BLASTX nr result
ID: Coptis24_contig00017401
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017401 (1760 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin... 475 e-131 ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin... 463 e-128 ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin... 460 e-127 ref|XP_002527651.1| nucleic acid binding protein, putative [Rici... 457 e-126 gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indi... 455 e-125 >ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Vitis vinifera] Length = 372 Score = 475 bits (1222), Expect = e-131 Identities = 236/356 (66%), Positives = 258/356 (72%), Gaps = 39/356 (10%) Frame = +1 Query: 280 DNWI---NDQSIWATEDDYNVWNADDRGGT-------------QSGGEPPNKKSRGGD-- 405 DNWI +DQ +WATEDDY VWN D G T +SG EPPNKKSR Sbjct: 18 DNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSRNSQVV 77 Query: 406 --SSQFGGVD---PGNRARAIGKMFFKTKLCCKFRNGTCPYITNCNFAHGIEELRKPPPN 570 G D P NR++AIGKMFFKTKLCCKFR GTCPY+TNCNFAH I+ELR+PPPN Sbjct: 78 DSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPN 137 Query: 571 WQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHCKKFYTEEGCPYGDNC 750 WQEIVAA D+ERGVS EPREE QIP + S+ G E+QRSYKGRHCKKFYT+EGCPYGDNC Sbjct: 138 WQEIVAAHDEERGVSSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNC 197 Query: 751 TFLHDEQSKARESVAISLGPSM----------SNGYGNGVNGQSQKPSNWKTRICNKWEM 900 TFLHDEQSKARESVAISLGP G G G +G + KPSNWKTRICNKWE+ Sbjct: 198 TFLHDEQSKARESVAISLGPGAGGGGGGGGGGGGGGGGGGSGSNIKPSNWKTRICNKWEL 257 Query: 901 TGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGVSLKMPMDTVVV--- 1071 TGYCPFGSKCHFAHG+GELHRYGGGLVD E RD SAPPD KQ GV K P D VV Sbjct: 258 TGYCPFGSKCHFAHGMGELHRYGGGLVD-ESRDSTSAPPDSKQGGVPSKPPSDAVVAFVT 316 Query: 1072 ---STSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWIDDNE 1230 +S PH+DVYH GVPSQR + + QRPG R +KWKGPDKISRIYGDWIDD E Sbjct: 317 SVPLVASVPHSDVYHAGVPSQRPTSVIQRPGQRTQKKWKGPDKISRIYGDWIDDIE 372 >ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Cucumis sativus] Length = 350 Score = 463 bits (1191), Expect = e-128 Identities = 234/364 (64%), Positives = 265/364 (72%), Gaps = 24/364 (6%) Frame = +1 Query: 211 MDYGEGRFVNGNVVEIIPQAQEPDNWINDQSIWATEDDYNVWNADDRGG----------- 357 MDY GNVV +I +NW + +WATED+Y WN G Sbjct: 1 MDYS-----GGNVVHVISGTSN-ENWPGE--VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52 Query: 358 ----TQSGGEPPNKKSRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNC 525 ++SG EPPNKKSR SSQ V NR++AIGKMFFKTKLCCKFR GTCPYITNC Sbjct: 53 RQSQSRSGSEPPNKKSR---SSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNC 107 Query: 526 NFAHGIEELRKPPPNWQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHC 705 NFAH IEELR+PP NWQEIVAA ++E+ V EPREE QIP L ++ G+ESQRSYKGRHC Sbjct: 108 NFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHC 167 Query: 706 KKFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNG---------VNGQSQK 858 KKFYTEEGCPYGD+CTFLHDEQSK RESVAISLGP +G G G NG + K Sbjct: 168 KKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNTK 227 Query: 859 PSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGV 1038 PSNWKTRICNKWE+TGYCPFG+KCHFAHG ELHRYGGGL++ E RD ++APPDLKQ GV Sbjct: 228 PSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQ-GV 286 Query: 1039 SLKMPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWI 1218 K P DT+V S SAPH+DVYH+ VPSQRS+++ QRPG R QKWKGPDKISRIYGDWI Sbjct: 287 LPKAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWI 346 Query: 1219 DDNE 1230 DD E Sbjct: 347 DDIE 350 >ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Cucumis sativus] Length = 339 Score = 460 bits (1183), Expect = e-127 Identities = 231/355 (65%), Positives = 261/355 (73%), Gaps = 15/355 (4%) Frame = +1 Query: 211 MDYGEGRFVNGNVVEIIPQAQEPDNWINDQSIWATEDDYNVWNADDRGG----------- 357 MDY GNVV +I +NW + +WATED+Y WN G Sbjct: 1 MDYS-----GGNVVHVISGTSN-ENWPGE--VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52 Query: 358 ----TQSGGEPPNKKSRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNC 525 ++SG EPPNKKSR SSQ V NR++AIGKMFFKTKLCCKFR GTCPYITNC Sbjct: 53 RQSQSRSGSEPPNKKSR---SSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNC 107 Query: 526 NFAHGIEELRKPPPNWQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHC 705 NFAH IEELR+PP NWQEIVAA ++E+ V EPREE QIP L ++ G+ESQRSYKGRHC Sbjct: 108 NFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHC 167 Query: 706 KKFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGVNGQSQKPSNWKTRIC 885 KKFYTEEGCPYGD+CTFLHDEQSK RESVAIS G G G NG + KPSNWKTRIC Sbjct: 168 KKFYTEEGCPYGDSCTFLHDEQSKNRESVAISFGG--GGGGGGSGNGSNTKPSNWKTRIC 225 Query: 886 NKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGVSLKMPMDTV 1065 NKWE+TGYCPFG+KCHFAHG ELHRYGGGL++ E RD ++APPDLKQ GV K P DT+ Sbjct: 226 NKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQ-GVLPKAPGDTL 284 Query: 1066 VVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWIDDNE 1230 V S SAPH+DVYH+ VPSQRS+++ QRPG R QKWKGPDKISRIYGDWIDD E Sbjct: 285 VASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 339 >ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis] gi|223532956|gb|EEF34722.1| nucleic acid binding protein, putative [Ricinus communis] Length = 349 Score = 457 bits (1176), Expect = e-126 Identities = 227/364 (62%), Positives = 255/364 (70%), Gaps = 24/364 (6%) Frame = +1 Query: 211 MDYGEGRFVNGNVVEIIPQAQEPDNWINDQS----IWATEDDYNVWNADDRGG------- 357 MDY NVV +IP PDNW+ + + +WATEDDY +WN D Sbjct: 1 MDYSRD-----NVVHVIP-GTGPDNWLPNSADSGVVWATEDDYQMWNNSDGPNDNTPSNS 54 Query: 358 ---TQSGGEPPNKKSRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNCN 528 ++SG EPPNKKS+ + ++IGKMFFKTKLCCKFR GTCPYITNCN Sbjct: 55 SFQSRSGSEPPNKKSKNNSQEL-------SSKKSIGKMFFKTKLCCKFRAGTCPYITNCN 107 Query: 529 FAHGIEELRKPPPNWQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHCK 708 FAH IEELR+PPPNWQEIVAA ++ERG +E REE QIP + G ESQRSYKGRHCK Sbjct: 108 FAHSIEELRRPPPNWQEIVAAHEEERGNVMEVREEFQIPSI--GGFSGESQRSYKGRHCK 165 Query: 709 KFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGVNGQSQ----------K 858 KFYTEEGCPYGDNCTFLHDEQSK RESVAISLGP G G G G K Sbjct: 166 KFYTEEGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGGGGGGAGSGNGSGGGSAGNVK 225 Query: 859 PSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGV 1038 PSNWKTRICNKWE+TGYCPFG+KCHFAHG ELHRYGGGL++ EG+D +S P D KQ GV Sbjct: 226 PSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKDPSSVPADTKQGGV 285 Query: 1039 SLKMPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWI 1218 K P D VV S +S PH+DVYH+GVPSQR S++ QRPG R QKWKGPDKISRIYGDWI Sbjct: 286 LSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSHQKWKGPDKISRIYGDWI 345 Query: 1219 DDNE 1230 DD E Sbjct: 346 DDIE 349 >gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group] Length = 367 Score = 455 bits (1171), Expect = e-125 Identities = 232/370 (62%), Positives = 262/370 (70%), Gaps = 41/370 (11%) Frame = +1 Query: 244 NVVEIIPQAQEPDNWIN------DQSIWATEDDYNV-WNADDRGG--TQSGGE--PPNKK 390 N + IIP A PD W N D IWATEDDYN WNAD GG +++G E PP KK Sbjct: 5 NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGGGGSSRAGSEQPPPGKK 64 Query: 391 SRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNCNFAHGIEELRKPPPN 570 SRGG + GG +++RAIGKMFFKTKLCCKFR GTCPY+TNCNFAHG+EELRKPPPN Sbjct: 65 SRGGGGGEGGGNT--SKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPN 122 Query: 571 WQEIVAAQDDERGVSLEPREEHQIPCLISTGV------------GTESQRSYKGRHCKKF 714 WQEIVAA ++ + E REEHQIP + S+G G S R+YKGRHCKKF Sbjct: 123 WQEIVAAHEE----ATEAREEHQIPIMTSSGPTAGGDAGGGGGGGGGSGRAYKGRHCKKF 178 Query: 715 YTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGV----------------NG 846 YT+EGCPYGD CTFLHDEQSKARESVAISL PS+ G G G NG Sbjct: 179 YTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAASASAAAGNG 238 Query: 847 QSQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLK 1026 QKPSNWKTRICNKWEMTGYCPFGSKCHFAHG ELH+YGGGLVD++ RD A+A PD K Sbjct: 239 PMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRD-AAATPDSK 297 Query: 1027 QVGVSLKMPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPG--MRPMQKWKGPDKISR 1200 Q VS K P +T ST+ PHADVYH+GV +QRS++ QR G RP+QKWKGPDKISR Sbjct: 298 QAVVSAKAPAETTAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISR 357 Query: 1201 IYGDWIDDNE 1230 IYGDWID+ E Sbjct: 358 IYGDWIDETE 367