BLASTX nr result
ID: Coptis24_contig00017432
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017432 (432 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAR96002.1| retrotransposon-like protein [Musa acuminata] 81 8e-14 gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 78 7e-13 dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 78 7e-13 emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera] 76 3e-12 emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera] 75 6e-12 >gb|AAR96002.1| retrotransposon-like protein [Musa acuminata] Length = 521 Score = 81.3 bits (199), Expect = 8e-14 Identities = 36/47 (76%), Positives = 42/47 (89%) Frame = +2 Query: 2 KLDDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTIAD 142 KLD+KAK CIFLGYG E+FGY+L+DP+NKK+IRSRDVVFLEDQ D Sbjct: 392 KLDNKAKACIFLGYGHEEFGYRLWDPVNKKIIRSRDVVFLEDQLFDD 438 >gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] Length = 1415 Score = 78.2 bits (191), Expect = 7e-13 Identities = 32/50 (64%), Positives = 43/50 (86%) Frame = +2 Query: 2 KLDDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTIADFEE 151 KLD K +QCIF+GYG ++FGY+LYDP+ KK++RSRDVVF E+QTI D ++ Sbjct: 661 KLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDK 710 >dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] Length = 1338 Score = 78.2 bits (191), Expect = 7e-13 Identities = 32/53 (60%), Positives = 43/53 (81%) Frame = +2 Query: 2 KLDDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTIADFEEGEK 160 KLD K ++C+F+GYG + GYK YDP+ KK++RSRDVVF+EDQTI D ++ EK Sbjct: 663 KLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEK 715 >emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera] Length = 458 Score = 75.9 bits (185), Expect = 3e-12 Identities = 34/53 (64%), Positives = 42/53 (79%) Frame = +2 Query: 2 KLDDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTIADFEEGEK 160 KLD K KQCIFLGY +E+FGY+L+DP KK+IRSR VVF +DQTI D + +K Sbjct: 347 KLDSKTKQCIFLGYSNEEFGYRLWDPATKKIIRSRYVVFFKDQTIEDLDRVKK 399 >emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera] Length = 626 Score = 75.1 bits (183), Expect = 6e-12 Identities = 32/53 (60%), Positives = 42/53 (79%) Frame = +2 Query: 2 KLDDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTIADFEEGEK 160 KLD KQCIFLGY +E+FGY+L+DP K++I+SRDV+F EDQTIA + +K Sbjct: 179 KLDSNTKQCIFLGYSNEEFGYRLWDPTTKQIIKSRDVIFFEDQTIAKLDRVKK 231