BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017401
         (1760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   475   e-131
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   463   e-128
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   460   e-127
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...   457   e-126
gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indi...   455   e-125

>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Vitis
            vinifera]
          Length = 372

 Score =  475 bits (1222), Expect = e-131
 Identities = 236/356 (66%), Positives = 258/356 (72%), Gaps = 39/356 (10%)
 Frame = +1

Query: 280  DNWI---NDQSIWATEDDYNVWNADDRGGT-------------QSGGEPPNKKSRGGD-- 405
            DNWI   +DQ +WATEDDY VWN D  G T             +SG EPPNKKSR     
Sbjct: 18   DNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSNSNYEGRQSQSRSGSEPPNKKSRNSQVV 77

Query: 406  --SSQFGGVD---PGNRARAIGKMFFKTKLCCKFRNGTCPYITNCNFAHGIEELRKPPPN 570
                   G D   P NR++AIGKMFFKTKLCCKFR GTCPY+TNCNFAH I+ELR+PPPN
Sbjct: 78   DSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPN 137

Query: 571  WQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHCKKFYTEEGCPYGDNC 750
            WQEIVAA D+ERGVS EPREE QIP + S+  G E+QRSYKGRHCKKFYT+EGCPYGDNC
Sbjct: 138  WQEIVAAHDEERGVSSEPREEFQIPSIGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNC 197

Query: 751  TFLHDEQSKARESVAISLGPSM----------SNGYGNGVNGQSQKPSNWKTRICNKWEM 900
            TFLHDEQSKARESVAISLGP              G G G +G + KPSNWKTRICNKWE+
Sbjct: 198  TFLHDEQSKARESVAISLGPGAGGGGGGGGGGGGGGGGGGSGSNIKPSNWKTRICNKWEL 257

Query: 901  TGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGVSLKMPMDTVVV--- 1071
            TGYCPFGSKCHFAHG+GELHRYGGGLVD E RD  SAPPD KQ GV  K P D VV    
Sbjct: 258  TGYCPFGSKCHFAHGMGELHRYGGGLVD-ESRDSTSAPPDSKQGGVPSKPPSDAVVAFVT 316

Query: 1072 ---STSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWIDDNE 1230
                 +S PH+DVYH GVPSQR + + QRPG R  +KWKGPDKISRIYGDWIDD E
Sbjct: 317  SVPLVASVPHSDVYHAGVPSQRPTSVIQRPGQRTQKKWKGPDKISRIYGDWIDDIE 372


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 350

 Score =  463 bits (1191), Expect = e-128
 Identities = 234/364 (64%), Positives = 265/364 (72%), Gaps = 24/364 (6%)
 Frame = +1

Query: 211  MDYGEGRFVNGNVVEIIPQAQEPDNWINDQSIWATEDDYNVWNADDRGG----------- 357
            MDY       GNVV +I      +NW  +  +WATED+Y  WN    G            
Sbjct: 1    MDYS-----GGNVVHVISGTSN-ENWPGE--VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52

Query: 358  ----TQSGGEPPNKKSRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNC 525
                ++SG EPPNKKSR   SSQ   V   NR++AIGKMFFKTKLCCKFR GTCPYITNC
Sbjct: 53   RQSQSRSGSEPPNKKSR---SSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNC 107

Query: 526  NFAHGIEELRKPPPNWQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHC 705
            NFAH IEELR+PP NWQEIVAA ++E+ V  EPREE QIP L ++  G+ESQRSYKGRHC
Sbjct: 108  NFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHC 167

Query: 706  KKFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNG---------VNGQSQK 858
            KKFYTEEGCPYGD+CTFLHDEQSK RESVAISLGP   +G G G          NG + K
Sbjct: 168  KKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNTK 227

Query: 859  PSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGV 1038
            PSNWKTRICNKWE+TGYCPFG+KCHFAHG  ELHRYGGGL++ E RD ++APPDLKQ GV
Sbjct: 228  PSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQ-GV 286

Query: 1039 SLKMPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWI 1218
              K P DT+V S  SAPH+DVYH+ VPSQRS+++ QRPG R  QKWKGPDKISRIYGDWI
Sbjct: 287  LPKAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWI 346

Query: 1219 DDNE 1230
            DD E
Sbjct: 347  DDIE 350


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 339

 Score =  460 bits (1183), Expect = e-127
 Identities = 231/355 (65%), Positives = 261/355 (73%), Gaps = 15/355 (4%)
 Frame = +1

Query: 211  MDYGEGRFVNGNVVEIIPQAQEPDNWINDQSIWATEDDYNVWNADDRGG----------- 357
            MDY       GNVV +I      +NW  +  +WATED+Y  WN    G            
Sbjct: 1    MDYS-----GGNVVHVISGTSN-ENWPGE--VWATEDEYRAWNNGGDGSVDTPSNSSYDQ 52

Query: 358  ----TQSGGEPPNKKSRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNC 525
                ++SG EPPNKKSR   SSQ   V   NR++AIGKMFFKTKLCCKFR GTCPYITNC
Sbjct: 53   RQSQSRSGSEPPNKKSR---SSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNC 107

Query: 526  NFAHGIEELRKPPPNWQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHC 705
            NFAH IEELR+PP NWQEIVAA ++E+ V  EPREE QIP L ++  G+ESQRSYKGRHC
Sbjct: 108  NFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHC 167

Query: 706  KKFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGVNGQSQKPSNWKTRIC 885
            KKFYTEEGCPYGD+CTFLHDEQSK RESVAIS G     G G   NG + KPSNWKTRIC
Sbjct: 168  KKFYTEEGCPYGDSCTFLHDEQSKNRESVAISFGG--GGGGGGSGNGSNTKPSNWKTRIC 225

Query: 886  NKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGVSLKMPMDTV 1065
            NKWE+TGYCPFG+KCHFAHG  ELHRYGGGL++ E RD ++APPDLKQ GV  K P DT+
Sbjct: 226  NKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQ-GVLPKAPGDTL 284

Query: 1066 VVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWIDDNE 1230
            V S  SAPH+DVYH+ VPSQRS+++ QRPG R  QKWKGPDKISRIYGDWIDD E
Sbjct: 285  VASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDIE 339


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223532956|gb|EEF34722.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 349

 Score =  457 bits (1176), Expect = e-126
 Identities = 227/364 (62%), Positives = 255/364 (70%), Gaps = 24/364 (6%)
 Frame = +1

Query: 211  MDYGEGRFVNGNVVEIIPQAQEPDNWINDQS----IWATEDDYNVWNADDRGG------- 357
            MDY        NVV +IP    PDNW+ + +    +WATEDDY +WN  D          
Sbjct: 1    MDYSRD-----NVVHVIP-GTGPDNWLPNSADSGVVWATEDDYQMWNNSDGPNDNTPSNS 54

Query: 358  ---TQSGGEPPNKKSRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNCN 528
               ++SG EPPNKKS+             +  ++IGKMFFKTKLCCKFR GTCPYITNCN
Sbjct: 55   SFQSRSGSEPPNKKSKNNSQEL-------SSKKSIGKMFFKTKLCCKFRAGTCPYITNCN 107

Query: 529  FAHGIEELRKPPPNWQEIVAAQDDERGVSLEPREEHQIPCLISTGVGTESQRSYKGRHCK 708
            FAH IEELR+PPPNWQEIVAA ++ERG  +E REE QIP +   G   ESQRSYKGRHCK
Sbjct: 108  FAHSIEELRRPPPNWQEIVAAHEEERGNVMEVREEFQIPSI--GGFSGESQRSYKGRHCK 165

Query: 709  KFYTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGVNGQSQ----------K 858
            KFYTEEGCPYGDNCTFLHDEQSK RESVAISLGP    G G G  G             K
Sbjct: 166  KFYTEEGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGGGGGGAGSGNGSGGGSAGNVK 225

Query: 859  PSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLKQVGV 1038
            PSNWKTRICNKWE+TGYCPFG+KCHFAHG  ELHRYGGGL++ EG+D +S P D KQ GV
Sbjct: 226  PSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKDPSSVPADTKQGGV 285

Query: 1039 SLKMPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPGMRPMQKWKGPDKISRIYGDWI 1218
              K P D VV S +S PH+DVYH+GVPSQR S++ QRPG R  QKWKGPDKISRIYGDWI
Sbjct: 286  LSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSHQKWKGPDKISRIYGDWI 345

Query: 1219 DDNE 1230
            DD E
Sbjct: 346  DDIE 349


>gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
          Length = 367

 Score =  455 bits (1171), Expect = e-125
 Identities = 232/370 (62%), Positives = 262/370 (70%), Gaps = 41/370 (11%)
 Frame = +1

Query: 244  NVVEIIPQAQEPDNWIN------DQSIWATEDDYNV-WNADDRGG--TQSGGE--PPNKK 390
            N + IIP A  PD W N      D  IWATEDDYN  WNAD  GG  +++G E  PP KK
Sbjct: 5    NAIHIIPDAAGPDAWANAAAQGGDAGIWATEDDYNSQWNADGGGGGSSRAGSEQPPPGKK 64

Query: 391  SRGGDSSQFGGVDPGNRARAIGKMFFKTKLCCKFRNGTCPYITNCNFAHGIEELRKPPPN 570
            SRGG   + GG    +++RAIGKMFFKTKLCCKFR GTCPY+TNCNFAHG+EELRKPPPN
Sbjct: 65   SRGGGGGEGGGNT--SKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPN 122

Query: 571  WQEIVAAQDDERGVSLEPREEHQIPCLISTGV------------GTESQRSYKGRHCKKF 714
            WQEIVAA ++    + E REEHQIP + S+G             G  S R+YKGRHCKKF
Sbjct: 123  WQEIVAAHEE----ATEAREEHQIPIMTSSGPTAGGDAGGGGGGGGGSGRAYKGRHCKKF 178

Query: 715  YTEEGCPYGDNCTFLHDEQSKARESVAISLGPSMSNGYGNGV----------------NG 846
            YT+EGCPYGD CTFLHDEQSKARESVAISL PS+  G G G                 NG
Sbjct: 179  YTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAASASAAAGNG 238

Query: 847  QSQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGLGELHRYGGGLVDMEGRDVASAPPDLK 1026
              QKPSNWKTRICNKWEMTGYCPFGSKCHFAHG  ELH+YGGGLVD++ RD A+A PD K
Sbjct: 239  PMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRD-AAATPDSK 297

Query: 1027 QVGVSLKMPMDTVVVSTSSAPHADVYHMGVPSQRSSVINQRPG--MRPMQKWKGPDKISR 1200
            Q  VS K P +T   ST+  PHADVYH+GV +QRS++  QR G   RP+QKWKGPDKISR
Sbjct: 298  QAVVSAKAPAETTAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISR 357

Query: 1201 IYGDWIDDNE 1230
            IYGDWID+ E
Sbjct: 358  IYGDWIDETE 367