BLASTX nr result

ID: Coptis24_contig00017413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017413
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337388.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002336390.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
gb|AFW78661.1| hypothetical protein ZEAMMB73_036961 [Zea mays]         75   4e-12
gb|AFW78653.1| hypothetical protein ZEAMMB73_036961 [Zea mays]         75   4e-12
ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852...    75   4e-12

>ref|XP_002337388.1| predicted protein [Populus trichocarpa] gi|222838956|gb|EEE77307.1|
           predicted protein [Populus trichocarpa]
          Length = 62

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/48 (72%), Positives = 40/48 (83%)
 Frame = -1

Query: 386 SLEDVMKVAFDYGFHLEHEKIVETTYTANPQAMMQNRYNAAFWTMTKK 243
           SLEDV  VAF+YGF +E EK +ETTYT NP++MMQNRY AAFWTM KK
Sbjct: 6   SLEDVKCVAFNYGFEVEKEKTIETTYTTNPRSMMQNRYFAAFWTMRKK 53


>ref|XP_002336390.1| predicted protein [Populus trichocarpa] gi|222834882|gb|EEE73331.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/48 (72%), Positives = 40/48 (83%)
 Frame = -1

Query: 386 SLEDVMKVAFDYGFHLEHEKIVETTYTANPQAMMQNRYNAAFWTMTKK 243
           SLEDV  VAF+YGF +E EK +ETTYT NP++MMQNRY AAFWTM KK
Sbjct: 226 SLEDVKCVAFNYGFEVEKEKTIETTYTTNPRSMMQNRYFAAFWTMRKK 273


>gb|AFW78661.1| hypothetical protein ZEAMMB73_036961 [Zea mays]
          Length = 518

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = -1

Query: 386 SLEDVMKVAFDYGFHLEHEKIVETTYTANPQAMMQNRYNAAFWTMTK 246
           SLEDV KVA+ YGF +E EK++ETTYTAN +AMMQNRY AAFWTM K
Sbjct: 461 SLEDVKKVAYHYGFTMEVEKMIETTYTANMKAMMQNRYRAAFWTMRK 507


>gb|AFW78653.1| hypothetical protein ZEAMMB73_036961 [Zea mays]
          Length = 481

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = -1

Query: 386 SLEDVMKVAFDYGFHLEHEKIVETTYTANPQAMMQNRYNAAFWTMTK 246
           SLEDV KVA+ YGF +E EK++ETTYTAN +AMMQNRY AAFWTM K
Sbjct: 424 SLEDVKKVAYHYGFTMEVEKMIETTYTANMKAMMQNRYRAAFWTMRK 470


>ref|XP_003634616.1| PREDICTED: uncharacterized protein LOC100852521 [Vitis vinifera]
          Length = 611

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/48 (70%), Positives = 39/48 (81%)
 Frame = -1

Query: 386 SLEDVMKVAFDYGFHLEHEKIVETTYTANPQAMMQNRYNAAFWTMTKK 243
           SLEDV KVA  YGF +E E+ +ETTYT NP++MMQNRY AAFWTM KK
Sbjct: 560 SLEDVKKVALHYGFQMEKERTIETTYTTNPRSMMQNRYFAAFWTMRKK 607


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