BLASTX nr result

ID: Coptis24_contig00017431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017431
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit...   115   1e-23
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
ref|XP_002271208.2| PREDICTED: transcription factor bHLH120-like...   105   2e-20
ref|XP_003548234.1| PREDICTED: transcription factor bHLH126-like...   105   2e-20

>ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084088|emb|CBI24476.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  115 bits (288), Expect = 1e-23
 Identities = 68/144 (47%), Positives = 85/144 (59%)
 Frame = -2

Query: 890 LRSLVPQEYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRFXXXXXXXXXXXXX 711
           LRSL+P EY+KGKR+IS+HMN A NYIKH QKKIKEL E+R++LK               
Sbjct: 92  LRSLLPLEYIKGKRAISEHMNGAVNYIKHLQKKIKELGEKRNELKSL-------ANSSSR 144

Query: 710 XXXXNYVTVHTCCSGVEVTVRSGPSDRVLPLSMVLGALAEEGLSANICTSTRVNENTFYA 531
               N+VTV  C  GVE+ V SG     +PLS  L  L EEGLS   C ST+VN    + 
Sbjct: 145 NSSGNFVTVCPCWGGVEIVVSSGGEKEGMPLSRALETLLEEGLSVISCISTKVNGRLLHT 204

Query: 530 IQSEVNNPKDLDLLSLRHKLIDLV 459
           I  EV++   +DL  L+ +L D V
Sbjct: 205 IHCEVSDITSIDLHGLQQQLSDQV 228


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  115 bits (288), Expect = 1e-23
 Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
 Frame = -2

Query: 890 LRSLVPQEYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRF-XXXXXXXXXXXX 714
           LR+L+P E++KGKRSISDHMNEA NYIK+ QKKIKE   +RD+LK+              
Sbjct: 94  LRALLPLEFIKGKRSISDHMNEAVNYIKYLQKKIKETSAKRDELKKLSDFSSVASPSGCS 153

Query: 713 XXXXXNYVTVHTCCSGVEVTVRSGPSDRVLPLSMVLGALAEEGLSANICTSTRVNENTFY 534
                + V +     G+E+T  S    R LPLS VL  L EEG+S   C ST+VNE  F+
Sbjct: 154 NKSSSSSVALQPYPGGIEITFDSDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFH 213

Query: 533 AIQSEVNNPKDLDLLSLRHKLIDLVNVNQGL 441
           ++Q+EVN+P  L+L  L  KL  +V+    L
Sbjct: 214 SVQTEVNDPTCLNLSELWQKLTLVVSSTSDL 244


>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  112 bits (280), Expect = 1e-22
 Identities = 66/141 (46%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -2

Query: 890 LRSLVPQEYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRFXXXXXXXXXXXXX 711
           LR+L+P E++KGKRSISDHMNE+ NYIK+ QKKIKEL  +RD LK+              
Sbjct: 94  LRALLPLEFIKGKRSISDHMNESVNYIKYLQKKIKELSAKRDGLKKSPNLSFDSPSGSSN 153

Query: 710 XXXXNY-VTVHTCCSGVEVTVRSGPSDRVLPLSMVLGALAEEGLSANICTSTRVNENTFY 534
                  VT+     G+EV   S    +  PLS VL  L EEG+S   C ST+VNE  F+
Sbjct: 154 KYSPISPVTLQPYPGGIEVVFDSDFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFH 213

Query: 533 AIQSEVNNPKDLDLLSLRHKL 471
            +Q+EVN+P  L+L  LR KL
Sbjct: 214 TVQTEVNDPACLNLSELRQKL 234


>ref|XP_002271208.2| PREDICTED: transcription factor bHLH120-like [Vitis vinifera]
          Length = 195

 Score =  105 bits (261), Expect = 2e-20
 Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
 Frame = -2

Query: 890 LRSLVPQEYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRFXXXXXXXXXXXXX 711
           LRSL+P EY+KGKRSISDHM+EA NYI H Q KI++L  +RD+L+               
Sbjct: 47  LRSLLPLEYVKGKRSISDHMHEAVNYINHLQMKIQDLGTKRDELRNQSNMSACDSESGSS 106

Query: 710 XXXXNY-VTVHTCCSGVEVTVRSGPSDRVLPLSMVLGALAEEGLSANICTSTRVNENTFY 534
                + V V  C  GVE+ +  G  + +L LS V+  L EEGL  + C ST+VNE   +
Sbjct: 107 YKRSRHCVIVSPCMDGVEILISGGFKEGLL-LSKVMEVLLEEGLGVHRCVSTKVNEGLLH 165

Query: 533 AIQSEVNNPKDLDLLSLRHKLIDLV 459
            +  +V++P   DL  LR KL + V
Sbjct: 166 TMNCKVSDPTGFDLCGLRQKLWNAV 190


>ref|XP_003548234.1| PREDICTED: transcription factor bHLH126-like [Glycine max]
          Length = 246

 Score =  105 bits (261), Expect = 2e-20
 Identities = 58/140 (41%), Positives = 77/140 (55%)
 Frame = -2

Query: 890 LRSLVPQEYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRFXXXXXXXXXXXXX 711
           LRSL+P E++KGKRSISDHMNEAANYIKH Q  IKEL  +RD++K+              
Sbjct: 96  LRSLLPLEFIKGKRSISDHMNEAANYIKHMQNNIKELGAKRDEMKKLSNHCNNMENNHAG 155

Query: 710 XXXXNYVTVHTCCSGVEVTVRSGPSDRVLPLSMVLGALAEEGLSANICTSTRVNENTFYA 531
                  T+H     + + + SG  +    +S +L  L EEG     C ST VN    ++
Sbjct: 156 LHTSCNFTIHENNGIMGIEITSGFREEKPKISKLLQFLTEEGFEVVSCFSTEVNGRLLHS 215

Query: 530 IQSEVNNPKDLDLLSLRHKL 471
           +Q EVNN   +DL  LR K+
Sbjct: 216 VQCEVNNSNSVDLSELRKKV 235


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