BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017406
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   6e-16
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    80   6e-13
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    79   2e-12
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    77   7e-12
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    77   7e-12

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 6/195 (3%)
 Frame = -1

Query: 876  SRAIWCGTNLSGLVDRRNMNIGSFKEQLLCLLQYIRTMQNGEV*CCYFVGVLWIIWTSRN 697
            +R +W    + G  +R  +N+GS+  + L       TM   E    + V   W+ W  RN
Sbjct: 1105 ARILWRKLGMLGEHNREEINLGSWITKNLSA----DTMMGSEWLRVFAVSCWWL-WRWRN 1159

Query: 696  ETRFQGKRPHPSRYISRVLKHIQMVMEIMSR------QTHREKMLVYIKWFPPKEGLVKL 535
            +  F      P   +S +   ++ + E M R      Q    +  + ++W  PKEG VKL
Sbjct: 1160 DRCFNRNPSIPIDQVSFIFARVKEIKEAMDRNDTNKSQHSGRRKEILVRWQCPKEGWVKL 1219

Query: 534  NTDGASIGNPGYAGGGCILRDSAGHFIMGASIPIFFATNNEAEFVALLYGLQIVTAAGYM 355
            NTDGAS GNPG AGGG ++R   G      +I     T  +AE +A+L GL I     + 
Sbjct: 1220 NTDGASKGNPGPAGGGGLIRGPRGEIHEVFAINCGSCTCTKAELLAVLRGLMIAWEGNHK 1279

Query: 354  KVEVETDSQLLFKVL 310
            +V V  DS+L+ K+L
Sbjct: 1280 QVIVSVDSELVAKLL 1294


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
 Frame = -1

Query: 735  FVGVLWIIWTSRNETRFQGKRPHPSRYISRVLKHI-QMVMEIMSRQTHREKMLVYIKWFP 559
            F    W IW SRN+T F+    HP    +RV+      +       T      V ++W P
Sbjct: 1141 FTTAFWHIWCSRNKTVFECAVNHPKFTYNRVVADFFTNIRAFQVNNTQGNGSKVVLRWKP 1200

Query: 558  PKEGLVKLNTDGASIGNPGYAGGGCILRDSAGHFIMGASIPIFFATNNEAEFVALLYGLQ 379
            P +G +KLNTDGA   +   AG G + RD+ G++ +G +  +   +   AE +A+  GLQ
Sbjct: 1201 PHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIREGLQ 1260

Query: 378  IVTAAGYMKVEVETDS----QLLFKVLTEDN 298
            +     Y K+EVE D+    QLL K L  +N
Sbjct: 1261 VAWDCNYHKLEVECDAKGVVQLLAKPLEAEN 1291


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
 Frame = -1

Query: 735 FVGVLWIIWTSRNETRF--QGKRPHPSRYISRVLKHIQMVME-IMSRQTHREKMLVYIKW 565
           FV  +W  W  R    F   GK     ++I  + + + +    +   +    ++   + W
Sbjct: 94  FVMAVWWGWKWRCGNIFGGNGKCRDRVKFIKDLAEEVAIANAFVKGNEVRVSRVERLVSW 153

Query: 564 FPPKEGLVKLNTDGASIGNPGYAGGGCILRDSAGHFIMGASIPIFFATNNEAEFVALLYG 385
             P++G VKLNTDGAS GNPG+A  G +LRD  G +I G ++ I   +   AE   + YG
Sbjct: 154 VSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYG 213

Query: 384 LQIVTAAGYMKVEVETDSQLLFKVLTEDNLNCHFFFFLI 268
           L I    G  +VE+E DS+++   LT    + H   FL+
Sbjct: 214 LFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLL 252


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
 Frame = -1

Query: 723 LWIIWTSRNETRF---QGKRPHPSRYISRVLKHIQMVMEIMSRQTHREKMLVYIKWFPPK 553
           LW IW  R    F   QG        I R+++  +      + +    K    + W  P+
Sbjct: 21  LWYIWKERCNRVFGVDQGNWFRAILAIKRMVRDTEFTQRHGNDEGRSSKEDTQVGWKYPQ 80

Query: 552 EGLVKLNTDGASIGNPGYAGGGCILRDSAGHFIMGASIPIFFATNNEAEFVALLYGLQIV 373
           E  +KLN DG S GNPG AG G ++RD  G +I G +  I   ++  AE  A+  GLQ+ 
Sbjct: 81  EERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLA 140

Query: 372 TAAGYMKVEVETDSQLLFKVLTEDNL 295
              G+ KV++E+DS+++  ++  D++
Sbjct: 141 WDRGFRKVDLESDSKVVVGLINGDSV 166


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
 Frame = -1

Query: 723 LWIIWTSRNETRF---QGKRPHPSRYISRVLKHIQMVMEIMSRQTHREKMLVYIKWFPPK 553
           LW IW  R    F   QG        I R+++  +      + +    K    + W  P+
Sbjct: 21  LWYIWKERCNRVFGVDQGNWFRAILAIKRMVRDTEFTQRHGNDEGRSSKEDTQVGWKYPQ 80

Query: 552 EGLVKLNTDGASIGNPGYAGGGCILRDSAGHFIMGASIPIFFATNNEAEFVALLYGLQIV 373
           E  +KLN DG S GNPG AG G ++RD  G +I G +  I   ++  AE  A+  GLQ+ 
Sbjct: 81  EERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLA 140

Query: 372 TAAGYMKVEVETDSQLLFKVLTEDNL 295
              G+ KV++E+DS+++  ++  D++
Sbjct: 141 WDRGFRKVDLESDSKVVVGLINGDSV 166