BLASTX nr result
ID: Coptis24_contig00017405
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017405 (610 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316411.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 ref|XP_002314312.1| predicted protein [Populus trichocarpa] gi|2... 59 7e-07 emb|CAN72854.1| hypothetical protein VITISV_043216 [Vitis vinifera] 58 1e-06 emb|CAN78956.1| hypothetical protein VITISV_025690 [Vitis vinifera] 57 2e-06 ref|XP_002315344.1| predicted protein [Populus trichocarpa] gi|2... 56 6e-06 >ref|XP_002316411.1| predicted protein [Populus trichocarpa] gi|222865451|gb|EEF02582.1| predicted protein [Populus trichocarpa] Length = 115 Score = 63.9 bits (154), Expect = 2e-08 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 7/116 (6%) Frame = -3 Query: 581 MSIDHQVRPALPPIRLR-TINVQTRH----TDEDGEVIQL--SVGDDECRTPTSSEYKIP 423 MS D ++ LP I++R I ++T TD + +IQ S DD+C+TP S E+KIP Sbjct: 1 MSTDLELLHDLPRIQVRPAIKIETLQSCSATDGNKAIIQQENSETDDDCQTPKSEEHKIP 60 Query: 422 MILSCPPAPXXXXXXXXXXXXLSEIQFFEVVGRDEVXXXXXXXXXXSHNIRKRPCP 255 +LSCPPAP L+EI FFE+V +EV + KR CP Sbjct: 61 AVLSCPPAPRKAKRNISCKRKLTEIDFFEIVNGEEVDSFFQSSFEL---LTKRRCP 113 >ref|XP_002314312.1| predicted protein [Populus trichocarpa] gi|222850720|gb|EEE88267.1| predicted protein [Populus trichocarpa] Length = 112 Score = 58.9 bits (141), Expect = 7e-07 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Frame = -3 Query: 581 MSIDHQVRPALPPIRLRTINVQTRHTDEDGEVIQLSVGD-DECRTPTSSEYKIPMILSCP 405 MS DH+ + L ++ +V H E+GE+ + V D +EC+TPTSS++KIP I SCP Sbjct: 1 MSKDHKTQKNLQKVQQ---SVSQGHEQEEGELENIQVDDQEECKTPTSSDHKIPAIQSCP 57 Query: 404 PAPXXXXXXXXXXXXLSEIQFFEVVGRDEV 315 P P L E FFE DEV Sbjct: 58 PTPRKKVQVFEHKRKLPE--FFETTNNDEV 85 >emb|CAN72854.1| hypothetical protein VITISV_043216 [Vitis vinifera] Length = 102 Score = 57.8 bits (138), Expect = 1e-06 Identities = 26/48 (54%), Positives = 32/48 (66%) Frame = -3 Query: 458 CRTPTSSEYKIPMILSCPPAPXXXXXXXXXXXXLSEIQFFEVVGRDEV 315 CRTPTS+E+KIP+IL+CPPAP + E FFE+V RDEV Sbjct: 35 CRTPTSAEHKIPVILTCPPAPRKPRRVVRCKRRIREFDFFEIVNRDEV 82 >emb|CAN78956.1| hypothetical protein VITISV_025690 [Vitis vinifera] Length = 107 Score = 57.4 bits (137), Expect = 2e-06 Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = -3 Query: 500 EDGEVIQLSVGDDE-CRTPTSSEYKIPMILSCPPAPXXXXXXXXXXXXLSEIQFFEVVGR 324 E+ L+ D E CRTPTS ++KIP ILSCPPAP E+QFFE G Sbjct: 17 EENRESTLTXDDPEGCRTPTSRDHKIPSILSCPPAPKKRGKVLSQKRKFQEVQFFEFTGG 76 Query: 323 DEV 315 DEV Sbjct: 77 DEV 79 >ref|XP_002315344.1| predicted protein [Populus trichocarpa] gi|222864384|gb|EEF01515.1| predicted protein [Populus trichocarpa] Length = 103 Score = 55.8 bits (133), Expect = 6e-06 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Frame = -3 Query: 581 MSIDHQVRPALPPIRLRTINVQTRHTDEDGEVIQLSVGDDECRTPTSSEYKIPMILSCPP 402 MS D ++ LP + L+ I ED + Q EC TPTS+++KIP +L+CPP Sbjct: 1 MSSDQELFQNLPKLGLKVIKTTRNDDGEDDDCEQY-----ECCTPTSAQHKIPALLTCPP 55 Query: 401 AP-XXXXXXXXXXXXLSEIQFFEVVGRDEV 315 AP LS + FFEV+ R+EV Sbjct: 56 APKKPPRSPDSCKRKLSNLHFFEVMNREEV 85