BLASTX nr result

ID: Coptis24_contig00017410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017410
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine...   122   2e-26
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine...   122   2e-26
ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|22353...   122   4e-26
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...   119   3e-25

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/122 (45%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   NNTLTGQISRWLMETRYNFDISYNNFNGTSEPS-CRAYKLNAISSFPAQPANSVNWCLKK 179
           NN+L+G +  W+ ++   FD+SYNNF G S  + C+   +N +SSF +  +NSV WCLKK
Sbjct: 500 NNSLSGTLPSWISDSNQKFDVSYNNFTGPSSLTVCQQRAVNLVSSFSSSDSNSVLWCLKK 559

Query: 180 NLPCPGKSKYYNLFVDCGGPGLSFEGERYEPDSDGMGPSSFV-FTDKWACSTTGDYLGNE 356
            LPCPG +K+Y+LF++CGG  +++EG  YE D DG G S F  +++KW  S+TG +  N+
Sbjct: 560 GLPCPGNAKHYSLFINCGGSEINYEGNDYERDLDGSGASHFSDYSEKWGYSSTGVFTNND 619

Query: 357 KA 362
            A
Sbjct: 620 DA 621


>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like, partial [Cucumis sativus]
          Length = 993

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/121 (43%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   NNTLTGQISRWLMETRYNFDISYNNFNGTSEPSCRAYKLNAISSFPAQPANSVNWCLKKN 182
           NN+L+G++  W++ ++ N D+SYNNF+G++  SC+   +N I+S+P    + V WCLKK+
Sbjct: 301 NNSLSGEVPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPATNHQVPWCLKKD 360

Query: 183 LPCPGKSKYYNLFVDCGGPGLSFEGERYEPDSDGMGPSSFV-FTDKWACSTTGDYLGNEK 359
           LPC GK++Y++LF++CGG  ++ +G  YE D    G S+F   ++KWA S+TG +LG+E 
Sbjct: 361 LPCSGKAEYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDEN 420

Query: 360 A 362
           A
Sbjct: 421 A 421


>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Cucumis sativus]
          Length = 1030

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/121 (43%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   NNTLTGQISRWLMETRYNFDISYNNFNGTSEPSCRAYKLNAISSFPAQPANSVNWCLKKN 182
           NN+L+G++  W++ ++ N D+SYNNF+G++  SC+   +N I+S+P    + V WCLKK+
Sbjct: 338 NNSLSGEVPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPATNHQVPWCLKKD 397

Query: 183 LPCPGKSKYYNLFVDCGGPGLSFEGERYEPDSDGMGPSSFV-FTDKWACSTTGDYLGNEK 359
           LPC GK++Y++LF++CGG  ++ +G  YE D    G S+F   ++KWA S+TG +LG+E 
Sbjct: 398 LPCSGKAEYHSLFINCGGTRVTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDEN 457

Query: 360 A 362
           A
Sbjct: 458 A 458


>ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|223536184|gb|EEF37837.1|
           kinase, putative [Ricinus communis]
          Length = 897

 Score =  122 bits (305), Expect = 4e-26
 Identities = 53/121 (43%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   NNTLTGQISRWLMETRYNFDISYNNFNGTSEPSCRAYKLNAISSFPAQPANSVNWCLKKN 182
           NN+LTG+I  W++ T  N+D+SYNNF GT   SC+  ++N +SS  +  ++   WCL+K+
Sbjct: 341 NNSLTGEIPSWILRTSKNYDLSYNNFTGTVSTSCQQPEVNLVSSQLSSASSETAWCLRKD 400

Query: 183 LPCPGKSKYYNLFVDCGGPGLSFEGERYEPDSDGMGPSSFV-FTDKWACSTTGDYLGNEK 359
           L C G  ++++LF++CGGP L+FE   YE D     PSSF+  +++WA S+TG Y+ N+ 
Sbjct: 401 LTCSGDPEHHSLFINCGGPKLTFENNEYEEDLTRGSPSSFISVSERWAYSSTGAYMNNDG 460

Query: 360 A 362
           A
Sbjct: 461 A 461


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
           gi|355485310|gb|AES66513.1| Receptor-like
           serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/122 (46%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   NNTLTGQISRWLMETRYNFDISYNNFNGTSEPSCRAYKLNAISSFPAQPANSVNWCLKKN 182
           NN+L G I  W++  + NFD+S+NNF  +S P C+   +N  SS  +  AN+   CLK+N
Sbjct: 342 NNSLNGTIPGWILSNKQNFDLSFNNFTESSAPDCQILDVNLASSV-SPSANTTLSCLKRN 400

Query: 183 LPCPGKSKYYNLFVDCGGPGLSFEGERYEPDSDGMGPSSFV--FTDKWACSTTGDYLGNE 356
           LPC GK +Y++LF++CGGP   F+   YE D    G S+FV   + KWA S+TG +LGNE
Sbjct: 401 LPCSGKPRYHSLFINCGGPATEFDDNEYEADDHLRGISNFVPSVSGKWAYSSTGVFLGNE 460

Query: 357 KA 362
           KA
Sbjct: 461 KA 462


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