFVKS 300

Query: 248  ALVEKYNLSSLLMVECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEAAGVAT-MLGPDET 72
             L EKY+LSSL  + CGGAPLGKEV+ KF  +FPH++IVQGYGLTE  G A+  LGP+ET
Sbjct: 301  DLTEKYDLSSLRSLGCGGAPLGKEVADKFKEKFPHVEIVQGYGLTETGGGASRTLGPEET 360

Query: 71   KKFGSVGRLSQNIEAKIIDPRS 6
             +  SVGRLS+N+EAKI+DP +
Sbjct: 361  SQHASVGRLSENMEAKIVDPET 382


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